CX674980

Overview
NameCX674980
Unique NameCX674980
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 7.867e-25
Identity = 80/231 (34.63%), Postives = 121/231 (52.38%), Query Frame = 1
Query:  130 STVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL-ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 816
            + V+ F    A V +AD+ +  G+ + +    +    F   D+T E     AV+  V  FG LD+++NNAGI   AP   I E +LS++ KV  +N+ G+F   KHA + M+   KG II+ CSV G +      AY  SK  VL L K++A +  K+ IRVNCV P  + T L   + L   E T + +   +  V     +   E    ++AN +LFLASD + Y++G+
Sbjct:   20 AAVQAFLGQQANVVVADIDEAQGEAMVRKENNDR-LHFVQTDITDEAACQHAVESAVHTFGGLDVLINNAGIEIVAP---IHEMELSDWNKVLQVNLTGMFLMSKHALKHMLAAGKGNIINTCSVGGLVAWPDIPAYNASKGGVLQLTKSMAVDYAKHQIRVNCVCPGIIDTPLNEKSFLENNEGTLEEIKKEKAKVNPLLRLGKPE----EIANVMLFLASDLSSYMTGS 242          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.342e-24
Identity = 81/228 (35.53%), Postives = 120/228 (52.63%), Query Frame = 1
Query:  142 LFHKHGAKVCIADVQDNLGQQVCQ---SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 816
            +F + GAKV I D+ +  G++  +   S+GGE    F   DV K+ +    V  TVE FG LDI+VNNAGI   P  +I E    +F+K   +NVKG F   K+A   M  Q  G I+++ S AG IG      Y+ SK A+LGL +++A +   YGIRVN V P    +   +A +      E+ +    + +       G E    ++A A+LF A DEA +++G+
Sbjct:   24 MFAERGAKVAINDISEEKGKETVELIKSMGGE--AAFIFGDVAKDAE--QIVKKTVETFGRLDILVNNAGI--VPYGNIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQGGGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVDYVDYGIRVNAVCPGTTQSEGLMARVKASPNPEELLKKMTSRIP--MKRLGKE---EEIAFAILFAACDEAGFMTGS 240          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: HCDR_XANP2 (2-(R)-hydroxypropyl-CoM dehydrogenase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=xecD PE=1 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 1.342e-24
Identity = 70/189 (37.04%), Postives = 106/189 (56.08%), Query Frame = 1
Query:  253 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLASDEARYISG 813
            DV  E DV +A+  T+E+FG +D++VNNAGI+G +    +    + +F+KV  +NV+G+F G +     M+ Q  G I++I SVA  +   G  AYT SK AVL L K+VA +    GIR N V P  + T +    L + E  +  +          A +   E+ TA  VA+AV+FLA ++A Y++G
Sbjct:   60 DVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVL----------ARIPQKEIGTAAQVADAVMFLAGEDATYVNG 238          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: CPNA_COMTE (Cyclopentanol dehydrogenase OS=Comamonas testosteroni GN=cpnA PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.099e-24
Identity = 76/228 (33.33%), Postives = 113/228 (49.56%), Query Frame = 1
Query:  142 LFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 816
            L  + GA V ++D+ + LG Q    +   GG+    F H DVT E     AVD  + +   LD +VNNAGI       +++    E++++F+INV+ VF G +     M    KG I+++ S+ G +G  G  AY  SK AV    K  A +L  + IRVN V P  +AT       P  ++  DA    R  +     + G      +V+ AVLFL SDEA ++ G+
Sbjct:   25 LLAREGATVYLSDMNEELGHQAVAEIRRQGGK--AHFLHLDVTNENHWTGAVDTILAESDRLDALVNNAGI--LTLKPVQDTSNEEWDRIFEINVRSVFLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIAT-------PMTQQILDAPQSARALL--GPTLLGRAAQPMEVSQAVLFLVSDEASFVHGS 239          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: CPNA_COMS9 (Cyclopentanol dehydrogenase OS=Comamonas sp. (strain NCIMB 9872) GN=cpnA PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.099e-24
Identity = 76/228 (33.33%), Postives = 113/228 (49.56%), Query Frame = 1
Query:  142 LFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 816
            L  + GA V ++D+ + LG Q    +   GG+    F H DVT E     AVD  + +   LD +VNNAGI       +++    E++++F+INV+ VF G +     M    KG I+++ S+ G +G  G  AY  SK AV    K  A +L  + IRVN V P  +AT       P  ++  DA    R  +     + G      +V+ AVLFL SDEA ++ G+
Sbjct:   25 LLAREGATVYLSDMNEELGHQAVAEIRRQGGK--AHFLHLDVTNENHWTGAVDTILAESDRLDALVNNAGI--LTLKPVQDTSNEEWDRIFEINVRSVFLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIAT-------PMTQQILDAPQSARALL--GPTLLGRAAQPMEVSQAVLFLVSDEASFVHGS 239          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.317e-23
Identity = 78/232 (33.62%), Postives = 121/232 (52.16%), Query Frame = 1
Query:  130 STVRLFHKHGAKVCIADV-QDNLGQQV--CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            +T  LF + GA V   D+ ++NL   V   + L G+ D +  +  VT  + +   V+  V+K+G +D++VNNAGI+  A    ++E D   ++ V ++N+KGVF+  +     MI Q  G+I+++ SV G  G  G   Y  SK  V+G+ K  A EL    IRVN V+P  + T +    LPE+ R            A +    G      +VA  +LFLASDE+ Y++G
Sbjct:   20 ATTLLFAQEGATVIAGDISKENLDSLVKEAEGLPGKVDPYVLN--VTDRDQIKEVVEKVVQKYGRIDVLVNNAGITRDALLVRMKEED---WDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVNAVAPGFIETPMT-EKLPEKARE----------TALSRIPLGRFGKPEEVAQVILFLASDESSYVTG 235          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: YXJF_BACSU (Uncharacterized oxidoreductase yxjF OS=Bacillus subtilis GN=yxjF PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.256e-22
Identity = 76/227 (33.48%), Postives = 112/227 (49.34%), Query Frame = 1
Query:  139 RLFHKHGAKVCIADVQDNLGQQVCQSLGGEP-DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMV-GFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            R F + GA V ++D++    ++    L  E  D      DVTKE  V   V++  +++G LDI+VNNAGI       I E     FE++  + +   F  MKH   IM  Q  G II+I SV G +G  G  AY  +KH V+GL K  A E   +GI VN + P  V T L    L +  +T +         V      Q   L+  ++A+  +FLAS++A+ ++G
Sbjct:   21 REFAREGASVIVSDLRPEACEKAASKLAEEGFDAAAIPYDVTKEAQVADTVNVIQKQYGRLDILVNNAGIQHVA--PIEEFPTDTFEQLIKVMLTAPFIAMKHVFPIMKKQQFGRIINIASVNGLVGFAGKSAYNSAKHGVIGLTKVGALEGAPHGITVNALCPGYVDTQLVRNQLSDLSKTRNVPYDSVLEQVIFPLVPQKRLLSVKEIADYAVFLASEKAKGVTG 245          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.256e-22
Identity = 68/197 (34.52%), Postives = 104/197 (52.79%), Query Frame = 1
Query:  232 DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALA---HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            D+F    +V   ++V + +   V +FG+LD++VNNAGI+      +      E++ V D N+KGVF+ ++ A   M+ Q  G II++ SV GA+G  G   Y  +K  V+GL K+ A EL   GI VN V+P  + + +  A    L E+  T+  +  F                  D+AN V FLASD+A+YI+G
Sbjct:   55 DSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQ--------------DTDIANTVAFLASDKAKYITG 235          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.256e-22
Identity = 68/197 (34.52%), Postives = 104/197 (52.79%), Query Frame = 1
Query:  232 DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALA---HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            D+F    +V   ++V + +   V +FG+LD++VNNAGI+      +      E++ V D N+KGVF+ ++ A   M+ Q  G II++ SV GA+G  G   Y  +K  V+GL K+ A EL   GI VN V+P  + + +  A    L E+  T+  +  F                  D+AN V FLASD+A+YI+G
Sbjct:   55 DSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQ--------------DTDIANTVAFLASDKAKYITG 235          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.256e-22
Identity = 68/197 (34.52%), Postives = 104/197 (52.79%), Query Frame = 1
Query:  232 DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALA---HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            D+F    +V   ++V + +   V +FG+LD++VNNAGI+      +      E++ V D N+KGVF+ ++ A   M+ Q  G II++ SV GA+G  G   Y  +K  V+GL K+ A EL   GI VN V+P  + + +  A    L E+  T+  +  F                  D+AN V FLASD+A+YI+G
Sbjct:   55 DSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQ--------------DTDIANTVAFLASDKAKYITG 235          
The following BLAST results are available for this feature:
BLAST of CX674980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
BACC_BACSU7.867e-2534.63Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
Y325_THEMA1.342e-2435.53Uncharacterized oxidoreductase TM_0325 OS=Thermoto... [more]
HCDR_XANP21.342e-2437.042-(R)-hydroxypropyl-CoM dehydrogenase OS=Xanthobac... [more]
CPNA_COMTE5.099e-2433.33Cyclopentanol dehydrogenase OS=Comamonas testoster... [more]
CPNA_COMS95.099e-2433.33Cyclopentanol dehydrogenase OS=Comamonas sp. (stra... [more]
FABG_THEMA4.317e-2333.623-oxoacyl-[acyl-carrier-protein] reductase OS=Ther... [more]
YXJF_BACSU1.256e-2233.48Uncharacterized oxidoreductase yxjF OS=Bacillus su... [more]
FABG_STAAW1.256e-2234.523-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAS1.256e-2234.523-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAR1.256e-2234.523-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_9H02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9H02-O3-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674980 ID=CX674980; Name=CX674980; organism=Citrus sinensis; type=EST; length=820bp
GGCAATAGTTTTATTGTGTGAAATGTTCTACGTCTTCCTAAATGGCCTTA
GACGTGTTTTCTTTTCCTAACATTTTGTTGGTATAATTATTTTGTTTTAC
TTATTGTTTTAATAATTTAGATGGTTATGAGCACTGTACGCCTATTCCAC
AAGCATGGTGCAAAAGTTTGCATTGCAGATGTGCAAGACAATCTTGGTCA
GCAGGTCTGTCAATCCCTTGGTGGTGAGCCAGACACTTTTTTTTGCCATT
GTGATGTCACAAAGGAGGAAGATGTTTGCTCTGCTGTTGACCTCACAGTC
GAAAAATTTGGCACACTTGATATCATGGTCAATAATGCTGGCATTTCAGG
GGCTCCTTGTCCTGACATCCGTGAGGCGGACTTATCAGAGTTTGAGAAGG
TATTTGACATAAATGTGAAGGGAGTTTTCCATGGAATGAAGCATGCAGCT
CGGATCATGATCCCACAAACTAAGGGCACTATCATATCAATCTGCAGTGT
TGCAGGTGCCATTGGTGGTCTTGGCCCACATGCCTATACGGGGTCCAAGC
ATGCCGTTTTGGGACTCAACAAGAATGTTGCCGCTGAGCTTGGAAAATAT
GGCATCCGCGTGAACTGTGTTTCTCCTTATGCTGTTGCAACAGGCTTGGC
TTTGGCTCACTTGCCTGAAGAGGAGAGGACAGAGGATGCCATGGTAGGTT
TCCGTAATTTTGTTGCAAGAAATGCTAACATGCAGGGCACGGAGTTGACA
GCTAATGATGTGGCTAACGCTGTTCTCTTCCTAGCAAGTGATGAAGCTAG
GTACATAAGTGGAACGAATC
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