CX674979

Overview
NameCX674979
Unique NameCX674979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: DHRS4_PIG (Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.128e-14
Identity = 64/199 (32.16%), Postives = 96/199 (48.24%), Query Frame = -3
Query:  286 VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS 876
            V K ED    V + V   G +DI+V+NA ++     +I +A    ++K+  +NVK      K     M  +  G+++ + SV        LGP  Y  SK A+LGL KN+A EL    IRVNC++P  + T  +     ++ R E      R  + R  N +       D A  V FL S++A YI+G  ++V GG  S
Sbjct:   72 VGKAEDRERLVAMAVNLHGGVDILVSNAAVNPF-FGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGP--YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLR--IRRLGNPE-------DCAGIVSFLCSEDASYITGETVVVGGGTAS 258          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: Y2567_STAAR (Uncharacterized oxidoreductase SAR2567 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2567 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.086e-14
Identity = 43/142 (30.28%), Postives = 78/142 (54.93%), Query Frame = -3
Query:  454 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER 879
            DVTK+E+V   + +  + FG LDI++N+AG   +    I +  + E++ + D+N+KG  +  K A   M+ Q+ G +I+I S++G         Y+ +K AV  + + +  EL K G++V  +SP  V T +   + P + +
Sbjct:   61 DVTKKEEVDELIKMAQQTFGGLDIVINSAGQMLSS--KITDYQVDEWDSMIDVNIKGTLYTAKAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITATYNPTDRK 200          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: Y2403_STAAW (Uncharacterized oxidoreductase MW2403 OS=Staphylococcus aureus (strain MW2) GN=MW2403 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.086e-14
Identity = 43/145 (29.66%), Postives = 80/145 (55.17%), Query Frame = -3
Query:  445 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED 879
            DVT +E+V   + +  + FG LDI++N+AG   +    I +  + E++ + D+N+KG  + ++ A   M+ Q+ G +I+I S++G         Y+ +K AV  + + +  EL K G++V  +SP  V T +  A+ P + +  D
Sbjct:   61 DVTNKEEVDELIKIAQQTFGGLDIVINSAGQMLSS--KITDYQVDEWDSMIDVNIKGTLYTVQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITAAYNPSDRKKLD 203          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: Y2370_STAAS (Uncharacterized oxidoreductase SAS2370 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2370 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.086e-14
Identity = 43/145 (29.66%), Postives = 80/145 (55.17%), Query Frame = -3
Query:  445 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED 879
            DVT +E+V   + +  + FG LDI++N+AG   +    I +  + E++ + D+N+KG  + ++ A   M+ Q+ G +I+I S++G         Y+ +K AV  + + +  EL K G++V  +SP  V T +  A+ P + +  D
Sbjct:   61 DVTNKEEVDELIKIAQQTFGGLDIVINSAGQMLSS--KITDYQVDEWDSMIDVNIKGTLYTVQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITAAYNPSDRKKLD 203          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: DHRS4_BOVIN (Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.086e-14
Identity = 61/199 (30.65%), Postives = 96/199 (48.24%), Query Frame = -3
Query:  286 VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS 876
            V K ED    V   V+  G +DI+++NA +S      + +     ++K+ D+NVK      K     M  +  G+I+ + S+A       LGP  Y  SK A+LGL KN+A EL +  +RVNC++P  + T  +     +  R E     F+  + R    +       + A  V FL S++A YI+G  ++V GG  S
Sbjct:   72 VGKAEDRERLVATAVKLHGGVDILISNAAVSPF-FGSLMDVPEEVWDKILDVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGP--YNVSKTALLGLTKNLALELAESNVRVNCLAPGLIRTSFSRVLWEDPARQESIKATFQ--IKRIGKPE-------ECAGIVSFLCSEDASYITGETVVVAGGSLS 258          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: HCD2_DROME (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophila melanogaster GN=scu PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.336e-14
Identity = 54/153 (35.29%), Postives = 84/153 (54.90%), Query Frame = -3
Query:  451 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD----LSEFEKVFDINVKGVFHGMKHAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERT 879
            DVT E+DV +A+    +KFG LD+ VN AG + A        +    L +F++V +IN  G F+ ++ +A +M          +G I++  SVA   G +G  AY+ SK AV+G+   +A +L   GIR+  ++P    T + LA LPE+ RT
Sbjct:   58 DVTSEKDVSAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLSAGLMGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDLSTQGIRICTIAPGLFNTPM-LAALPEKVRT 209          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: FABG_PSEAE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Pseudomonas aeruginosa GN=fabG PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.336e-14
Identity = 63/195 (32.31%), Postives = 97/195 (49.74%), Query Frame = -3
Query:  295 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 879
            DV+ +E V + ++   +  G   I+VNNAGI+      +R  D  E+  V + N+  ++   K   R M     G II+I SV GA+G  G   Y  +K  + G  + +A E+G   I VN V+P  + T +    LPE +R  +A++G            G    A ++A  V FLASD A Y++G  + V+GG
Sbjct:   62 DVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLL-VRMKD-DEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMT-RELPEAQR--EALLG--------QIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGG 243          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: 3BHD_COMTE (3-beta-hydroxysteroid dehydrogenase OS=Comamonas testosteroni PE=1 SV=5)

HSP 1 Score: 78.5666 bits (192), Expect = 5.336e-14
Identity = 62/195 (31.79%), Postives = 92/195 (47.18%), Query Frame = -3
Query:  301 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK--YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVD 879
            DV+ E D    +     + GTL+++VNNAGI      D+    L +F ++  IN + VF G +     M  +T G+II++ SV+  +       Y+ SK AV  L +  A    K  Y IRVN + P  + T +  A LP+    E  +   +       N  G       +A  VLFLASDE+  +SG+ L  D
Sbjct:   61 DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPG--DMETGRLEDFSRLLKINTESVFIGCQQGIAAM-KETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPK------LNRAGRAYMPERIAQLVLFLASDESSVMSGSELHAD 246          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: FABG2_SYNY3 (3-oxoacyl-[acyl-carrier-protein] reductase 2 OS=Synechocystis sp. (strain PCC 6803) GN=fabG2 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.102e-14
Identity = 59/196 (30.10%), Postives = 99/196 (50.51%), Query Frame = -3
Query:  298 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPC-PDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA-RYISGTNLMVDG 879
            +VT  E + +A     +K G +  +V NAGI+     P +  AD   ++ V ++N+KGV + +K     M  +  G+I++I S++G  G +G   Y+ +K  V+G+ K++A E  +YG+R N V+P  + T + LA   +        + FR F               ++A AV FL S  A  Y++G  L V+G
Sbjct:   55 NVTDLESMTAAAAEITDKLGPVYGVVANAGITKDNFFPKLTPAD---WDAVLNVNLKGVAYSIKPFIEGMYERKAGSIVAISSISGERGNVGQTNYSATKAGVIGMMKSLAREGARYGVRANAVAPGFIDTEMTLAIREDIREKITKEIPFRRFG-----------KPEEIAWAVAFLLSPVASSYVTGEVLRVNG 236          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: Y2478_STAAM (Uncharacterized oxidoreductase SAV2478 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2478 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.189e-13
Identity = 43/145 (29.66%), Postives = 79/145 (54.48%), Query Frame = -3
Query:  445 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED 879
            DVT +E+V   + +  + FG LDI++N+AG   +    I +  + E++ + D+N+KG  +  + A   M+ Q+ G +I+I S++G         Y+ +K AV  + + +  EL K G++V  +SP  V T +  A+ P + +  D
Sbjct:   61 DVTNKEEVDELMKIAQQTFGGLDIVINSAGQMLSS--KITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITAAYNPSDRKKLD 203          
The following BLAST results are available for this feature:
BLAST of CX674979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
DHRS4_PIG3.128e-1432.16Dehydrogenase/reductase SDR family member 4 OS=Sus... [more]
Y2567_STAAR4.086e-1430.28Uncharacterized oxidoreductase SAR2567 OS=Staphylo... [more]
Y2403_STAAW4.086e-1429.66Uncharacterized oxidoreductase MW2403 OS=Staphyloc... [more]
Y2370_STAAS4.086e-1429.66Uncharacterized oxidoreductase SAS2370 OS=Staphylo... [more]
DHRS4_BOVIN4.086e-1430.65Dehydrogenase/reductase SDR family member 4 OS=Bos... [more]
HCD2_DROME5.336e-1435.293-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophi... [more]
FABG_PSEAE5.336e-1432.313-oxoacyl-[acyl-carrier-protein] reductase OS=Pseu... [more]
3BHD_COMTE5.336e-1431.793-beta-hydroxysteroid dehydrogenase OS=Comamonas t... [more]
FABG2_SYNY39.102e-1430.103-oxoacyl-[acyl-carrier-protein] reductase 2 OS=Sy... [more]
Y2478_STAAM1.189e-1329.66Uncharacterized oxidoreductase SAV2478 OS=Staphylo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_9H02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9H02-O3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674979 ID=CX674979; Name=CX674979; organism=Citrus sinensis; type=EST; length=881bp
TTCAACACATACATCAACAAGTTTTCATAATCTAAGAAGTACATGCTTAC
GAGTTCTCAATAGTCCTAACAAGTAAACCCCAATCACATTTGCATCACAC
TTTCTTAAACGGTTCATTCTTATGCAACCCAATAATCTACCATGATACTT
GAAATATGGAATCAATTGCAGGTATCTAACTGAAATAACGAAGAAACTCA
AATGCTCCAATCACCTTTTATGCATCTAATTGTTGATTGGCGTGGAACCA
ATATTTTATCTAAAGACTCGAAGTGAATGATTCACAGATGTGAAGCCCCC
ATCAACCATCAGATTCGTTCCACTTATGTACCTAGCTTCATCACTTGCTA
GGAAGAGAACAGCGTTAGCCACATCATTAGCTGTCAACTCCGTGCCCTGC
ATGTTAGCATTTCTTGCAACAAAATTACGGAAACCTACCATGGCATCCTC
TGTCCTCTCCTCTTCAGGCAAGTGAGCCAAAGCCAAGCCTGTTGCAACAG
CATAAGGAGAAACACAGTTCACGCGGATGCCATATTTTCCAAGCTCAGCG
GCAACATTCTTGTTGAGTCCCAAAACGGCATGCTTGGACCCCGTATAGGC
ATGTGGGCCAAGACCACCAATGGCACCTGCAACACTGCAGATTGATATGA
TAGTGCCCTTAGTTTGTGGGATCATGATCCGAGCTGCATGCTTCATTCCA
TGGAAAACTCCCTTCACATTTATGTCAAATACCTTCTCAAACTCTGATAA
GTCCGCCTCACGGATGTCAGGACAAGGAGCCCCTGAAATGCCAGCATTAT
TGACCATGATATCAAGTGTGCCAAATTTTTCGACTGTGAGGTCAACAGCA
GAGCAAACATCTTCCTCCTTTGTGACATCAC
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