CX674980

Overview
NameCX674980
Unique NameCX674980
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5463 contig Csv1_Contig5463:1..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: Y019_THEMA (Uncharacterized oxidoreductase TM_0019 OS=Thermotoga maritima GN=TM_0019 PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.996e-16
Identity = 71/233 (30.47%), Postives = 110/233 (47.21%), Query Frame = 1
Query:  139 RLFHKHGAKVCIADVQDNLGQQVCQSLGGEP-DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATG----LALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE-ARYISGTN 819
            +LF ++G KV IA++ +  G +  + L     D  F   DV  E  V + V  TVE +G +D++VNNA +       I E  L E+E+V  +N+ G +   ++ A  MI +  G II+I S            Y+ SK  ++ L  ++A  L +Y IRV  +SP  + T      +L   P+    +             A   G  L   D+A+  +FLA DE A +I+GTN
Sbjct:   22 QLFAENGMKVVIAEIDEEAGVEREEMLRERGLDVTFVKTDVADENSVKNMVRKTVEIYGGVDVLVNNAAVMSVK--SIFERPLEEWERVIRVNLTGPYICSRYCAEEMIKRGGGVIINIASTRAFQSEPDTEPYSASKGGLVALTHSLAVSLSRYHIRVVSISPGWIETSEWKKKSLRKKPDLRPIDHEQ--------HPAGRVGNPL---DIAHLCVFLADDEKAGFITGTN 241          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: SDR1_PICAB (Short-chain type dehydrogenase/reductase OS=Picea abies PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.996e-16
Identity = 62/189 (32.80%), Postives = 90/189 (47.62%), Query Frame = 1
Query:  244 CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYIS 810
            C  DV +   V    D     FG L I+VNNAG++ +  P + +    E++++F +N KG F   + AA+ ++    G II+I S   A+      AYT SK AV  + + +A EL    I  NCV+P  VAT +  A   + E   +A V    F               DVA  V FLASDE  +++
Sbjct:   82 CKADVAEPSQVAQLFDTAEHAFGPLHIVVNNAGVTDSKYPTLAQTSDEEWDRIFQVNCKGAFLCSREAAKRVVRGGGGRIINISSSLVAMPIPRYGAYTASKAAVEMMTRILAQELRGTQITANCVAPGPVATDMFFA--GKSEAAVEAGVKSNPFERLG--------KVEDVAPLVAFLASDEGEWVN 260          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_BUCAP (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=fabG PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.996e-16
Identity = 57/187 (30.48%), Postives = 96/187 (51.34%), Query Frame = 1
Query:  253 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            D+   + +   +    +K  ++DI++NNAGI+      +      E+E V  IN+  VF+  K   R MI +  G I++I SV G +G  G   Y+ SK  ++G +K++A E+ + GI VN VSP  + T L       + +   + +  +              TA ++ANAV+FL+S++A YI+G
Sbjct:   59 DLKDTDSILEKMKEICQKKYSIDILINNAGITSDNL--LVYMSNKEWENVIKINLTSVFYMSKSVIRSMIKKRYGRIVTIGSVIGYLGNRGQINYSASKSGLIGFHKSLALEVAQKGITVNIVSPGFIKTNLTKNLNVFQYKKHLSKIPMKRIG-----------TAEEIANAVIFLSSEKASYITG 232          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: Y2478_STAAM (Uncharacterized oxidoreductase SAV2478 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2478 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.913e-16
Identity = 53/182 (29.12%), Postives = 93/182 (51.10%), Query Frame = 1
Query:  142 LFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED 687
            L H+ GAKV +A    +  Q V   L  +        DVT +E+V   + +  + FG LDI++N+AG   +    I +  + E++ + D+N+KG  +  + A   M+ Q+ G +I+I S++G         Y+ +K AV  + + +  EL K G++V  +SP  V T +  A+ P + +  D
Sbjct:   25 LLHEEGAKVVLAGRNKDKLQNVANQLA-QDSVKVVPTDVTNKEEVDELMKIAQQTFGGLDIVINSAGQMLSS--KITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITAAYNPSDRKKLD 203          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: Y2266_STAAN (Uncharacterized oxidoreductase SA2266 OS=Staphylococcus aureus (strain N315) GN=SA2266 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.913e-16
Identity = 53/182 (29.12%), Postives = 93/182 (51.10%), Query Frame = 1
Query:  142 LFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED 687
            L H+ GAKV +A    +  Q V   L  +        DVT +E+V   + +  + FG LDI++N+AG   +    I +  + E++ + D+N+KG  +  + A   M+ Q+ G +I+I S++G         Y+ +K AV  + + +  EL K G++V  +SP  V T +  A+ P + +  D
Sbjct:   25 LLHEEGAKVVLAGRNKDKLQNVANQLA-QDSVKVVPTDVTNKEEVDELMKIAQQTFGGLDIVINSAGQMLSS--KITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITAAYNPSDRKKLD 203          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: LIMC_RHOER ((-)-trans-carveol dehydrogenase OS=Rhodococcus erythropolis GN=limC PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.913e-16
Identity = 70/222 (31.53%), Postives = 106/222 (47.75%), Query Frame = 1
Query:  175 ADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAA-RIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA--------NDVANAVLFLASDEARYISG 813
            AD  D   + V ++LG +      H DV   E + + VD  V   G LDI+  NAGI+  P       D + + ++ DIN+ GV+H  K A   I+  +  G+I+   S AG  G      Y+ +KH V+GL +++A EL  + +RVN + P  V T +    +  E           N    +  +  T   A         DV+NA+LFL S++ARYI+G
Sbjct:   52 ADELDQTAKDV-ENLGRK--AIVIHADVRDLESLTAEVDRAVSTLGRLDIVSANAGIASVPFLSHDIPD-NTWRQMIDINLTGVWHTAKVAVPHILAGERGGSIVLTSSAAGLKGYAQISHYSAAKHGVVGLMRSLALELAPHRVRVNSLHPTQVNTPM----IQNEGTYRIFSPDLENPTREDFEIASTTTNALPIPWVESVDVSNALLFLVSEDARYITG 265          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: YOXD_BACSU (Uncharacterized oxidoreductase yoxD OS=Bacillus subtilis GN=yoxD PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.111e-16
Identity = 49/138 (35.51%), Postives = 76/138 (55.07%), Query Frame = 1
Query:  241 FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLAL 654
            F   DV   + V  AV    E+ G +DI++NNAGIS        +    E+E +  +N+ GV+H  +     MI +  G II+I S AG  G     AY+ SK AVLGL +++  E+ K+ IRV+ ++P  VA+ +++
Sbjct:   59 FAAADVKDADQVNQAVAQVKEQLGDIDILINNAGIS--KFGGFLDLSADEWENIIQVNLMGVYHVTRAVLPEMIERKAGDIINISSTAGQRGAAVTSAYSASKFAVLGLTESLMQEVRKHNIRVSALTPSTVASDMSI 194          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: Y0419_STAS1 (Uncharacterized oxidoreductase SSP0419 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0419 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.111e-16
Identity = 49/133 (36.84%), Postives = 76/133 (57.14%), Query Frame = 1
Query:  253 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA 651
            DVT +E+V   V+ T EKFG +DI+VN+AG+  +    I E D+  +E + D+N+KG  + +      M+ Q+ G II+I S++G         Y+ SK AV  + + +  EL K G+RV  +SP  V T L+
Sbjct:   64 DVTHKEEVTELVEKTKEKFGQIDILVNSAGLMLSSA--ITEGDVEAWEAMIDVNIKGTLYTINAVLPSMLNQSSGHIINIASISGFEVTKKSTLYSASKAAVHSITQGLEKELAKTGVRVTSISPGMVDTPLS 194          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: BDH2_MOUSE (3-hydroxybutyrate dehydrogenase type 2 OS=Mus musculus GN=Bdh2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.111e-16
Identity = 65/224 (29.02%), Postives = 111/224 (49.55%), Query Frame = 1
Query:  145 FHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            F + GAKV   D+ ++  Q++    G +        DVTK+  +    D    +   +D++ N AG        I + +  +++   ++NV+ +F  +K     M+ Q  G II++ SVA +I G+     Y+ +K AV+GL K+VAA+  + GIR NCV P  V T      +   +  ++A+  F      N    G   +A +VA   ++LASDE+ Y++G
Sbjct:   26 FAREGAKVIATDINESKLQELESYRGIQTRVL----DVTKKRQI----DQFASEIERIDVLFNVAGF--VHHGTILDCEEKDWDFSMNLNVRSMFLMIKAFLPKMLAQKSGNIINMSSVASSIKGVENRCVYSATKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARDNPKEALKTF-----LNRQKTGRFASAEEVALLCVYLASDESAYVTG 234          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: Y2778_STAA8 (Uncharacterized oxidoreductase SAOUHSC_02778 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02778 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.675e-16
Identity = 52/179 (29.05%), Postives = 91/179 (50.84%), Query Frame = 1
Query:  142 LFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER 678
            L H+ GAKV +A       Q V   L  +        DVT +E+V   + +  + FG LDI++N+AG   +    I +  + E++ + D+N+KG  +  + A   M+ Q+ G +I+I S++G         Y+ +K AV  + + +  EL K G++V  +SP  V T +  A+ P + +
Sbjct:   25 LLHEEGAKVVLAGRNKEKLQNVANQLS-QDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQMLSS--KITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITAAYNPTDRK 200          
The following BLAST results are available for this feature:
BLAST of CX674980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
Y019_THEMA2.996e-1630.47Uncharacterized oxidoreductase TM_0019 OS=Thermoto... [more]
SDR1_PICAB2.996e-1632.80Short-chain type dehydrogenase/reductase OS=Picea ... [more]
FABG_BUCAP2.996e-1630.483-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]
Y2478_STAAM3.913e-1629.12Uncharacterized oxidoreductase SAV2478 OS=Staphylo... [more]
Y2266_STAAN3.913e-1629.12Uncharacterized oxidoreductase SA2266 OS=Staphyloc... [more]
LIMC_RHOER3.913e-1631.53(-)-trans-carveol dehydrogenase OS=Rhodococcus ery... [more]
YOXD_BACSU5.111e-1635.51Uncharacterized oxidoreductase yoxD OS=Bacillus su... [more]
Y0419_STAS15.111e-1636.84Uncharacterized oxidoreductase SSP0419 OS=Staphylo... [more]
BDH2_MOUSE5.111e-1629.023-hydroxybutyrate dehydrogenase type 2 OS=Mus musc... [more]
Y2778_STAA86.675e-1629.05Uncharacterized oxidoreductase SAOUHSC_02778 OS=St... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_9H02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9H02-O3-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674980 ID=CX674980; Name=CX674980; organism=Citrus sinensis; type=EST; length=820bp
GGCAATAGTTTTATTGTGTGAAATGTTCTACGTCTTCCTAAATGGCCTTA
GACGTGTTTTCTTTTCCTAACATTTTGTTGGTATAATTATTTTGTTTTAC
TTATTGTTTTAATAATTTAGATGGTTATGAGCACTGTACGCCTATTCCAC
AAGCATGGTGCAAAAGTTTGCATTGCAGATGTGCAAGACAATCTTGGTCA
GCAGGTCTGTCAATCCCTTGGTGGTGAGCCAGACACTTTTTTTTGCCATT
GTGATGTCACAAAGGAGGAAGATGTTTGCTCTGCTGTTGACCTCACAGTC
GAAAAATTTGGCACACTTGATATCATGGTCAATAATGCTGGCATTTCAGG
GGCTCCTTGTCCTGACATCCGTGAGGCGGACTTATCAGAGTTTGAGAAGG
TATTTGACATAAATGTGAAGGGAGTTTTCCATGGAATGAAGCATGCAGCT
CGGATCATGATCCCACAAACTAAGGGCACTATCATATCAATCTGCAGTGT
TGCAGGTGCCATTGGTGGTCTTGGCCCACATGCCTATACGGGGTCCAAGC
ATGCCGTTTTGGGACTCAACAAGAATGTTGCCGCTGAGCTTGGAAAATAT
GGCATCCGCGTGAACTGTGTTTCTCCTTATGCTGTTGCAACAGGCTTGGC
TTTGGCTCACTTGCCTGAAGAGGAGAGGACAGAGGATGCCATGGTAGGTT
TCCGTAATTTTGTTGCAAGAAATGCTAACATGCAGGGCACGGAGTTGACA
GCTAATGATGTGGCTAACGCTGTTCTCTTCCTAGCAAGTGATGAAGCTAG
GTACATAAGTGGAACGAATC
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