CX674980

Overview
NameCX674980
Unique NameCX674980
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5463 contig Csv1_Contig5463:1..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_RICFE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia felis GN=fabG PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.216e-17
Identity = 79/227 (34.80%), Postives = 118/227 (51.98%), Query Frame = 1
Query:  139 RLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCH-CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            RL HK G+ V I+       ++  +SLG    D +    C++  +E+ CS +   + K   LDI+V NAGI+      IR  D  +F+KV DIN+K  F   + A + M+    G II+I S+ G  G  G   Y  SK  ++G+ K+++ E+   GI VN V+P  + + +    L E++R  +A+V             GT     DVANAV FLASD+A YI+G
Sbjct:   24 RLLHKLGSHVIIS----GSNEEKLKSLGNVLKDNYTIEICNLANKEE-CSNL---ISKAPKLDILVCNAGITSDTLA-IRMKD-EDFDKVIDINLKANFILNREAIKKMMQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMT-DKLNEKQR--EAIV--------QKIPLGTYGMPEDVANAVAFLASDQASYITG 229          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: Y4VI_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4vI OS=Rhizobium sp. (strain NGR234) GN=NGR_a01150 PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.539e-17
Identity = 68/227 (29.96%), Postives = 117/227 (51.54%), Query Frame = 1
Query:  136 VRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 816
            V +F  +G  V   D+ D+   ++ Q+LG EP       DV++E+DV +   L  ++F  ++++VNNAGI G       +  L +F++   IN+ G +      A++M P     I+++ S+AG +G     AY  SK  ++ + K++A      GIRV  V+P  V T + +A L    + + + +  R  + R A         +++A AV FLAS +A YI+G+
Sbjct:   26 VDIFAANGDVVVAVDLPDSGVIELGQNLG-EPHLGL-EVDVSREDDVVALRALLEKRFSRIEVLVNNAGI-GPTMAATADTALEDFQRALAINLVGAYSVACETAKLMKPGA--AIVNVASLAGLLGNPKRSAYAASKAGLISITKSLACRWASRGIRVTAVAPGHVRTPM-VAELERAGKLDVSAIRRRVPLGRIAR-------PDEIARAVRFLASAQASYITGS 239          

HSP 2 Score: 68.9366 bits (167), Expect = 3.790e-11
Identity = 67/227 (29.52%), Postives = 102/227 (44.93%), Query Frame = 1
Query:  139 RLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP-HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 816
            R F ++G  V IAD       ++   LG +        D T E +V S  +   E+FG LD+ VN  G++    P+  E+     +++ D+N+ G F  ++ AA   I    G++I     + ++  L P HAY      +  L +  AAELG  GIR   V+P  + T  A            A+ G  +   R     G    A +VA A  FLAS +A YI+G+
Sbjct:  295 RRFAENGDTVVIADGDGEEAVKLAGLLGDKH--LSRRVDRTVETEVVSLFEELRERFGHLDVFVN--GMNEILVPNTEESP-EVLKRILDVNLTGAFTCVREAA---ISMRSGSVILNLGASLSLSPLAPSHAYGAYNAGIDMLTRCTAAELGPLGIRTATVAPGYIRTCAA--------NRLAAVAGMDSASLRQRIPLGRVGDAEEVAEAAYFLASFDASYINGS 505          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: HCD2_RAT (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus GN=Hsd17b10 PE=1 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 3.539e-17
Identity = 63/193 (32.64%), Postives = 103/193 (53.37%), Query Frame = 1
Query:  130 STVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD----LSEFEKVFDINVKGVFHGMKHAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER 678
            ST +     GA   + DV ++ G+   + LGG  +  F   +VT E++V +A+ L  EKFG +D+ VN AGI+ A      + +    L +F++V ++N+ G F+ ++  A +M          +G II+  SVA   G +G  AY+ SK  ++G+   +A +L   GIRV  ++P   AT L L  LP++ R
Sbjct:   25 STAKRLVGQGATAVLLDVPNSEGETEAKKLGG--NCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPL-LTTLPDKVR 214          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_SALTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhimurium GN=fabG PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.539e-17
Identity = 69/219 (31.51%), Postives = 105/219 (47.95%), Query Frame = 1
Query:  157 GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            GAKV      +N  + +   LG        +  VT    + S ++    +FG +DI+VNNAGI+        + D  E+  + + N+  VF   K   R M+ +  G II+I SV G +G  G   Y  +K  ++G +K++A E+   GI VN V+P  + T +  A       ++D   G    V       G    A ++A+AV FLASDEA YI+G
Sbjct:   29 GAKVIGTATSENGAKNISDYLGANGKGLMLN--VTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDD--EWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA------LSDDQRAGILAQVPA-----GRLGGAQEIASAVAFLASDEASYITG 232          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_SALTI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.539e-17
Identity = 69/219 (31.51%), Postives = 105/219 (47.95%), Query Frame = 1
Query:  157 GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            GAKV      +N  + +   LG        +  VT    + S ++    +FG +DI+VNNAGI+        + D  E+  + + N+  VF   K   R M+ +  G II+I SV G +G  G   Y  +K  ++G +K++A E+   GI VN V+P  + T +  A       ++D   G    V       G    A ++A+AV FLASDEA YI+G
Sbjct:   29 GAKVIGTATSENGAKNISDYLGANGKGLMLN--VTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDD--EWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA------LSDDQRAGILAQVPA-----GRLGGAQEIASAVAFLASDEASYITG 232          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_RICTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.539e-17
Identity = 76/226 (33.63%), Postives = 117/226 (51.77%), Query Frame = 1
Query:  139 RLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH-CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            RL HK G+KV I+   +   + +  +L    D +    C++  +E+ C+ +   + K   LDI+V NAGI+      IR  D  +F+KV DIN+K  F   + A + MI +  G II+I S+ G  G  G   Y  SK  ++G+ K+++ E+   GI VN V+P  + + +    L E++R  +A+V             GT     DVA AV FLAS+ A YI+G
Sbjct:   24 RLLHKLGSKVIISGSNEKKLKLLGNTL---KDNYIIEVCNLANKEE-CNNL---ISKISNLDILVCNAGITSDTLA-IRMKD-QDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMT-DKLNEKQR--EAIV--------QKIPLGTYGIPEDVAYAVAFLASNHASYITG 229          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_RICCN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia conorii GN=fabG PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.539e-17
Identity = 80/233 (34.33%), Postives = 115/233 (49.36%), Query Frame = 1
Query:  139 RLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE---DVCSAVDLT-----VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            RL HK G+ V I+       ++  QSLG           V K+    +VC+  D       + K   LDI+V NAGI+      IR  D  +F+KV DIN+K  F   + A + MI    G II+I S+ G  G  G   Y  SK  ++G+ K+++ E+   GI VN V+P  + + +    L E++R  +A+V             GT     DVA+AV FLASD+A YI+G
Sbjct:   24 RLLHKLGSHVIIS----GSNEEKLQSLG----------KVVKDNYTIEVCNLADKEECRNLISKASKLDILVCNAGITSDTLA-IRMKD-EDFDKVIDINLKANFILNREAIKKMIQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNTVAPGFIKSDMT-DKLNEKQR--EAIV--------QKIPLGTYGMPEDVAHAVAFLASDQASYITG 229          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: DHGA_BACME (Glucose 1-dehydrogenase A OS=Bacillus megaterium GN=gdhA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.539e-17
Identity = 62/188 (32.98%), Postives = 91/188 (48.40%), Query Frame = 1
Query:  253 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            DVTKEEDV + V   +++FGTLD+M+NNAG+   P P   E  L  + KV D N+ G F G + A +  +    KG +I++ SV   I       Y  SK  +  + + +A E    GIRVN + P A+ T +      + E+  D           +    G      +VA    FLAS +A Y++G
Sbjct:   65 DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVEN-PVPS-HELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPEQRAD---------VESMIPMGYIGKPEEVAAVAAFLASSQASYVTG 241          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: DHG2_BACSU (Glucose 1-dehydrogenase 2 OS=Bacillus subtilis GN=ycdF PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.623e-17
Identity = 61/189 (32.28%), Postives = 95/189 (50.26%), Query Frame = 1
Query:  253 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            DV+KEE + + +D  +E FGTLD+MVNN+G +G       E  L ++++V D+NV G F G K A   M+    KG +++I SV   I       Y+ SK  +  + + +A      GIRVN ++P  +AT   +    EE R +    +  + F               +VA A  +L S+EA Y++G
Sbjct:   65 DVSKEEGIQALLDTALEHFGTLDVMVNNSGFNGVEAMP-HEMSLEDWQRVIDVNVTGTFLGAKAALNHMMKNNIKGNVLNISSVHQQIPRPVNVQYSTSKGGIKMMTETLALNYADKGIRVNAIAPGTIATESNVDTKKEESRQKQLKKIPMKAFG-----------KPEEVAAAAAWLVSEEASYVTG 241          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: DHG2_BACME (Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.623e-17
Identity = 60/188 (31.91%), Postives = 93/188 (49.47%), Query Frame = 1
Query:  253 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            DVTKEEDV + V+  V++FG+LD+M+NNAG+   P P   E  L  + +V D N+ G F G + A +  +    KG +I++ SV   I       Y  SK  +  + + +A E    GIRVN + P A+ T +      + E+  D           +    G      ++A+   FLAS +A Y++G
Sbjct:   65 DVTKEEDVVNLVETAVKEFGSLDVMINNAGVEN-PVPS-HELSLENWNQVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAIDTPINAEKFADPEQRAD---------VESMIPMGYIGKPEEIASVAAFLASSQASYVTG 241          
The following BLAST results are available for this feature:
BLAST of CX674980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
FABG_RICFE1.216e-1734.803-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
Y4VI_RHISN3.539e-1729.96Uncharacterized short-chain type dehydrogenase/red... [more]
HCD2_RAT3.539e-1732.643-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus n... [more]
FABG_SALTY3.539e-1731.513-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
FABG_SALTI3.539e-1731.513-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
FABG_RICTY3.539e-1733.633-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_RICCN3.539e-1734.333-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
DHGA_BACME3.539e-1732.98Glucose 1-dehydrogenase A OS=Bacillus megaterium G... [more]
DHG2_BACSU4.623e-1732.28Glucose 1-dehydrogenase 2 OS=Bacillus subtilis GN=... [more]
DHG2_BACME4.623e-1731.91Glucose 1-dehydrogenase 2 OS=Bacillus megaterium G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_9H02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9H02-O3-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674980 ID=CX674980; Name=CX674980; organism=Citrus sinensis; type=EST; length=820bp
GGCAATAGTTTTATTGTGTGAAATGTTCTACGTCTTCCTAAATGGCCTTA
GACGTGTTTTCTTTTCCTAACATTTTGTTGGTATAATTATTTTGTTTTAC
TTATTGTTTTAATAATTTAGATGGTTATGAGCACTGTACGCCTATTCCAC
AAGCATGGTGCAAAAGTTTGCATTGCAGATGTGCAAGACAATCTTGGTCA
GCAGGTCTGTCAATCCCTTGGTGGTGAGCCAGACACTTTTTTTTGCCATT
GTGATGTCACAAAGGAGGAAGATGTTTGCTCTGCTGTTGACCTCACAGTC
GAAAAATTTGGCACACTTGATATCATGGTCAATAATGCTGGCATTTCAGG
GGCTCCTTGTCCTGACATCCGTGAGGCGGACTTATCAGAGTTTGAGAAGG
TATTTGACATAAATGTGAAGGGAGTTTTCCATGGAATGAAGCATGCAGCT
CGGATCATGATCCCACAAACTAAGGGCACTATCATATCAATCTGCAGTGT
TGCAGGTGCCATTGGTGGTCTTGGCCCACATGCCTATACGGGGTCCAAGC
ATGCCGTTTTGGGACTCAACAAGAATGTTGCCGCTGAGCTTGGAAAATAT
GGCATCCGCGTGAACTGTGTTTCTCCTTATGCTGTTGCAACAGGCTTGGC
TTTGGCTCACTTGCCTGAAGAGGAGAGGACAGAGGATGCCATGGTAGGTT
TCCGTAATTTTGTTGCAAGAAATGCTAACATGCAGGGCACGGAGTTGACA
GCTAATGATGTGGCTAACGCTGTTCTCTTCCTAGCAAGTGATGAAGCTAG
GTACATAAGTGGAACGAATC
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