CX674980

Overview
NameCX674980
Unique NameCX674980
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: Y4MP_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4mP OS=Rhizobium sp. (strain NGR234) GN=NGR_a02430 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.895e-19
Identity = 81/240 (33.75%), Postives = 119/240 (49.58%), Query Frame = 1
Query:  130 STVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH----CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK----GTIISICSVAGAIGGL---GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            +T  LF  HGA+V I D+  +  +     L   P     H    CDV       SA D  +  FG  +I++NNAGI+      DI +AD   ++++  +N+ GV +     +++ IP  +    G+I  + SV+   GG    GPH Y+ +K  VLGL K +A E G   IRVNCV+P  + T +    L  E R  D + G    ++R  +       A DVAN  LFLASD + Y++G
Sbjct:   22 ATAELFASHGARVAILDINADEAKAAAGDL--PPVEHGAHIGLRCDVADRASCTSASDEVLSAFGVANILINNAGITQPVKTLDISDAD---WQRIVAVNMTGVLN----LSQVFIPNMRQNGGGSIACMSSVSAQRGGGIFGGPH-YSAAKAGVLGLAKAMAREFGPDSIRVNCVTPGLIQTDITGDKLSAEMRA-DIVKGIP--LSRLGD-------ARDVANIYLFLASDLSAYVTG 241          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 2.895e-19
Identity = 66/189 (34.92%), Postives = 100/189 (52.91%), Query Frame = 1
Query:  253 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            DV+  EDV + +  T+  F T+DI+VNNAGI+      I      E++ V +IN+KGVF+  K   R M+ Q  G II++ S+ G  G  G   Y  +K  V+GL K+ A EL    I VN ++P  ++T +   LA   ++E  +         +AR           +DV++ V FLAS+ ARY++G
Sbjct:   62 DVSNPEDVQNMIKETLSVFSTIDILVNNAGITRDNL--IMRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTDKLAKDVQDEMLKQIP------LARFGE-------PSDVSSVVTFLASEGARYMTG 235          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_CHLTR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia trachomatis GN=fabG PE=1 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 3.781e-19
Identity = 68/234 (29.06%), Postives = 109/234 (46.58%), Query Frame = 1
Query:  130 STVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP--DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLFLASDEARYISG 813
            S  +LF + GA V I  +    GQ   Q+L  +      F   DV+K + V + V   + ++ T+D++VNNAGI+      +      E+  V + N+  +++      R MI    G II+I S+ G  G  G   Y  +K  ++G +K ++ E+G   IRVNC++P  + T                M    N   +N  ++G  L       ++A A LFLASD + YI+G
Sbjct:   22 SIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSFALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDAL--LMRMSEEEWSSVINTNLGSIYNVCSAVIRPMIKARSGAIINISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTD---------------MTKSLNDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITG 238          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG2_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplastic OS=Brassica napus GN=bkr2 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.781e-19
Identity = 78/227 (34.36%), Postives = 118/227 (51.98%), Query Frame = 1
Query:  151 KHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA-SDEARYISG 813
            K G KV +     A   + + +Q+ ++ GG+  TF    DV+KE DV + +   V+ +GT+D++VNNAGI+      +     S++++V D+N+ GVF   + A +IM+ + KG II+I SV G IG +G   Y  +K  V+G +K  A E     I VN V P  +A+ +  A L E+   E  ++G            G      DVA  V FLA S  A YI+G
Sbjct:  107 KAGCKVLVNYARSAKEAEQVSKQI-EAYGGQAITF--GGDVSKEADVDAMMKTAVDAWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT-AKLGED--MEKKILG--------TIPLGRYGQPEDVAGLVEFLALSPAASYITG 317          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: BUTA_STAES (Acetoin(diacetyl) reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=butA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.781e-19
Identity = 69/190 (36.32%), Postives = 103/190 (54.21%), Query Frame = 1
Query:  253 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ-GTELTANDVANAVLFLASDEARYISG 813
            DV+K+++    V   V +FG LD+MVNNAG+    P  +I E +LS   K+F+INV G   G++ AA   I Q +KG II+ CS+AG         Y+ +KH+V    +  A EL   GI VN   P    T +      E  + +D++     F A ++ ++ G     +DVAN V FLAS+++ YI+G
Sbjct:   59 DVSKKKEQEELVQFAVTEFGQLDVMVNNAGVDAVTPILEIGEEELS---KLFNINVFGTLFGIQAAANQFIKQKSKGKIINACSIAGHESYEVLGTYSATKHSVRSFTQTAAKELADKGITVNAYCPGVAKTEMWDRIDEEMVKLDDSLEIGDAFEAFSSEIKLGRYQEPSDVANLVSFLASNDSDYITG 245          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: BUTA_STAEQ (Acetoin(diacetyl) reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=butA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.781e-19
Identity = 69/190 (36.32%), Postives = 103/190 (54.21%), Query Frame = 1
Query:  253 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ-GTELTANDVANAVLFLASDEARYISG 813
            DV+K+++    V   V +FG LD+MVNNAG+    P  +I E +LS   K+F+INV G   G++ AA   I Q +KG II+ CS+AG         Y+ +KH+V    +  A EL   GI VN   P    T +      E  + +D++     F A ++ ++ G     +DVAN V FLAS+++ YI+G
Sbjct:   59 DVSKKKEQEELVQFAVTEFGQLDVMVNNAGVDAVTPILEIGEEELS---KLFNINVFGTLFGIQAAANQFIKQKSKGKIINACSIAGHESYEVLGTYSATKHSVRSFTQTAAKELADKGITVNAYCPGVAKTEMWDRIDEEMVKLDDSLEIGDAFEAFSSEIKLGRYQEPSDVANLVSFLASNDSDYITG 245          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: BAIA1_EUBSP (Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (strain VPI 12708) GN=baiA1 PE=1 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 3.781e-19
Identity = 78/233 (33.48%), Postives = 115/233 (49.36%), Query Frame = 1
Query:  130 STVRLFHKHGAKVCI-ADVQDNLGQQVCQ--SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 816
            +  +LF ++GAKV I  + Q+ +   + Q   L  E +      D+T  + V +AV    +K+G LD+M+NNAGI+  +    + E D   F+ + DINV GVF+G   A + M    +G II+  SV G  G L    Y  SK  V+GL   +  E+ +  IRV  V+P  V T +     P  E  ED +        +   M+   L   ++AN  LFLASD A  I+ T
Sbjct:   21 AAAKLFIENGAKVSIFGETQEEVDTALAQLKELYPEEEVLGFAPDLTSRDAVMAAVGTVAQKYGRLDVMINNAGITMNSVFSRVSEED---FKNIMDINVNGVFNGAWSAYQCMKDAKQGVIINTASVTGIYGSLSGIGYPTSKAGVIGLTHGLGREIIRKNIRVVGVAPGVVDTDMTKGLPP--EILEDYL--------KTLPMK-RMLKPEEIANVYLFLASDLASGITAT 239          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: UCPA_ECOLI (Oxidoreductase ucpA OS=Escherichia coli (strain K12) GN=ucpA PE=1 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 6.450e-19
Identity = 72/231 (31.17%), Postives = 109/231 (47.19%), Query Frame = 1
Query:  139 RLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVF--DINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 816
            R F +HGA + + D+   + +   +  G          DV     V +A+    EK G +DI+VNNAG+    C      D+S+ ++ F  DIN+KGV++  K     MI +  G I+ + SV G  +   G  AY  +K A++GL K++A E  + GIRVN + P  V T +A  +A     E  E  +      +         E     V     FLASDE+ Y++GT
Sbjct:   24 RTFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGV----CRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLE-----VGELAAFLASDESSYLTGT 245          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: HCD2_DROME (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophila melanogaster GN=scu PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.450e-19
Identity = 66/194 (34.02%), Postives = 103/194 (53.09%), Query Frame = 1
Query:  130 STVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD----LSEFEKVFDINVKGVFHGMKHAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERT 681
            +T     K GA V +AD+  + G +V + LG +    F   DVT E+DV +A+    +KFG LD+ VN AG + A        +    L +F++V +IN  G F+ ++ +A +M          +G I++  SVA   G +G  AY+ SK AV+G+   +A +L   GIR+  ++P    T + LA LPE+ RT
Sbjct:   19 ATAERLAKQGASVILADLPSSKGNEVAKELGDK--VVFVPVDVTSEKDVSAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLSAGLMGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDLSTQGIRICTIAPGLFNTPM-LAALPEKVRT 209          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG3_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplastic OS=Brassica napus GN=bkr3 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.450e-19
Identity = 77/227 (33.92%), Postives = 118/227 (51.98%), Query Frame = 1
Query:  151 KHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA-SDEARYISG 813
            K G KV +     A   + + +Q+ ++ GG+  TF    DV+KE DV + +   ++ +GT+D++VNNAGI+      +     S++++V D+N+ GVF   + A +IM+ + KG II+I SV G IG +G   Y  +K  V+G +K  A E     I VN V P  +A+ +  A L E+   E  ++G            G      DVA  V FLA S  A YI+G
Sbjct:   94 KAGCKVLVNYARSAKEAEEVSKQI-EAYGGQAITF--GGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT-AKLGED--MEKKILG--------TIPLGRYGQPEDVAGLVEFLALSPAASYITG 304          
The following BLAST results are available for this feature:
BLAST of CX674980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
Y4MP_RHISN2.895e-1933.75Uncharacterized short-chain type dehydrogenase/red... [more]
FABG_BACSU2.895e-1934.923-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]
FABG_CHLTR3.781e-1929.063-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
FABG2_BRANA3.781e-1934.363-oxoacyl-[acyl-carrier-protein] reductase 2, chlo... [more]
BUTA_STAES3.781e-1936.32Acetoin(diacetyl) reductase OS=Staphylococcus epid... [more]
BUTA_STAEQ3.781e-1936.32Acetoin(diacetyl) reductase OS=Staphylococcus epid... [more]
BAIA1_EUBSP3.781e-1933.48Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (... [more]
UCPA_ECOLI6.450e-1931.17Oxidoreductase ucpA OS=Escherichia coli (strain K1... [more]
HCD2_DROME6.450e-1934.023-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophi... [more]
FABG3_BRANA6.450e-1933.923-oxoacyl-[acyl-carrier-protein] reductase 3, chlo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_9H02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9H02-O3-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674980 ID=CX674980; Name=CX674980; organism=Citrus sinensis; type=EST; length=820bp
GGCAATAGTTTTATTGTGTGAAATGTTCTACGTCTTCCTAAATGGCCTTA
GACGTGTTTTCTTTTCCTAACATTTTGTTGGTATAATTATTTTGTTTTAC
TTATTGTTTTAATAATTTAGATGGTTATGAGCACTGTACGCCTATTCCAC
AAGCATGGTGCAAAAGTTTGCATTGCAGATGTGCAAGACAATCTTGGTCA
GCAGGTCTGTCAATCCCTTGGTGGTGAGCCAGACACTTTTTTTTGCCATT
GTGATGTCACAAAGGAGGAAGATGTTTGCTCTGCTGTTGACCTCACAGTC
GAAAAATTTGGCACACTTGATATCATGGTCAATAATGCTGGCATTTCAGG
GGCTCCTTGTCCTGACATCCGTGAGGCGGACTTATCAGAGTTTGAGAAGG
TATTTGACATAAATGTGAAGGGAGTTTTCCATGGAATGAAGCATGCAGCT
CGGATCATGATCCCACAAACTAAGGGCACTATCATATCAATCTGCAGTGT
TGCAGGTGCCATTGGTGGTCTTGGCCCACATGCCTATACGGGGTCCAAGC
ATGCCGTTTTGGGACTCAACAAGAATGTTGCCGCTGAGCTTGGAAAATAT
GGCATCCGCGTGAACTGTGTTTCTCCTTATGCTGTTGCAACAGGCTTGGC
TTTGGCTCACTTGCCTGAAGAGGAGAGGACAGAGGATGCCATGGTAGGTT
TCCGTAATTTTGTTGCAAGAAATGCTAACATGCAGGGCACGGAGTTGACA
GCTAATGATGTGGCTAACGCTGTTCTCTTCCTAGCAAGTGATGAAGCTAG
GTACATAAGTGGAACGAATC
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