CX674980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: Y2049_STAEQ (Uncharacterized oxidoreductase SERP2049 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP2049 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11 Identity = 40/164 (24.39%), Postives = 83/164 (50.61%), Query Frame = 1 Query: 151 KHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVAT 642 + GA + + + ++ Q L DVT + ++ + ++ FG +DI+VN+AG S + I + ++ +++ + D+N+KG H ++ ++ Q+ G II++ SV+G Y +K A+ + +++ EL + G++V +SP V T Sbjct: 28 QQGASIVLVGRNEQRLNEIAQQLNTPAKVV--SADVTVKSNIDDMLKAVIDHFGHIDIVVNSAGQSLSS--KITDYNVEQWDTMIDVNIKGTLHVLQATLPYLLKQSSGHIINLASVSGFEPTKTNAVYGATKAAIHAITQSLEKELARTGVKVTSISPGMVDT 187
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: Y2036_STAES (Uncharacterized oxidoreductase SE_2036 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_2036 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11 Identity = 40/164 (24.39%), Postives = 83/164 (50.61%), Query Frame = 1 Query: 151 KHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVAT 642 + GA + + + ++ Q L DVT + ++ + ++ FG +DI+VN+AG S + I + ++ +++ + D+N+KG H ++ ++ Q+ G II++ SV+G Y +K A+ + +++ EL + G++V +SP V T Sbjct: 28 QQGASIVLVGRNEQRLNEIAQQLNTPAKVV--SADVTVKSNIDDMLKAVIDHFGHIDIVVNSAGQSLSS--KITDYNVEQWDTMIDVNIKGTLHVLQATLPYLLKQSSGHIINLASVSGFEPTKTNAVYGATKAAIHAITQSLEKELARTGVKVTSISPGMVDT 187
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: PGDH_BOVIN (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Bos taurus GN=HPGD PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11 Identity = 62/222 (27.93%), Postives = 96/222 (43.24%), Query Frame = 1 Query: 157 GAKVCIADVQDNLGQQVCQSLGG--EPD-TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT---KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN--VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 798 GAKV + D G + +L EP T F CDV +E + V+ FG LDI+VNNAG++ +EK IN+ V G M Q G I++ S+AG + Y SKH ++G ++ +AA L G+R+N + P V T + + E+E + + + G L + +AN ++ L D+A Sbjct: 29 GAKVALVDWNLEAGVKCKAALDEQFEPQKTLFIQCDVADQEQLRDTFRKVVDHFGKLDILVNNAGVNNE----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGININMSSLAGLMPVAQQPVYCASKHGIVGFTRSAAMAANLMNSGVRLNAICPGFVDTPILKS--IEKEENMGKYIEYMGPIKDMMKYYGI-LDPSMIANGLITLIEDDA 237
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: ENTA_ECOLI (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS=Escherichia coli (strain K12) GN=entA PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11 Identity = 53/186 (28.49%), Postives = 83/186 (44.62%), Query Frame = 1 Query: 253 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYIS 810 D + VC + E+ LD +VN AGI D + ++++ F +NV G F+ + Q G I+++ S A +G AY SK A+ L +V EL G+R N VSP + T + ++ E + GF + G ++AN +LFLASD A +I+ Sbjct: 55 DAAQVAQVCQRLLAETER---LDALVNAAGILRMGATD--QLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPL-GKIARPQEIANTILFLASDLASHIT 234
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: DHB13_RAT (17-beta hydroxysteroid dehydrogenase 13 OS=Rattus norvegicus GN=Hsd17b13 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11 Identity = 53/176 (30.11%), Postives = 88/176 (50.00%), Query Frame = 1 Query: 145 FHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP-DIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVAAEL---GKYGIRVNCVSPYAVATG 645 F K +++ + D+ + ++ C+ LG F C + ++ +VD ++ G ++I+VNNAG A P D+ E K F++N+ G F +K M+ + G I+++ SV G I L P Y SK A +G ++ + AEL GK GI+ +C+ P V TG Sbjct: 56 FAKQKSRLVLWDISKHGVEETAAKCRKLGAVVHVFVVDC--SNRAEIYKSVDQVKKEVGDIEIVVNNAG---AIYPADLLSTKDEEITKTFEVNILGHFWIIKALLPSMLRRNSGHIVTVASVCGHRVIPYLIP--YCSSKFAAVGFHRALTAELDTLGKTGIKTSCLCPVFVNTG 224 The following BLAST results are available for this feature:
BLAST of CX674980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX674980 ID=CX674980; Name=CX674980; organism=Citrus sinensis; type=EST; length=820bpback to top |