CX674980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_RICFE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia felis GN=fabG PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.216e-17 Identity = 79/227 (34.80%), Postives = 118/227 (51.98%), Query Frame = 1 Query: 139 RLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCH-CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813 RL HK G+ V I+ ++ +SLG D + C++ +E+ CS + + K LDI+V NAGI+ IR D +F+KV DIN+K F + A + M+ G II+I S+ G G G Y SK ++G+ K+++ E+ GI VN V+P + + + L E++R +A+V GT DVANAV FLASD+A YI+G Sbjct: 24 RLLHKLGSHVIIS----GSNEEKLKSLGNVLKDNYTIEICNLANKEE-CSNL---ISKAPKLDILVCNAGITSDTLA-IRMKD-EDFDKVIDINLKANFILNREAIKKMMQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMT-DKLNEKQR--EAIV--------QKIPLGTYGMPEDVANAVAFLASDQASYITG 229
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: Y4VI_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4vI OS=Rhizobium sp. (strain NGR234) GN=NGR_a01150 PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.539e-17 Identity = 68/227 (29.96%), Postives = 117/227 (51.54%), Query Frame = 1 Query: 136 VRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 816 V +F +G V D+ D+ ++ Q+LG EP DV++E+DV + L ++F ++++VNNAGI G + L +F++ IN+ G + A++M P I+++ S+AG +G AY SK ++ + K++A GIRV V+P V T + +A L + + + + R + R A +++A AV FLAS +A YI+G+ Sbjct: 26 VDIFAANGDVVVAVDLPDSGVIELGQNLG-EPHLGL-EVDVSREDDVVALRALLEKRFSRIEVLVNNAGI-GPTMAATADTALEDFQRALAINLVGAYSVACETAKLMKPGA--AIVNVASLAGLLGNPKRSAYAASKAGLISITKSLACRWASRGIRVTAVAPGHVRTPM-VAELERAGKLDVSAIRRRVPLGRIAR-------PDEIARAVRFLASAQASYITGS 239 HSP 2 Score: 68.9366 bits (167), Expect = 3.790e-11 Identity = 67/227 (29.52%), Postives = 102/227 (44.93%), Query Frame = 1 Query: 139 RLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP-HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 816 R F ++G V IAD ++ LG + D T E +V S + E+FG LD+ VN G++ P+ E+ +++ D+N+ G F ++ AA I G++I + ++ L P HAY + L + AAELG GIR V+P + T A A+ G + R G A +VA A FLAS +A YI+G+ Sbjct: 295 RRFAENGDTVVIADGDGEEAVKLAGLLGDKH--LSRRVDRTVETEVVSLFEELRERFGHLDVFVN--GMNEILVPNTEESP-EVLKRILDVNLTGAFTCVREAA---ISMRSGSVILNLGASLSLSPLAPSHAYGAYNAGIDMLTRCTAAELGPLGIRTATVAPGYIRTCAA--------NRLAAVAGMDSASLRQRIPLGRVGDAEEVAEAAYFLASFDASYINGS 505
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: HCD2_RAT (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus GN=Hsd17b10 PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 3.539e-17 Identity = 63/193 (32.64%), Postives = 103/193 (53.37%), Query Frame = 1 Query: 130 STVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD----LSEFEKVFDINVKGVFHGMKHAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER 678 ST + GA + DV ++ G+ + LGG + F +VT E++V +A+ L EKFG +D+ VN AGI+ A + + L +F++V ++N+ G F+ ++ A +M +G II+ SVA G +G AY+ SK ++G+ +A +L GIRV ++P AT L L LP++ R Sbjct: 25 STAKRLVGQGATAVLLDVPNSEGETEAKKLGG--NCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPL-LTTLPDKVR 214
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_SALTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhimurium GN=fabG PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.539e-17 Identity = 69/219 (31.51%), Postives = 105/219 (47.95%), Query Frame = 1 Query: 157 GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813 GAKV +N + + LG + VT + S ++ +FG +DI+VNNAGI+ + D E+ + + N+ VF K R M+ + G II+I SV G +G G Y +K ++G +K++A E+ GI VN V+P + T + A ++D G V G A ++A+AV FLASDEA YI+G Sbjct: 29 GAKVIGTATSENGAKNISDYLGANGKGLMLN--VTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDD--EWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA------LSDDQRAGILAQVPA-----GRLGGAQEIASAVAFLASDEASYITG 232
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_SALTI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhi GN=fabG PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.539e-17 Identity = 69/219 (31.51%), Postives = 105/219 (47.95%), Query Frame = 1 Query: 157 GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813 GAKV +N + + LG + VT + S ++ +FG +DI+VNNAGI+ + D E+ + + N+ VF K R M+ + G II+I SV G +G G Y +K ++G +K++A E+ GI VN V+P + T + A ++D G V G A ++A+AV FLASDEA YI+G Sbjct: 29 GAKVIGTATSENGAKNISDYLGANGKGLMLN--VTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDD--EWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA------LSDDQRAGILAQVPA-----GRLGGAQEIASAVAFLASDEASYITG 232
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_RICTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia typhi GN=fabG PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.539e-17 Identity = 76/226 (33.63%), Postives = 117/226 (51.77%), Query Frame = 1 Query: 139 RLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH-CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813 RL HK G+KV I+ + + + +L D + C++ +E+ C+ + + K LDI+V NAGI+ IR D +F+KV DIN+K F + A + MI + G II+I S+ G G G Y SK ++G+ K+++ E+ GI VN V+P + + + L E++R +A+V GT DVA AV FLAS+ A YI+G Sbjct: 24 RLLHKLGSKVIISGSNEKKLKLLGNTL---KDNYIIEVCNLANKEE-CNNL---ISKISNLDILVCNAGITSDTLA-IRMKD-QDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMT-DKLNEKQR--EAIV--------QKIPLGTYGIPEDVAYAVAFLASNHASYITG 229
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_RICCN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia conorii GN=fabG PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.539e-17 Identity = 80/233 (34.33%), Postives = 115/233 (49.36%), Query Frame = 1 Query: 139 RLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE---DVCSAVDLT-----VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813 RL HK G+ V I+ ++ QSLG V K+ +VC+ D + K LDI+V NAGI+ IR D +F+KV DIN+K F + A + MI G II+I S+ G G G Y SK ++G+ K+++ E+ GI VN V+P + + + L E++R +A+V GT DVA+AV FLASD+A YI+G Sbjct: 24 RLLHKLGSHVIIS----GSNEEKLQSLG----------KVVKDNYTIEVCNLADKEECRNLISKASKLDILVCNAGITSDTLA-IRMKD-EDFDKVIDINLKANFILNREAIKKMIQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNTVAPGFIKSDMT-DKLNEKQR--EAIV--------QKIPLGTYGMPEDVAHAVAFLASDQASYITG 229
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: DHGA_BACME (Glucose 1-dehydrogenase A OS=Bacillus megaterium GN=gdhA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.539e-17 Identity = 62/188 (32.98%), Postives = 91/188 (48.40%), Query Frame = 1 Query: 253 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813 DVTKEEDV + V +++FGTLD+M+NNAG+ P P E L + KV D N+ G F G + A + + KG +I++ SV I Y SK + + + +A E GIRVN + P A+ T + + E+ D + G +VA FLAS +A Y++G Sbjct: 65 DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVEN-PVPS-HELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPEQRAD---------VESMIPMGYIGKPEEVAAVAAFLASSQASYVTG 241
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: DHG2_BACSU (Glucose 1-dehydrogenase 2 OS=Bacillus subtilis GN=ycdF PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 4.623e-17 Identity = 61/189 (32.28%), Postives = 95/189 (50.26%), Query Frame = 1 Query: 253 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813 DV+KEE + + +D +E FGTLD+MVNN+G +G E L ++++V D+NV G F G K A M+ KG +++I SV I Y+ SK + + + +A GIRVN ++P +AT + EE R + + + F +VA A +L S+EA Y++G Sbjct: 65 DVSKEEGIQALLDTALEHFGTLDVMVNNSGFNGVEAMP-HEMSLEDWQRVIDVNVTGTFLGAKAALNHMMKNNIKGNVLNISSVHQQIPRPVNVQYSTSKGGIKMMTETLALNYADKGIRVNAIAPGTIATESNVDTKKEESRQKQLKKIPMKAFG-----------KPEEVAAAAAWLVSEEASYVTG 241
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: DHG2_BACME (Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.623e-17 Identity = 60/188 (31.91%), Postives = 93/188 (49.47%), Query Frame = 1 Query: 253 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813 DVTKEEDV + V+ V++FG+LD+M+NNAG+ P P E L + +V D N+ G F G + A + + KG +I++ SV I Y SK + + + +A E GIRVN + P A+ T + + E+ D + G ++A+ FLAS +A Y++G Sbjct: 65 DVTKEEDVVNLVETAVKEFGSLDVMINNAGVEN-PVPS-HELSLENWNQVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAIDTPINAEKFADPEQRAD---------VESMIPMGYIGKPEEIASVAAFLASSQASYVTG 241 The following BLAST results are available for this feature:
BLAST of CX674980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674980 ID=CX674980; Name=CX674980; organism=Citrus sinensis; type=EST; length=820bpback to top |