CN186406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186406 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.334e-16 Identity = 48/118 (40.68%), Postives = 68/118 (57.63%), Query Frame = 3 Query: 117 GADDSADNKSFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 470 G+ S+ F + R + A AG D KE P ++VF D+PGLK ++KV+V+D N+L IS ++ R+ER GKF+R+F LP+NA E I A ++GVLTVTV Sbjct: 27 GSGGSSSGSIFPSFPRGASSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASMENGVLTVTV 144
BLAST of CN186406 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16 Identity = 45/104 (43.27%), Postives = 61/104 (58.65%), Query Frame = 3 Query: 159 TRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 470 T +D A D +E P ++VF D+PGLK ++KV+VED N+L IS + R+ER GKFMR+F LPENA VE + A ++GVL+VTV Sbjct: 36 TNAPAKDVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTV 139
BLAST of CN186406 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16 Identity = 45/98 (45.92%), Postives = 61/98 (62.24%), Query Frame = 3 Query: 177 DAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 470 + A A T D KE P ++VF D+PGLK ++KV+VE+D VL IS + R+ER GKFMR+F LPENA ++ + A ++GVLTVTV Sbjct: 40 ETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTV 137
BLAST of CN186406 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.882e-16 Identity = 45/99 (45.45%), Postives = 62/99 (62.63%), Query Frame = 3 Query: 174 RDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 470 ++ A A T D KE P ++VF D+PGLK ++KV+VE+ VL IS K+ R+E GKF+R+F LPENANV+ + A ++GVLTVTV Sbjct: 44 KETAAFANTHIDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGVLTVTV 142
BLAST of CN186406 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16 Identity = 46/105 (43.81%), Postives = 61/105 (58.10%), Query Frame = 3 Query: 156 PTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 470 P + A A D KE P ++VF D+PG+K ++KV+VED NVL IS + R+ER G+FMRKF LPENA V+ + A ++GVLTVTV Sbjct: 41 PRSETAAETAAFANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENGVLTVTV 145
BLAST of CN186406 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15 Identity = 46/107 (42.99%), Postives = 62/107 (57.94%), Query Frame = 3 Query: 150 NAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 470 NAP D A D +E P ++VF D+PGL+ ++KV+VED N+L IS K+ R+ER GKF R+F LPENA +E I A ++GVL+VTV Sbjct: 38 NAPAM----DVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTV 140
BLAST of CN186406 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.286e-15 Identity = 42/99 (42.42%), Postives = 60/99 (60.61%), Query Frame = 3 Query: 174 RDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 470 ++ A T D KE P ++VF D+PGLK ++KV++E+ VL IS K+ R+ER GKF+R+F LPENA V+ + A +GV+TVTV Sbjct: 42 KETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTV 140
BLAST of CN186406 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.292e-15 Identity = 43/98 (43.88%), Postives = 61/98 (62.24%), Query Frame = 3 Query: 177 DAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 470 + A A D KE P ++VF D+PG+K ++KV+VED NVL++S K+ R+ER GKF+R+F L E+A VE + A ++GVLTVTV Sbjct: 37 ETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTV 134
BLAST of CN186406 vs. ExPASy Swiss-Prot
Match: HS186_ORYSJ (18.6 kDa class III heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.6 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.249e-14 Identity = 43/101 (42.57%), Postives = 59/101 (58.42%), Query Frame = 3 Query: 195 GTPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLI-------SXXXXXXXXXXXAKYVRMERRVG--KFMRKFVLPENANVEAISAVCQDGVLTVTV 470 G P D+ E P Y F++D+PGL DI+V +E+D VL++ + KY+R+ERR F RKF LPE+A+ ISA C++GVLTVTV Sbjct: 54 GAPVDIMETPGEYAFVLDVPGLSKSDIQVTLEEDRVLVMKSSNGAGNGKRKREEEEGECKYIRLERRASPRAFARKFRLPEDADTGGISARCENGVLTVTV 154
BLAST of CN186406 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14 Identity = 41/102 (40.20%), Postives = 66/102 (64.71%), Query Frame = 3 Query: 174 RDAKAMAGTPA--DVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVD 473 +D +MA +PA D KE P +V ++D+PGLK +IKV+VE++ VL +S + R+ER GKF R+F LP+N +++++ A ++GVLT+T+D Sbjct: 57 KDEASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLD 158 The following BLAST results are available for this feature:
BLAST of CN186406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186406 ID=CN186406; Name=CN186406; organism=Citrus sinensis; type=EST; length=700bpback to top |