CN186411
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: YDAP_BACSU (Putative thiamine pyrophosphate-containing protein ydaP OS=Bacillus subtilis GN=ydaP PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.543e-15 Identity = 66/239 (27.62%), Postives = 108/239 (45.19%), Query Frame = 3 Query: 3 IAADGYARSRG-VGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRC---FQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIF 707 +AA A+ G +G C+ G + +LN + A ++ P++ I G +S + G D+ QE++ F+ V + V++ E +L++ A+ TA + +SV+ +L A REPV S N ++N A KP+++AG M+ AK +E AD + V AKG+VP+ HPHF+G G + T E +E D + G F Sbjct: 57 LAAAAEAKLTGKIGVCLSIAGPGAVHLLNGLYDAKADGAPVLAIAGQVSSGEVGR-----------DYFQEIKLEQMFEDVAVFNREVHSAESLPDLLNQAIRTAYSKKGVAVLSVSDDLFA---EKIKREPVYTSPVYIEGNLEPKKEQLVTCAQYINNAKKPIILAGQGMKKAK--RELLEFADKAAAPIVVTLPAKGVVPDKHPHFLGNL-GQIGTKPAYEAMEECDLLIMLGTSF 278
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: DCIP_AZOBR (Indole-3-pyruvate decarboxylase OS=Azospirillum brasilense GN=ipdC PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.910e-14 Identity = 65/238 (27.31%), Postives = 100/238 (42.02%), Query Frame = 3 Query: 6 AADGYAR-SRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLS-NEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFND 713 AAD AR S +G VT+ G +++NA+AGAY+E P++ I G P + + +LHH D + + F+ +T QA +++ A I + A S+PVY+ IP + E P P + L + A PVL+ ++R ELA G V +GL+ + +GTY G A +VE +D G I +D Sbjct: 54 AADAAARYSSTLGVAAVTYGAGAFNMVNAVAGAYAEKSPVVVISGAPGTTEGNAGLLLHHQGRTLD--TQFQVFKEITVAQARLDDPAKAPAEIARVLGAARALSRPVYLE-------IPRNMVNAEVEPVGDDPAWPVDRDALAACADEVLAAMRSATSPVLMVCVEVRRYGLEAKVAELAQRLGVPVVTTFMGRGLLADAPTPPLGTYIGVAGDAEITRLVEESDGLFLLGAILSD 282 The following BLAST results are available for this feature:
BLAST of CN186411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186411 ID=CN186411; Name=CN186411; organism=Citrus sinensis; type=EST; length=719bpback to top |