CN186399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSX_YEAST (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial OS=Saccharomyces cerevisiae GN=YJL045W PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.139e-27 Identity = 66/138 (47.83%), Postives = 88/138 (63.77%), Query Frame = -2 Query: 284 KIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWE--NEKVRLDYRPVHMNTLDD-EIESFPPKARVY 688 +IRLNMQR MQ + +VFRTQ+TL+EG + I + ++F DV ++D+S+IWN+D A T SA RKESRGAHARED+ KRDD NW KHTL + + + V++ YR V +TLD+ E PP R Y Sbjct: 497 QIRLNMQRTMQKDVSVFRTQDTLDEGVRNITEVDKTFEDVHVSDKSMIWNSDLVETLELQNLLTCATQTAVSASKRKESRGAHAREDYAKRDDVNWRKHTLSWQKGTSTPVKIKYRNVIAHTLDENECAPVPPAVRSY 634
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSA_YEAST (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Saccharomyces cerevisiae GN=SDH1 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.648e-27 Identity = 68/139 (48.92%), Postives = 87/139 (62.59%), Query Frame = -2 Query: 284 KIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENE---KVRLDYRPVHMNTLDD-EIESFPPKARVY 688 +IR+NM++ MQ + +VFRTQ +L+EG + I ++F DVK TDRS+IWN+D A T SA RKESRGAHARED+ RDDE+WMKHTL W+ + V L YR V +TLD+ E S PP R Y Sbjct: 503 EIRMNMKQTMQKDVSVFRTQSSLDEGVRNITAVEKTFDDVKTTDRSMIWNSDLVETLELQNLLTCASQTAVSAANRKESRGAHAREDYPNRDDEHWMKHTLS-WQKDVAAPVTLKYRRVIDHTLDEKECPSVPPTVRAY 640
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSAA_XENLA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit A, mitochondrial OS=Xenopus laevis GN=sdha-A PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.127e-27 Identity = 67/153 (43.79%), Postives = 87/153 (56.86%), Query Frame = -2 Query: 284 KIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDD-----------------ENWMKHTLGYWENE-KVRLDYRPVHMNTLDDEIESFPPKARVY 688 +IR+NMQ+ MQN+AAVFRT L+EGC+ + S D+K DR ++WNTD A T++ AEARKESRGAHARED+ R D E+W KHTL Y + + KV L+YRPV TL+++ S PP R Y Sbjct: 513 EIRINMQKTMQNHAAVFRTGSVLKEGCEKLSVINSSMDDIKTFDRGIVWNTDLVETLELQNLMLCALQTINGAEARKESRGAHAREDYKVRIDEYDFSKPLQGQQKKSFNEHWRKHTLSYVDKKGKVSLEYRPVIDTTLNEDCASVPPAIRSY 665
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSA_DANRE (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Danio rerio GN=sdha PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.061e-26 Identity = 70/155 (45.16%), Postives = 92/155 (59.35%), Query Frame = -2 Query: 284 KIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDE-----------------NWMKHTLGYWENE--KVRLDYRPVHMNTLD-DEIESFPPKARVY 688 +IRLNMQ+ MQ++AAVFRT + L+EGC ++ ++S D+K DR ++WNTD NA T+ SAEARKESRGAHAREDF R DE +W KHTL Y + E KV L+YRPV ++LD ++ + PP R Y Sbjct: 507 EIRLNMQKTMQSHAAVFRTGDVLKEGCVKMESVYKSMDDIKTFDRGIVWNTDLVETLELQNLMLNAVQTIVSAEARKESRGAHAREDFKDRVDEYDYSKPLQGQVKKPFEQHWRKHTLSYVDPETGKVTLEYRPVIDSSLDAEDCAAIPPAIRSY 661
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSA_XENTR (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Xenopus tropicalis GN=sdha PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.365e-26 Identity = 65/153 (42.48%), Postives = 87/153 (56.86%), Query Frame = -2 Query: 284 KIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDD-----------------ENWMKHTLGYWENE-KVRLDYRPVHMNTLDDEIESFPPKARVY 688 ++R+NMQ+ MQN+AAVFRT L+EGC+ + + D+K DR ++WNTD A T++ AEARKESRGAHARED+ R D E+W KHTL Y + + KV L+YRPV TL+++ S PP R Y Sbjct: 513 ELRINMQKTMQNHAAVFRTGSVLKEGCEKLSAINSTMDDIKTFDRGIVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDEYDYSKPIQGQQKKSFSEHWRKHTLSYVDGKGKVSLEYRPVIDTTLNEDCVSVPPAIRSY 665
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSAB_XENLA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit B, mitochondrial OS=Xenopus laevis GN=sdha-B PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.268e-26 Identity = 66/153 (43.14%), Postives = 88/153 (57.52%), Query Frame = -2 Query: 284 KIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDD-----------------ENWMKHTLGYWENE-KVRLDYRPVHMNTLDDEIESFPPKARVY 688 ++RLNMQ+ MQ +AAVFRT L+EGC+ + + D+K DR ++WNTD A T++SAEARKESRGAHARED+ R D E+W KHTL Y +++ KV L+YRPV TL+++ S PP R Y Sbjct: 513 ELRLNMQKTMQTHAAVFRTGSVLKEGCEKLSVINSAMDDLKTFDRGIVWNTDVVETLELQNLMLCALQTINSAEARKESRGAHAREDYKTRIDEYDYSKPIQGQQKKSFSEHWRKHTLSYVDSKGKVSLEYRPVIDATLNEDCASVPPAIRSY 665
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSA_SCHPO (Probable succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Schizosaccharomyces pombe GN=sdh1 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.174e-25 Identity = 63/139 (45.32%), Postives = 89/139 (64.03%), Query Frame = -2 Query: 284 KIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWEN---EKVRLDYRPVHMNTLDD-EIESFPPKARVY 688 +IRL+MQ+ MQ + +VFR +ETL+EG + I + ++ D+ + DR LIWNTD A T ++A RKESRGAHARED+ +RDD+NW+KHTL W++ + V L YR V T+D+ E++ PP RVY Sbjct: 504 EIRLDMQKTMQRDVSVFRMEETLQEGVKNIARVDGTYKDIGIRDRGLIWNTDLVEALELRNLLTCAVQTANAALNRKESRGAHAREDYPERDDKNWIKHTL-TWQHKTGDPVTLKYRAVTRTTMDENEVKPVPPFKRVY 641
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSA_DROME (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Drosophila melanogaster GN=Scs-fp PE=2 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 2.614e-25 Identity = 66/153 (43.14%), Postives = 89/153 (58.17%), Query Frame = -2 Query: 284 IRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDE-----------------NWMKHTLGYW--ENEKVRLDYRPVHMNTLDDEIESFPPKARVY 685 +RL MQ+ MQ++AAVFR L++G + + ++ F D+K+ DRSLIWN+D NA +T+ SAEARKESRGAHAREDF R+DE +W KHTL + +N + LDYR V TLD+E+ + PP R Y Sbjct: 509 LRLKMQKTMQHHAAVFRDGPILQDGVNKMKEIYKQFKDIKVVDRSLIWNSDLVETLELQNLLANAQMTIVSAEARKESRGAHAREDFKVREDEYDFSKPLDGQQKKPMDQHWRKHTLSWVCNDNGDITLDYRNVIDTTLDNEVSTVPPAIRSY 661
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSA_MOUSE (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Mus musculus GN=Sdha PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.435e-23 Identity = 64/155 (41.29%), Postives = 85/155 (54.84%), Query Frame = -2 Query: 284 KIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDD-----------------ENWMKHTLGYWE--NEKVRLDYRPVHMNTLDD-EIESFPPKARVY 688 ++RLNMQ+ MQN+AAVFR L+EGC+ I + + +K DR ++WNTD A T++ AEARKESRGAHARED+ R D E+W KHTL Y + KV L+YRPV TL++ + + PP R Y Sbjct: 510 ELRLNMQKSMQNHAAVFRVGSVLQEGCEKISQLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRVDEYDYSKPIQGQQKKPFGEHWRKHTLSYVDIKTGKVTLEYRPVIDKTLNEADCATVPPAIRSY 664
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSA_RAT (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus GN=Sdha PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.196e-23 Identity = 62/155 (40.00%), Postives = 86/155 (55.48%), Query Frame = -2 Query: 284 KIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDD-----------------ENWMKHTLGYWENE--KVRLDYRPVHMNTLDD-EIESFPPKARVY 688 ++RL+MQ+ MQ++AAVFR L+EGC+ + + + +K DR ++WNTD A T++ AEARKESRGAHARED+ R D E+W KHTL Y + + KV LDYRPV TL++ + + PP R Y Sbjct: 502 ELRLSMQKSMQSHAAVFRVGSVLQEGCEKVSQLYGDLQHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDEYDYSKPIEGQQKKPFAEHWRKHTLSYVDTKTGKVTLDYRPVIDKTLNEADCATVPPAIRSY 656 The following BLAST results are available for this feature:
BLAST of CN186399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186399 ID=CN186399; Name=CN186399; organism=Citrus sinensis; type=EST; length=689bpback to top |