CX674980

Overview
NameCX674980
Unique NameCX674980
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5463 contig Csv1_Contig5463:1..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.891e-21
Identity = 63/194 (32.47%), Postives = 102/194 (52.58%), Query Frame = 1
Query:  232 DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            ++F    +V K ++V   +   V +FG++D++VNNAGI+      +      E++ V D N+KGVF+ ++     M+ Q  G II++ S+ GA+G  G   Y  +K  V+GL K  A EL   GI VN V+P  + + +  A   + +      +  + F        G +    D+AN V FLASD+A+YI+G
Sbjct:   53 ESFAIQANVAKGDEVKEMIKEVVSQFGSVDVLVNNAGITKDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDDLKDQMLEQIPLKRF--------GED---TDIANTVAFLASDKAKYITG 233          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.891e-21
Identity = 63/194 (32.47%), Postives = 102/194 (52.58%), Query Frame = 1
Query:  232 DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            ++F    +V K ++V   +   V +FG++D++VNNAGI+      +      E++ V D N+KGVF+ ++     M+ Q  G II++ S+ GA+G  G   Y  +K  V+GL K  A EL   GI VN V+P  + + +  A   + +      +  + F        G +    D+AN V FLASD+A+YI+G
Sbjct:   53 ESFAIQANVAKGDEVKEMIKEVVSQFGSVDVLVNNAGITKDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDDLKDQMLEQIPLKRF--------GED---TDIANTVAFLASDKAKYITG 233          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: BAIA2_EUBSP (Bile acid 7-dehydroxylase 2 OS=Eubacterium sp. (strain VPI 12708) GN=baiA2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.535e-20
Identity = 76/232 (32.76%), Postives = 112/232 (48.28%), Query Frame = 1
Query:  130 STVRLFHKHGAKVCI-ADVQDNLGQQVCQ--SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 816
            +  ++F  +GAKV I  + Q+ +   + Q   L  E +      D+T  + V +AV    +K+G LD+M+NNAGI+             EF+ + DINV GVF+G   A + M    KG II+  SV G  G L    Y  SK +V+GL   +  E+ +  IRV  V+P  V T +   + PE       M G+   +     ++  E     +AN  LFLASD A  I+ T
Sbjct:   21 AAAKIFIDNGAKVSIFGETQEEVDTALAQLKELYPEEEVLGFAPDLTSRDAVMAAVGQVAQKYGRLDVMINNAGITSNNV--FSRVSEEEFKHIMDINVTGVFNGAWCAYQCMKDAKKGVIINTASVTGIFGSLSGVGYPASKASVIGLTHGLGREIIRKNIRVVGVAPGVVNTDMTNGNPPE------IMEGYLKALPMKRMLEPEE-----IANVYLFLASDLASGITAT 239          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: DHB14_HUMAN (17-beta-hydroxysteroid dehydrogenase 14 OS=Homo sapiens GN=HSD17B14 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.619e-20
Identity = 77/230 (33.48%), Postives = 116/230 (50.43%), Query Frame = 1
Query:  136 VRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL---ALAHLPEEERT-EDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            VR F   GA+V I D  ++ G+ + Q L   P   F  CDVT+E+DV + V  T+ +FG LD +VNNAG    P     E     F ++ ++N+ G +   K A   +  +++G +I+I S+ GAIG      Y  +K AV  + K +A +   YG+RVNC+SP  + T L     A +P+   T  + M+         A   G      +V  A +FLAS EA + +G
Sbjct:   26 VRAFVNSGARVVICDKDESGGRALEQEL---PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRP-EETSAQGFRQLLELNLLGTYTLTKLALPYL-RKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRATIREGML---------AQPLGRMGQPAEVGAAAVFLAS-EANFCTG 240          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: BDHA_RHIME (D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium meliloti GN=bdhA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.467e-20
Identity = 58/193 (30.05%), Postives = 100/193 (51.81%), Query Frame = 1
Query:  253 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER----TEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTN 819
            D+TK  ++   + +  ++FG  DI+VNNAG+       I +  + +++++  +N+   FH ++ A   M  +  G II+I S  G +      AY  +KH ++GL K VA E+ + G+ VN + P  V T L    +P++ R    TE+ ++   N V          +T   VA+  L+LA D+A  I+GT+
Sbjct:   61 DMTKPSEIADMMAMVADRFGGADILVNNAGVQFVE--KIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVI---NEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGTH 248          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.951e-20
Identity = 56/146 (38.36%), Postives = 88/146 (60.27%), Query Frame = 1
Query:  211 QSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL 648
            ++ GG+  TF    DV+KEEDV + +   V+ +GT+DI+VNNAGI+      +     S++++V D+N+ GVF   + AA+IM+ + KG II+I SV G +G  G   Y+ +K  V+G  K VA E     I VN V+P  +++ +
Sbjct:  123 EAFGGQALTF--GGDVSKEEDVEAMIKTAVDAWGTVDILVNNAGITRDGL--LMRMKKSQWQEVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNAGQANYSAAKAGVIGFTKTVAREYASRNINVNAVAPGFISSDM 264          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: UCPA_SALTY (Oxidoreductase ucpA OS=Salmonella typhimurium GN=ucpA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.300e-19
Identity = 76/232 (32.76%), Postives = 113/232 (48.71%), Query Frame = 1
Query:  139 RLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC-HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVF--DINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 816
            R+F +HGA + + D+ D + +++   LGG          DV     V +AV    E  G +DI+VNNAG+    C      D+SE ++ F  DIN+KGV++  K     MI +  G I+ + SV G  +   G  AY  SK A++GL K++A E  + GIRVN + P  V T +A  +A     +  E  +      +         E     V     FLASDE+ Y++GT
Sbjct:   24 RVFARHGANLILLDISDEI-EKLADELGGRGHRCTAVKADVRDFASVQAAVARAKETEGRIDILVNNAGV----CRLGNFLDMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMAKAIPLRRLADPLE-----VGELAAFLASDESSYLTGT 245          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: UCPA_SALTI (Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.300e-19
Identity = 76/232 (32.76%), Postives = 113/232 (48.71%), Query Frame = 1
Query:  139 RLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC-HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVF--DINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 816
            R+F +HGA + + D+ D + +++   LGG          DV     V +AV    E  G +DI+VNNAG+    C      D+SE ++ F  DIN+KGV++  K     MI +  G I+ + SV G  +   G  AY  SK A++GL K++A E  + GIRVN + P  V T +A  +A     +  E  +      +         E     V     FLASDE+ Y++GT
Sbjct:   24 RVFARHGANLILLDISDEI-EKLADELGGRGHRCTAVKADVRDFASVQAAVARAKETEGRIDILVNNAGV----CRLGNFLDMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMAKAIPLRRLADPLE-----VGELAAFLASDESSYLTGT 245          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG5_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic (Fragment) OS=Brassica napus GN=bkr1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.300e-19
Identity = 63/171 (36.84%), Postives = 96/171 (56.14%), Query Frame = 1
Query:  151 KHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL 648
            K G KV +     A   + + +Q+ +  GGE  TF    DV+KE DV S +   V+K+GT+D++VNNAGI+      +     S++++V D+N+ GVF   + A +IM+ + KG II+I SV G IG +G   Y  +K  V+G +K  A E     I VN V P  +A+ +
Sbjct:   96 KAGCKVLVNYARSAKEAEEVSKQI-EEYGGEAITF--GGDVSKEADVDSMMKTAVDKWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM 261          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: YXBG_BACSU (Uncharacterized oxidoreductase yxbG OS=Bacillus subtilis GN=yxbG PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.697e-19
Identity = 69/237 (29.11%), Postives = 118/237 (49.79%), Query Frame = 1
Query:  130 STVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLFLASDEARYISG 813
            +T  +F   GA+V I D+  +  ++   ++   GG+ ++F  H DV+ E  V +  D   +  GT+DI+ NNAG+       + E  +  F+++  ++++G F   K+   +M+ +  G+II+  S++G    L    Y  +K  +  L K +A +  + GIRVN +SP  + T L   LA   E+E  E           R AN   T L       ++A   LFLASD++ Y++G
Sbjct:   21 ATAEVFANEGARVIIGDINKDQMEETVDAIRKNGGQAESF--HLDVSDENSVKAFADQIKDACGTIDILFNNAGVDQEG-GKVHEYPVDLFDRIIAVDLRGTFLCSKYLIPLML-ENGGSIINTSSMSGRAADLDRSGYNAAKGGITNLTKAMAIDYARNGIRVNSISPGTIETPLIDKLAGTKEQEMGEQ---------FREANKWITPLGRLGQPKEMATVALFLASDDSSYVTG 244          
The following BLAST results are available for this feature:
BLAST of CX674980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
FABG_STAES6.891e-2132.473-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAEQ6.891e-2132.473-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
BAIA2_EUBSP1.535e-2032.76Bile acid 7-dehydroxylase 2 OS=Eubacterium sp. (st... [more]
DHB14_HUMAN2.619e-2033.4817-beta-hydroxysteroid dehydrogenase 14 OS=Homo sa... [more]
BDHA_RHIME4.467e-2030.05D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium ... [more]
FABG_CUPLA9.951e-2038.363-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
UCPA_SALTY1.300e-1932.76Oxidoreductase ucpA OS=Salmonella typhimurium GN=u... [more]
UCPA_SALTI1.300e-1932.76Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE... [more]
FABG5_BRANA1.300e-1936.843-oxoacyl-[acyl-carrier-protein] reductase 5, chlo... [more]
YXBG_BACSU1.697e-1929.11Uncharacterized oxidoreductase yxbG OS=Bacillus su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_9H02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9H02-O3-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674980 ID=CX674980; Name=CX674980; organism=Citrus sinensis; type=EST; length=820bp
GGCAATAGTTTTATTGTGTGAAATGTTCTACGTCTTCCTAAATGGCCTTA
GACGTGTTTTCTTTTCCTAACATTTTGTTGGTATAATTATTTTGTTTTAC
TTATTGTTTTAATAATTTAGATGGTTATGAGCACTGTACGCCTATTCCAC
AAGCATGGTGCAAAAGTTTGCATTGCAGATGTGCAAGACAATCTTGGTCA
GCAGGTCTGTCAATCCCTTGGTGGTGAGCCAGACACTTTTTTTTGCCATT
GTGATGTCACAAAGGAGGAAGATGTTTGCTCTGCTGTTGACCTCACAGTC
GAAAAATTTGGCACACTTGATATCATGGTCAATAATGCTGGCATTTCAGG
GGCTCCTTGTCCTGACATCCGTGAGGCGGACTTATCAGAGTTTGAGAAGG
TATTTGACATAAATGTGAAGGGAGTTTTCCATGGAATGAAGCATGCAGCT
CGGATCATGATCCCACAAACTAAGGGCACTATCATATCAATCTGCAGTGT
TGCAGGTGCCATTGGTGGTCTTGGCCCACATGCCTATACGGGGTCCAAGC
ATGCCGTTTTGGGACTCAACAAGAATGTTGCCGCTGAGCTTGGAAAATAT
GGCATCCGCGTGAACTGTGTTTCTCCTTATGCTGTTGCAACAGGCTTGGC
TTTGGCTCACTTGCCTGAAGAGGAGAGGACAGAGGATGCCATGGTAGGTT
TCCGTAATTTTGTTGCAAGAAATGCTAACATGCAGGGCACGGAGTTGACA
GCTAATGATGTGGCTAACGCTGTTCTCTTCCTAGCAAGTGATGAAGCTAG
GTACATAAGTGGAACGAATC
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