CX674979

Overview
NameCX674979
Unique NameCX674979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: CPNA_COMTE (Cyclopentanol dehydrogenase OS=Comamonas testosteroni GN=cpnA PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.267e-23
Identity = 70/198 (35.35%), Postives = 103/198 (52.02%), Query Frame = -3
Query:  286 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS 879
            DVT E     AVD  + +   LD +VNNAGI       +++    E++++F+INV+ VF G +     M    KG I+++ S+ G +G  G  AY  SK AV    K  A +L  + IRVN V P  +AT       P  ++  DA    R  +     + G      +V+ AVLFL SDEA ++ G+ L+VDGG+T+
Sbjct:   63 DVTNENHWTGAVDTILAESDRLDALVNNAGI--LTLKPVQDTSNEEWDRIFEINVRSVFLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIAT-------PMTQQILDAPQSARALL--GPTLLGRAAQPMEVSQAVLFLVSDEASFVHGSELVVDGGYTA 249          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: CPNA_COMS9 (Cyclopentanol dehydrogenase OS=Comamonas sp. (strain NCIMB 9872) GN=cpnA PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.267e-23
Identity = 70/198 (35.35%), Postives = 103/198 (52.02%), Query Frame = -3
Query:  286 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS 879
            DVT E     AVD  + +   LD +VNNAGI       +++    E++++F+INV+ VF G +     M    KG I+++ S+ G +G  G  AY  SK AV    K  A +L  + IRVN V P  +AT       P  ++  DA    R  +     + G      +V+ AVLFL SDEA ++ G+ L+VDGG+T+
Sbjct:   63 DVTNENHWTGAVDTILAESDRLDALVNNAGI--LTLKPVQDTSNEEWDRIFEINVRSVFLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIAT-------PMTQQILDAPQSARALL--GPTLLGRAAQPMEVSQAVLFLVSDEASFVHGSELVVDGGYTA 249          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: YGCW_ECOLI (Uncharacterized oxidoreductase ygcW OS=Escherichia coli (strain K12) GN=ygcW PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.655e-23
Identity = 66/180 (36.67%), Postives = 99/180 (55.00%), Query Frame = -3
Query:  292 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 831
            E+FGT+DI+VNNAGI       + +   ++++ + D+N+   F     AA+IMIPQ  G II+ICS+   +GG    AY+ +KHA+ G  K    ELG+Y I+VN ++P   AT + LA     E  +  +          AN  G      D+  A +FLAS  + Y++G  L+VDGG+
Sbjct:   90 ERFGTVDILVNNAGI--CKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHI------PANRWG---DTQDLMGAAVFLASPASNYVNGHLLVVDGGY 258          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: YXJF_BACSU (Uncharacterized oxidoreductase yxjF OS=Bacillus subtilis GN=yxjF PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.823e-23
Identity = 71/199 (35.68%), Postives = 105/199 (52.76%), Query Frame = -3
Query:  286 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMV-GFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS 879
            DVTKE  V   V++  +++G LDI+VNNAGI       I E     FE++  + +   F  MKH   IM  Q  G II+I SV G +G  G  AY  +KH V+GL K  A E   +GI VN + P  V T L    L +  +T +         V      Q   L+  ++A+  +FLAS++A+ ++G  +++DGG+T+
Sbjct:   60 DVTKEAQVADTVNVIQKQYGRLDILVNNAGIQHVA--PIEEFPTDTFEQLIKVMLTAPFIAMKHVFPIMKKQQFGRIINIASVNGLVGFAGKSAYNSAKHGVIGLTKVGALEGAPHGITVNALCPGYVDTQLVRNQLSDLSKTRNVPYDSVLEQVIFPLVPQKRLLSVKEIADYAVFLASEKAKGVTGQAVVLDGGYTA 256          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.823e-23
Identity = 69/198 (34.85%), Postives = 106/198 (53.54%), Query Frame = -3
Query:  295 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALA---HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 879
            +V   ++V + +   V +FG+LD++VNNAGI+      +      E++ V D N+KGVF+ ++ A   M+ Q  G II++ SV GA+G  G   Y  +K  V+GL K+ A EL   GI VN V+P  + + +  A    L E+  T+  +  F                  D+AN V FLASD+A+YI+G  + V+GG
Sbjct:   62 NVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQ--------------DTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.823e-23
Identity = 69/198 (34.85%), Postives = 106/198 (53.54%), Query Frame = -3
Query:  295 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALA---HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 879
            +V   ++V + +   V +FG+LD++VNNAGI+      +      E++ V D N+KGVF+ ++ A   M+ Q  G II++ SV GA+G  G   Y  +K  V+GL K+ A EL   GI VN V+P  + + +  A    L E+  T+  +  F                  D+AN V FLASD+A+YI+G  + V+GG
Sbjct:   62 NVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQ--------------DTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.823e-23
Identity = 69/198 (34.85%), Postives = 106/198 (53.54%), Query Frame = -3
Query:  295 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALA---HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 879
            +V   ++V + +   V +FG+LD++VNNAGI+      +      E++ V D N+KGVF+ ++ A   M+ Q  G II++ SV GA+G  G   Y  +K  V+GL K+ A EL   GI VN V+P  + + +  A    L E+  T+  +  F                  D+AN V FLASD+A+YI+G  + V+GG
Sbjct:   62 NVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQ--------------DTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.823e-23
Identity = 69/198 (34.85%), Postives = 106/198 (53.54%), Query Frame = -3
Query:  295 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALA---HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 879
            +V   ++V + +   V +FG+LD++VNNAGI+      +      E++ V D N+KGVF+ ++ A   M+ Q  G II++ SV GA+G  G   Y  +K  V+GL K+ A EL   GI VN V+P  + + +  A    L E+  T+  +  F                  D+AN V FLASD+A+YI+G  + V+GG
Sbjct:   62 NVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQ--------------DTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.823e-23
Identity = 69/198 (34.85%), Postives = 106/198 (53.54%), Query Frame = -3
Query:  295 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALA---HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 879
            +V   ++V + +   V +FG+LD++VNNAGI+      +      E++ V D N+KGVF+ ++ A   M+ Q  G II++ SV GA+G  G   Y  +K  V+GL K+ A EL   GI VN V+P  + + +  A    L E+  T+  +  F                  D+AN V FLASD+A+YI+G  + V+GG
Sbjct:   62 NVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQ--------------DTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: FABG_STAAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain COL) GN=fabG PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.823e-23
Identity = 69/198 (34.85%), Postives = 106/198 (53.54%), Query Frame = -3
Query:  295 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALA---HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 879
            +V   ++V + +   V +FG+LD++VNNAGI+      +      E++ V D N+KGVF+ ++ A   M+ Q  G II++ SV GA+G  G   Y  +K  V+GL K+ A EL   GI VN V+P  + + +  A    L E+  T+  +  F                  D+AN V FLASD+A+YI+G  + V+GG
Sbjct:   62 NVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQ--------------DTDIANTVAFLASDKAKYITGQTIHVNGG 243          
The following BLAST results are available for this feature:
BLAST of CX674979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
CPNA_COMTE1.267e-2335.35Cyclopentanol dehydrogenase OS=Comamonas testoster... [more]
CPNA_COMS91.267e-2335.35Cyclopentanol dehydrogenase OS=Comamonas sp. (stra... [more]
YGCW_ECOLI1.655e-2336.67Uncharacterized oxidoreductase ygcW OS=Escherichia... [more]
YXJF_BACSU2.823e-2335.68Uncharacterized oxidoreductase yxjF OS=Bacillus su... [more]
FABG_STAAW2.823e-2334.853-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAS2.823e-2334.853-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAR2.823e-2334.853-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAN2.823e-2334.853-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAM2.823e-2334.853-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAC2.823e-2334.853-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_9H02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9H02-O3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674979 ID=CX674979; Name=CX674979; organism=Citrus sinensis; type=EST; length=881bp
TTCAACACATACATCAACAAGTTTTCATAATCTAAGAAGTACATGCTTAC
GAGTTCTCAATAGTCCTAACAAGTAAACCCCAATCACATTTGCATCACAC
TTTCTTAAACGGTTCATTCTTATGCAACCCAATAATCTACCATGATACTT
GAAATATGGAATCAATTGCAGGTATCTAACTGAAATAACGAAGAAACTCA
AATGCTCCAATCACCTTTTATGCATCTAATTGTTGATTGGCGTGGAACCA
ATATTTTATCTAAAGACTCGAAGTGAATGATTCACAGATGTGAAGCCCCC
ATCAACCATCAGATTCGTTCCACTTATGTACCTAGCTTCATCACTTGCTA
GGAAGAGAACAGCGTTAGCCACATCATTAGCTGTCAACTCCGTGCCCTGC
ATGTTAGCATTTCTTGCAACAAAATTACGGAAACCTACCATGGCATCCTC
TGTCCTCTCCTCTTCAGGCAAGTGAGCCAAAGCCAAGCCTGTTGCAACAG
CATAAGGAGAAACACAGTTCACGCGGATGCCATATTTTCCAAGCTCAGCG
GCAACATTCTTGTTGAGTCCCAAAACGGCATGCTTGGACCCCGTATAGGC
ATGTGGGCCAAGACCACCAATGGCACCTGCAACACTGCAGATTGATATGA
TAGTGCCCTTAGTTTGTGGGATCATGATCCGAGCTGCATGCTTCATTCCA
TGGAAAACTCCCTTCACATTTATGTCAAATACCTTCTCAAACTCTGATAA
GTCCGCCTCACGGATGTCAGGACAAGGAGCCCCTGAAATGCCAGCATTAT
TGACCATGATATCAAGTGTGCCAAATTTTTCGACTGTGAGGTCAACAGCA
GAGCAAACATCTTCCTCCTTTGTGACATCAC
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