CX674980

Overview
NameCX674980
Unique NameCX674980
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: LINX_PSEPA (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase OS=Pseudomonas paucimobilis GN=linX PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.037e-17
Identity = 67/228 (29.39%), Postives = 106/228 (46.49%), Query Frame = 1
Query:  145 FHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTN 819
            F + GAKV I D+ + + + V   +   GG  D  F   DVT      +A+   V+ FG L  + N AGI         E  +  + K+  +N   +F G+K A   ++    G+II+I S+ G     G  +Y  +K AV  ++K  A E    G+RVN + P  + T +     P+  + + + +             G  +   D+AN  LFLASDEA+YI+G +
Sbjct:   27 FAEEGAKVVIGDLNEEMAKGVVAEIRAAGG--DALFIRLDVTDAASWNNAIAAAVDGFGGLTTLSNTAGIIHPG--GFEEESIEGWNKMVAVNQTAIFLGIKAAIPELVKSGNGSIINISSLIGMFPTAGNASYCATKAAVRIMSKAAALEFVDRGVRVNTIVPGGMNTPITANVPPDVLKQQTSQIPMGKL--------GDPI---DIANGALFLASDEAKYITGVD 239          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: BUTA_STAAW (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain MW2) GN=butA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.037e-17
Identity = 70/223 (31.39%), Postives = 103/223 (46.19%), Query Frame = 1
Query:  157 GAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA-ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            G KV + D  +   +     L  +         DV+  +DV +AV  T  +FG   +MVNNAG+   P   I      +F+ V+ +NV GV  G++ A  +       G II+  S AG  G  G   Y  +K AV GL +  A +L   GI VN  +P  V T +  ++A    EE  +    G+  F ++ A   G      DV+N V FLA  ++ YI+G
Sbjct:   28 GFKVAVVDFNEEGAKAAALKLSSDGTKAIAIKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGL--GPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIA--LGRVSQPEDVSNVVSFLAGKDSDYITG 246          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: BUTA_STAAS (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain MSSA476) GN=butA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.037e-17
Identity = 70/223 (31.39%), Postives = 103/223 (46.19%), Query Frame = 1
Query:  157 GAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA-ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            G KV + D  +   +     L  +         DV+  +DV +AV  T  +FG   +MVNNAG+   P   I      +F+ V+ +NV GV  G++ A  +       G II+  S AG  G  G   Y  +K AV GL +  A +L   GI VN  +P  V T +  ++A    EE  +    G+  F ++ A   G      DV+N V FLA  ++ YI+G
Sbjct:   28 GFKVAVVDFNEEGAKAAALKLSSDGTKAIAIKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGL--GPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIA--LGRVSQPEDVSNVVSFLAGKDSDYITG 246          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: BUTA_STAAR (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain MRSA252) GN=butA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.037e-17
Identity = 70/223 (31.39%), Postives = 103/223 (46.19%), Query Frame = 1
Query:  157 GAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA-ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            G KV + D  +   +     L  +         DV+  +DV +AV  T  +FG   +MVNNAG+   P   I      +F+ V+ +NV GV  G++ A  +       G II+  S AG  G  G   Y  +K AV GL +  A +L   GI VN  +P  V T +  ++A    EE  +    G+  F ++ A   G      DV+N V FLA  ++ YI+G
Sbjct:   28 GFKVAVVDFNEEGAKAAALKLSSDGTKAIAIKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGL--GPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIA--LGRVSQPEDVSNVVSFLAGKDSDYITG 246          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: BUTA_STAAN (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain N315) GN=butA PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.037e-17
Identity = 70/223 (31.39%), Postives = 103/223 (46.19%), Query Frame = 1
Query:  157 GAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA-ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            G KV + D  +   +     L  +         DV+  +DV +AV  T  +FG   +MVNNAG+   P   I      +F+ V+ +NV GV  G++ A  +       G II+  S AG  G  G   Y  +K AV GL +  A +L   GI VN  +P  V T +  ++A    EE  +    G+  F ++ A   G      DV+N V FLA  ++ YI+G
Sbjct:   28 GFKVAVVDFNEEGAKAAALKLSSDGTKAIAIKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGL--GPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIA--LGRVSQPEDVSNVVSFLAGKDSDYITG 246          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: BUTA_STAAM (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=butA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.037e-17
Identity = 70/223 (31.39%), Postives = 103/223 (46.19%), Query Frame = 1
Query:  157 GAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA-ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            G KV + D  +   +     L  +         DV+  +DV +AV  T  +FG   +MVNNAG+   P   I      +F+ V+ +NV GV  G++ A  +       G II+  S AG  G  G   Y  +K AV GL +  A +L   GI VN  +P  V T +  ++A    EE  +    G+  F ++ A   G      DV+N V FLA  ++ YI+G
Sbjct:   28 GFKVAVVDFNEEGAKAAALKLSSDGTKAIAIKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGL--GPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIA--LGRVSQPEDVSNVVSFLAGKDSDYITG 246          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: BUTA_STAAC (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain COL) GN=butA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.037e-17
Identity = 70/223 (31.39%), Postives = 103/223 (46.19%), Query Frame = 1
Query:  157 GAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA-ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            G KV + D  +   +     L  +         DV+  +DV +AV  T  +FG   +MVNNAG+   P   I      +F+ V+ +NV GV  G++ A  +       G II+  S AG  G  G   Y  +K AV GL +  A +L   GI VN  +P  V T +  ++A    EE  +    G+  F ++ A   G      DV+N V FLA  ++ YI+G
Sbjct:   28 GFKVAVVDFNEEGAKAAALKLSSDGTKAIAIKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGL--GPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIA--LGRVSQPEDVSNVVSFLAGKDSDYITG 246          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_ARATH (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g24360 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 7.885e-17
Identity = 74/227 (32.60%), Postives = 116/227 (51.10%), Query Frame = 1
Query:  151 KHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA-SDEARYISG 813
            K G KV +     A   + + +Q+ +  GG+  TF    DV+K  DV + +   ++K+GT+D++VNNAGI+      +     S++++V  +N+ GVF   + A +IM+ + +G II+I SV G IG +G   Y  +K  V+  +K  A E     I VN V P  +A+ +  A L E+   E  ++G            G    A +VA  V FLA S  A YI+G
Sbjct:   98 KAGCKVLVNYARSAKEAEEVAKQI-EEYGGQAITF--GGDVSKATDVDAMMKTALDKWGTIDVVVNNAGITRDTL--LIRMKQSQWDEVIALNLTGVFLCTQAAVKIMMKKKRGRIINISSVVGLIGNIGQANYAAAKGGVISFSKTAAREGASRNINVNVVCPGFIASDMT-AELGED--MEKKILG--------TIPLGRYGKAEEVAGLVEFLALSPAASYITG 308          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: YKVO_BACSU (Uncharacterized oxidoreductase ykvO OS=Bacillus subtilis GN=ykvO PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.345e-16
Identity = 76/229 (33.19%), Postives = 109/229 (47.60%), Query Frame = 1
Query:  130 STVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            +T + F   GA V I   + N   +    +G   +      D++K ED+    D+  ++ G LDI+  NAGI    P  +I E    + ++ FDINVKG    ++ A  +  P   G+II   S AG+IG      Y  SK A+  L +N   +L    IRVN VSP  + T         +E   DA+       +RN    G   T  +VANAV FLASDE+ Y++G
Sbjct:   21 ATAQKFVNEGAYVYITGRRQNELDKAVNQIG--KNVTGVQGDISKLEDLDKLYDIIKQEKGKLDILFANAGIGNFLPLGEITE---EQVDRTFDINVKGTIFTVQKALSLF-PDKVGSIIVTGSTAGSIGNPAFSVYGASKAALRALVRNWILDLKGTEIRVNVVSPGGILTP------AYDELFGDALEEVLE-NSRNTVPAGKVGTPEEVANAVSFLASDESSYLTG 236          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: Y2567_STAAR (Uncharacterized oxidoreductase SAR2567 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2567 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.345e-16
Identity = 53/179 (29.61%), Postives = 92/179 (51.40%), Query Frame = 1
Query:  142 LFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER 678
            L H+ GAKV +A    +  Q V   L  +        DVTK+E+V   + +  + FG LDI++N+AG   +    I +  + E++ + D+N+KG  +  K A   M+ Q+ G +I+I S++G         Y+ +K AV  + + +  EL K G++V  +SP  V T +   + P + +
Sbjct:   25 LLHEEGAKVVLAGRNKDKLQNVANQLA-QDSVKVVPTDVTKKEEVDELIKMAQQTFGGLDIVINSAGQMLSS--KITDYQVDEWDSMIDVNIKGTLYTAKAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITATYNPTDRK 200          
The following BLAST results are available for this feature:
BLAST of CX674980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
LINX_PSEPA6.037e-1729.392,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
BUTA_STAAW6.037e-1731.39Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAS6.037e-1731.39Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAR6.037e-1731.39Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAN6.037e-1731.39Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAM6.037e-1731.39Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAC6.037e-1731.39Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
FABG_ARATH7.885e-1732.603-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
YKVO_BACSU1.345e-1633.19Uncharacterized oxidoreductase ykvO OS=Bacillus su... [more]
Y2567_STAAR1.345e-1629.61Uncharacterized oxidoreductase SAR2567 OS=Staphylo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_9H02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9H02-O3-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674980 ID=CX674980; Name=CX674980; organism=Citrus sinensis; type=EST; length=820bp
GGCAATAGTTTTATTGTGTGAAATGTTCTACGTCTTCCTAAATGGCCTTA
GACGTGTTTTCTTTTCCTAACATTTTGTTGGTATAATTATTTTGTTTTAC
TTATTGTTTTAATAATTTAGATGGTTATGAGCACTGTACGCCTATTCCAC
AAGCATGGTGCAAAAGTTTGCATTGCAGATGTGCAAGACAATCTTGGTCA
GCAGGTCTGTCAATCCCTTGGTGGTGAGCCAGACACTTTTTTTTGCCATT
GTGATGTCACAAAGGAGGAAGATGTTTGCTCTGCTGTTGACCTCACAGTC
GAAAAATTTGGCACACTTGATATCATGGTCAATAATGCTGGCATTTCAGG
GGCTCCTTGTCCTGACATCCGTGAGGCGGACTTATCAGAGTTTGAGAAGG
TATTTGACATAAATGTGAAGGGAGTTTTCCATGGAATGAAGCATGCAGCT
CGGATCATGATCCCACAAACTAAGGGCACTATCATATCAATCTGCAGTGT
TGCAGGTGCCATTGGTGGTCTTGGCCCACATGCCTATACGGGGTCCAAGC
ATGCCGTTTTGGGACTCAACAAGAATGTTGCCGCTGAGCTTGGAAAATAT
GGCATCCGCGTGAACTGTGTTTCTCCTTATGCTGTTGCAACAGGCTTGGC
TTTGGCTCACTTGCCTGAAGAGGAGAGGACAGAGGATGCCATGGTAGGTT
TCCGTAATTTTGTTGCAAGAAATGCTAACATGCAGGGCACGGAGTTGACA
GCTAATGATGTGGCTAACGCTGTTCTCTTCCTAGCAAGTGATGAAGCTAG
GTACATAAGTGGAACGAATC
back to top