CX674980

Overview
NameCX674980
Unique NameCX674980
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: Y2488_STAAC (Uncharacterized oxidoreductase SACOL2488 OS=Staphylococcus aureus (strain COL) GN=SACOL2488 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.675e-16
Identity = 52/179 (29.05%), Postives = 91/179 (50.84%), Query Frame = 1
Query:  142 LFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER 678
            L H+ GAKV +A       Q V   L  +        DVT +E+V   + +  + FG LDI++N+AG   +    I +  + E++ + D+N+KG  +  + A   M+ Q+ G +I+I S++G         Y+ +K AV  + + +  EL K G++V  +SP  V T +  A+ P + +
Sbjct:   25 LLHEEGAKVVLAGRNKEKLQNVANQLS-QDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQMLSS--KITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITAAYNPTDRK 200          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: Y2422_STAA3 (Uncharacterized oxidoreductase SAUSA300_2422 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2422 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.675e-16
Identity = 52/179 (29.05%), Postives = 91/179 (50.84%), Query Frame = 1
Query:  142 LFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER 678
            L H+ GAKV +A       Q V   L  +        DVT +E+V   + +  + FG LDI++N+AG   +    I +  + E++ + D+N+KG  +  + A   M+ Q+ G +I+I S++G         Y+ +K AV  + + +  EL K G++V  +SP  V T +  A+ P + +
Sbjct:   25 LLHEEGAKVVLAGRNKEKLQNVANQLS-QDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQMLSS--KITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITAAYNPTDRK 200          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_RICBR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia bellii (strain RML369-C) GN=fabG PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.718e-16
Identity = 73/227 (32.16%), Postives = 114/227 (50.22%), Query Frame = 1
Query:  139 RLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCH-CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            R  HK G+ V I+       ++  ++LG +  D +    C++T  E+ CS +   +EK   LDI+V NAGI+      IR  +  +F++V DIN+K  F   + A + M+    G II+I S+ G  G  G   Y  SK  ++G+ K++A E+   GI VN V+P     G   + + ++   E      R         +GT     D+ANAV FLAS ++ YI+G
Sbjct:   24 RQLHKLGSHVIIS----GSNEEKLKALGNDLKDNYTIKVCNLTNTEE-CSNLVAQIEK---LDILVCNAGITKDTLA-IRMKN-EDFDQVIDINLKANFILNREAIKKMMTNRYGRIINITSIVGVSGNPGQANYCASKAGLIGMTKSLAYEVATRGITVNAVAP-----GFIKSDMTDKLNDEQKEAITRKIP------KGTYGMPEDIANAVAFLASKQSSYITG 229          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_BUCBP (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=fabG PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.718e-16
Identity = 54/192 (28.12%), Postives = 94/192 (48.96%), Query Frame = 1
Query:  253 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            D+T   ++   +D   + FG +DI++NNAGI       IR+  L      ++  V ++N+  +F+  K   R MI   +G II+I SV   IG  G   Y+ +K  ++G +K++A EL   GI VN ++P  + TG+      ++     + +  +              T  +++   LFL S++A YI+G
Sbjct:   60 DITNPNEITKTMDFVYKNFGRVDILINNAGI-------IRDKLLINMKTQDWNSVLNVNLNSIFYMSKSVIRNMIKNKQGKIITIGSVIAHIGNCGQTNYSAAKLGLVGFHKSLALELAPKGITVNMIAPGLIKTGMTNNLSQKQLSKYLSKIPMKRLG-----------TIKEISKITLFLISNDANYITG 233          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: HCD2_HUMAN (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Homo sapiens GN=HSD17B10 PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 1.139e-15
Identity = 60/182 (32.97%), Postives = 97/182 (53.30%), Query Frame = 1
Query:  157 GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP-DIREAD---LSEFEKVFDINVKGVFHGMKHAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE 672
            GA   + D+ ++ G+   + LG   +  F   DVT E+DV +A+ L   KFG +D+ VN AGI+ A    ++++     L +F++V D+N+ G F+ ++  A  M          +G II+  SVA   G +G  AY+ SK  ++G+   +A +L   GIRV  ++P    T L L  LPE+
Sbjct:   34 GASAVLLDLPNSGGEAQAKKLGN--NCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL-LTSLPEK 212          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_MYCS2 (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium smegmatis GN=fabG PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.139e-15
Identity = 66/199 (33.17%), Postives = 100/199 (50.25%), Query Frame = 1
Query:  220 GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            G   D F   CDVT    V  A     E  G ++++V NAGIS      +       FE+V + N+ G F   + A+R M  +  G II I SV+G + G+G  A Y  +K  ++G+ ++++ EL K G+  N V+P  + T +  A    +ER +   + F    A+         TA +VA AV FLAS++A YI+G
Sbjct:   58 GAPDDLFGVQCDVTDSAAVDRAFKEVEEHQGPVEVLVANAGISKDAF--LMRMTEERFEEVINTNLTGAFRCAQRASRTMQRKRFGRIIFIGSVSG-MWGIGNQANYAAAKAGLIGMARSISRELAKAGVTANVVAPGYIDTEMTRA---LDERIQAGALDF--IPAKRVG------TAEEVAGAVSFLASEDASYIAG 242          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: HCD2_MOUSE (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Mus musculus GN=Hsd17b10 PE=1 SV=4)

HSP 1 Score: 83.5741 bits (205), Expect = 1.487e-15
Identity = 62/193 (32.12%), Postives = 100/193 (51.81%), Query Frame = 1
Query:  130 STVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD----LSEFEKVFDINVKGVFHGMKHAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER 678
            +T +     GA   + DV D+ G+   + LG      F   +VT E+++ +A+ L  EKFG +D+ VN AGI+ A     ++ +    L +F++V ++N+ G F+ ++  A  M          +G II+  SVA   G +G  AY+ SK  + G+   +A +L   GIRV  ++P   AT L L  LPE+ R
Sbjct:   25 ATAKRLVGQGATAVLLDVPDSEGESQAKKLG--ESCIFAPANVTSEKEIQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHQKKNKIHTLEDFQRVINVNLIGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIDGMTLPIARDLAPTGIRVVTIAPGLFATPL-LTTLPEKVR 214          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: NODG_RHIME (Nodulation protein G OS=Rhizobium meliloti GN=nodG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.942e-15
Identity = 67/227 (29.52%), Postives = 110/227 (48.46%), Query Frame = 1
Query:  139 RLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            R+ H  GA V +   Q    + +   LG     F    ++   ++V +           +DI+VNNAGI+      +  AD  +++ V ++N+  +F   +   + MI +  G II++ SVAGAIG  G   Y  SK  ++G +K++A E+    I VNCV+P  + + +   L H  +E          +  VA   +  G   T  +VA+AV +LASD A Y++G
Sbjct:   24 RVLHAQGAIVGLHGTQIEKLETLATELGDRVKLF--PANLANRDEVKALGQRAEADLEGVDILVNNAGITKDGL-FLHMAD-PDWDIVLEVNLTAMFRLTREITQQMIRRRNGRIINVTSVAGAIGNPGQTNYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIESAMTDKLNHKQKE----------KIMVAIPIHRMG---TGTEVASAVAYLASDHAAYVTG 233          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: KDUD_ECOLI (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=kduD PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.942e-15
Identity = 59/193 (30.57%), Postives = 99/193 (51.30%), Query Frame = 1
Query:  253 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEK-----VFDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            D+ K + + + +D  V +FG +DI+VNNAG+       IR  D  EF +     V ++N+K VF   + AA+  I Q  G  II+I S+    GG+   +YT SK  V+G+ + +A E  K+ I VN ++P  +AT        +E+R+ + +         +    G     +D+   ++FLAS  + Y++G
Sbjct:   65 DLRKIDGIPALLDRAVAEFGHIDILVNNAGL-------IRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEIL---------DRIPAGRWGLPSDLMGPIVFLASSASDYVNG 241          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_MYCTU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium tuberculosis GN=fabG PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.942e-15
Identity = 63/198 (31.82%), Postives = 95/198 (47.98%), Query Frame = 1
Query:  220 GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            G     F   CDVT  + V  A     E  G ++++V+NAG+S      +      +FEKV + N+ G F   + A+R M     G +I I SV+G+ G      Y  SK  V+G+ +++A EL K  +  N V+P  + T +  A    +ER +   + F    A+         T  +VA  V FLAS++A YISG
Sbjct:   50 GAPKGLFGVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA---LDERIQQGALQF--IPAKRVG------TPAEVAGVVSFLASEDASYISG 234          
The following BLAST results are available for this feature:
BLAST of CX674980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
Y2488_STAAC6.675e-1629.05Uncharacterized oxidoreductase SACOL2488 OS=Staphy... [more]
Y2422_STAA36.675e-1629.05Uncharacterized oxidoreductase SAUSA300_2422 OS=St... [more]
FABG_RICBR8.718e-1632.163-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_BUCBP8.718e-1628.133-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]
HCD2_HUMAN1.139e-1532.973-hydroxyacyl-CoA dehydrogenase type-2 OS=Homo sap... [more]
FABG_MYCS21.139e-1533.173-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
HCD2_MOUSE1.487e-1532.123-hydroxyacyl-CoA dehydrogenase type-2 OS=Mus musc... [more]
NODG_RHIME1.942e-1529.52Nodulation protein G OS=Rhizobium meliloti GN=nodG... [more]
KDUD_ECOLI1.942e-1530.572-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=E... [more]
FABG_MYCTU1.942e-1531.823-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_9H02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9H02-O3-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674980 ID=CX674980; Name=CX674980; organism=Citrus sinensis; type=EST; length=820bp
GGCAATAGTTTTATTGTGTGAAATGTTCTACGTCTTCCTAAATGGCCTTA
GACGTGTTTTCTTTTCCTAACATTTTGTTGGTATAATTATTTTGTTTTAC
TTATTGTTTTAATAATTTAGATGGTTATGAGCACTGTACGCCTATTCCAC
AAGCATGGTGCAAAAGTTTGCATTGCAGATGTGCAAGACAATCTTGGTCA
GCAGGTCTGTCAATCCCTTGGTGGTGAGCCAGACACTTTTTTTTGCCATT
GTGATGTCACAAAGGAGGAAGATGTTTGCTCTGCTGTTGACCTCACAGTC
GAAAAATTTGGCACACTTGATATCATGGTCAATAATGCTGGCATTTCAGG
GGCTCCTTGTCCTGACATCCGTGAGGCGGACTTATCAGAGTTTGAGAAGG
TATTTGACATAAATGTGAAGGGAGTTTTCCATGGAATGAAGCATGCAGCT
CGGATCATGATCCCACAAACTAAGGGCACTATCATATCAATCTGCAGTGT
TGCAGGTGCCATTGGTGGTCTTGGCCCACATGCCTATACGGGGTCCAAGC
ATGCCGTTTTGGGACTCAACAAGAATGTTGCCGCTGAGCTTGGAAAATAT
GGCATCCGCGTGAACTGTGTTTCTCCTTATGCTGTTGCAACAGGCTTGGC
TTTGGCTCACTTGCCTGAAGAGGAGAGGACAGAGGATGCCATGGTAGGTT
TCCGTAATTTTGTTGCAAGAAATGCTAACATGCAGGGCACGGAGTTGACA
GCTAATGATGTGGCTAACGCTGTTCTCTTCCTAGCAAGTGATGAAGCTAG
GTACATAAGTGGAACGAATC
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