CX674979

Overview
NameCX674979
Unique NameCX674979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: Y452_LISIN (Uncharacterized oxidoreductase Lin0452 OS=Listeria innocua GN=lin0452 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.717e-12
Identity = 49/148 (33.11%), Postives = 73/148 (49.32%), Query Frame = -3
Query:  439 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAM 879
            DVTK ED    V+L +E++G +D +  NAGI   +P   ++E    E+E++ DIN+KGV +G+       I Q  G II+  SVAG     G   Y  +K AV  L + +  E  + G  +   + Y  A    L     ++ TE  M
Sbjct:   62 DVTKREDNKKLVELAIERYGKVDAIFLNAGIMPNSPLSALKE---DEWEQMIDINIKGVLNGIAAVLPSFIAQKSGHIIATSSVAGLKAYPGGAVYGATKWAVRDLMEVLRMESAQEGTNIRTATIYPAAINTELLETITDKETEQGM 206          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: BPHB_PSEPU (Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=Pseudomonas putida GN=bphB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.717e-12
Identity = 51/135 (37.78%), Postives = 71/135 (52.59%), Query Frame = -3
Query:  484 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADL-SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL 879
            DV   ED   A    V KFG +D ++ NAGI        D+ E  L + F++VF INVKG  H +K     ++  ++G +I   S AG     G   YT +KHAV+GL + +A EL  Y +RVN V P  + + L
Sbjct:   59 DVRSLEDQKQAASRCVAKFGKIDTLIPNAGIWDYSTALIDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVA-SRGNVIFTISNAGFYPNGGGPLYTAAKHAVVGLVRELAFELAPY-VRVNGVGPGGINSDL 191          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: MTDH_AGABI (NADP-dependent mannitol dehydrogenase OS=Agaricus bisporus GN=mtdH PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 62/204 (30.39%), Postives = 95/204 (46.57%), Query Frame = -3
Query:  295 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAI-------GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 879
            DV+  + V   +       G +  ++ NAG+S   P  ++   D   F+ V+D+NV GVF+  +  A++ +  Q KG+I+   S++  I       G L    Y  SK A   L K +AAE    GIRVN +SP  V T    AH+ ++ R   A     + +  N   Q  E+T        + L SD A Y++G    +DGG
Sbjct:   69 DVSNTDIVTKTIQQIDADLGAISGLIANAGVSVVKPATELTHED---FKFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTD-QTAHMDKKIRDHQA-----SNIPLNRFAQPEEMTGQ-----AILLLSDHATYMTGGEYFIDGG 258          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: GRDH_ORYSJ (Glucose and ribitol dehydrogenase homolog OS=Oryza sativa subsp. japonica GN=Os05g0140800 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 59/182 (32.42%), Postives = 89/182 (48.90%), Query Frame = -3
Query:  295 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKG------TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 822
            G +DI+VNNA       P I +    + E+VF  N+   F   KHA + M  +  G      +II+  S+    G      YT +K A++   + +A +L + GIRVN V+P  + T L  A   EE+         R F ++     G     ++VA + +FLASD+A Y+SG  L V+GG
Sbjct:  125 GAIDILVNNAA-EQYERPSITDITEDDLERVFRTNIFSYFFMSKHAVKRMRDRRGGAGAGGCSIINTSSINAYKGNKTLLDYTATKGAIVAFTRALALQLAEEGIRVNGVAPGPIWTPLIPASFAEEK--------VRQFGSQVP--MGRAGQPSEVAPSFVFLASDDASYMSGQMLHVNGG 295          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: DECR2_DANRE (Peroxisomal 2,4-dienoyl-CoA reductase OS=Danio rerio GN=decr2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 61/203 (30.05%), Postives = 98/203 (48.28%), Query Frame = -3
Query:  280 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG--FTSVN 879
            DV + E + +AVD T++ FG +DI++NNA      CP       + F+ V +I+  G F+  K           G+I++I +  G  G  L  HA   +K A   + +++A E G  G+RVN V+P  ++       L       +    F +   + A          ++A+AVLFLAS  + Y++G+ L+ DGG   TS N
Sbjct:   93 DVRQPETILAAVDETLKTFGRVDILINNAA-GNFLCP-ATSLSFNAFKTVMEIDTMGTFNTSKVIYDKWFKDHGGSIVNISATLGYRGQALQVHA-GSAKAANDAMTRHLAVEWGPSGVRVNTVAPGPISGTEGYRRLGGSH--AETAGAFHSIPLQRAG------NKTEMAHAVLFLASRASSYVTGSVLVADGGAWLTSAN 284          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: CBR4_HUMAN (Carbonyl reductase family member 4 OS=Homo sapiens GN=CBR4 PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 60/196 (30.61%), Postives = 95/196 (48.47%), Query Frame = -3
Query:  295 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVG-FRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 879
            DV KE DV +  +   +  G ++ +VN AGI+      +      +       N+ G     K A R MI Q  G+I+++ S+ G  G  G   Y+ SK  ++G ++ +A E+ +  IRVN V+P  V T +    L EE   ++  +G F   +              +VA+AV+FL   E+ YI+G  L+VDGG
Sbjct:   56 DVAKEHDVQNTFEELEKHLGRVNFLVNAAGINRDGL--LVRTKTEDMVSQLHTNLLGSMLTCKAAMRTMIQQQGGSIVNVGSIVGLKGNSGQSVYSASKGGLVGFSRALAKEVARKKIRVNVVAPGFVHTDMT-KDLKEEHLKKNIPLGRFGETI--------------EVAHAVVFLL--ESPYITGHVLVVDGG 232          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: PECR_RAT (Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus GN=Pecr PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12
Identity = 57/197 (28.93%), Postives = 96/197 (48.73%), Query Frame = -3
Query:  295 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 879
            ++ KEE+V + V  T+ K+G ++ +VNNAG    AP  DI       ++ V + N+ G F+  K      +    G+I++I  +     G    A++G+  A V  L K +A      G+R+NCV+P  + +  A+ +  E  +T   M  F N  A+   +        +++  V FL S  A +I+G  + VDGG
Sbjct:   80 NIRKEEEVNNLVKSTLAKYGKINFLVNNAGGQFMAPAEDI---TAKGWQAVIETNLTGTFYMCKAVYNSWMKDHGGSIVNIIVLLN--NGFPTAAHSGAARAGVYNLTKTMALTWASSGVRINCVAPGTIYSQTAVDNYGELGQTMFEM-AFENIPAKRVGL------PEEISPLVCFLLSPAASFITGQLINVDGG 264          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: CBR4_DANRE (Carbonyl reductase family member 4 OS=Danio rerio GN=cbr4 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12
Identity = 63/195 (32.31%), Postives = 92/195 (47.18%), Query Frame = -3
Query:  295 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 879
            DV+KEE+V  A +   +  GT+  +VN AGI+      +  +   +   V   N+ G     K A R M+    G I++I SV G  G  G   Y+ SK  + G  +++A E+    IRVN V+P  + T +  A L EE       +G     A             +VA A+LFL   E+ YI+G  L+VDGG
Sbjct:   57 DVSKEEEVQKAFETINKTCGTVGFLVNAAGINRDAL--LLRSKSEDMLSVLHTNLLGSMLTCKAAVRNMLSHG-GAIVNIGSVVGVKGNAGQCVYSASKAGLEGFTRSLAKEVASRNIRVNLVAPGLIHTDMT-AGLAEEAAVRTIPLGRFGEPA-------------EVAQAMLFLL--ESPYITGQILLVDGG 232          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: CBR4_BOVIN (Carbonyl reductase family member 4 OS=Bos taurus GN=CBR4 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12
Identity = 59/195 (30.26%), Postives = 95/195 (48.72%), Query Frame = -3
Query:  295 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 879
            DV KE DV +  +   +  G ++ +VN AGI+      +   +  +       N+ G     + A + MI Q +G+I+++ SV G  G  G   Y+ SK  ++G ++ +A E+ K  IRVN V+P  + T +    L EE             + +N  + G    A DVA A +FL   E+ Y++G  L+VDGG
Sbjct:   56 DVAKEHDVQNTFEEIEKNLGRVNFLVNAAGINRDNL--LVRTNTEDMLSQLHTNLLGSMLTCRAALKTMIKQQRGSIVNVGSVVGLKGNSGQSVYSASKGGLVGFSRALAKEVAKKKIRVNVVAPGFIHTDMT-KDLNEE------------LLKKNIPL-GRFGDALDVAQAAVFLL--ESPYVTGHVLVVDGG 232          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: HCD2_MOUSE (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Mus musculus GN=Hsd17b10 PE=1 SV=4)

HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12
Identity = 52/152 (34.21%), Postives = 84/152 (55.26%), Query Frame = -3
Query:  454 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD----LSEFEKVFDINVKGVFHGMKHAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER 879
            +VT E+++ +A+ L  EKFG +D+ VN AGI+ A     ++ +    L +F++V ++N+ G F+ ++  A  M          +G II+  SVA   G +G  AY+ SK  + G+   +A +L   GIRV  ++P   AT L L  LPE+ R
Sbjct:   64 NVTSEKEIQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHQKKNKIHTLEDFQRVINVNLIGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIDGMTLPIARDLAPTGIRVVTIAPGLFATPL-LTTLPEKVR 214          
The following BLAST results are available for this feature:
BLAST of CX674979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
Y452_LISIN1.717e-1233.11Uncharacterized oxidoreductase Lin0452 OS=Listeria... [more]
BPHB_PSEPU1.717e-1237.78Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=... [more]
MTDH_AGABI2.242e-1230.39NADP-dependent mannitol dehydrogenase OS=Agaricus ... [more]
GRDH_ORYSJ2.242e-1232.42Glucose and ribitol dehydrogenase homolog OS=Oryza... [more]
DECR2_DANRE2.242e-1230.05Peroxisomal 2,4-dienoyl-CoA reductase OS=Danio rer... [more]
CBR4_HUMAN2.242e-1230.61Carbonyl reductase family member 4 OS=Homo sapiens... [more]
PECR_RAT2.928e-1228.93Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus ... [more]
CBR4_DANRE2.928e-1232.31Carbonyl reductase family member 4 OS=Danio rerio ... [more]
CBR4_BOVIN2.928e-1230.26Carbonyl reductase family member 4 OS=Bos taurus G... [more]
HCD2_MOUSE3.824e-1234.213-hydroxyacyl-CoA dehydrogenase type-2 OS=Mus musc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_9H02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9H02-O3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674979 ID=CX674979; Name=CX674979; organism=Citrus sinensis; type=EST; length=881bp
TTCAACACATACATCAACAAGTTTTCATAATCTAAGAAGTACATGCTTAC
GAGTTCTCAATAGTCCTAACAAGTAAACCCCAATCACATTTGCATCACAC
TTTCTTAAACGGTTCATTCTTATGCAACCCAATAATCTACCATGATACTT
GAAATATGGAATCAATTGCAGGTATCTAACTGAAATAACGAAGAAACTCA
AATGCTCCAATCACCTTTTATGCATCTAATTGTTGATTGGCGTGGAACCA
ATATTTTATCTAAAGACTCGAAGTGAATGATTCACAGATGTGAAGCCCCC
ATCAACCATCAGATTCGTTCCACTTATGTACCTAGCTTCATCACTTGCTA
GGAAGAGAACAGCGTTAGCCACATCATTAGCTGTCAACTCCGTGCCCTGC
ATGTTAGCATTTCTTGCAACAAAATTACGGAAACCTACCATGGCATCCTC
TGTCCTCTCCTCTTCAGGCAAGTGAGCCAAAGCCAAGCCTGTTGCAACAG
CATAAGGAGAAACACAGTTCACGCGGATGCCATATTTTCCAAGCTCAGCG
GCAACATTCTTGTTGAGTCCCAAAACGGCATGCTTGGACCCCGTATAGGC
ATGTGGGCCAAGACCACCAATGGCACCTGCAACACTGCAGATTGATATGA
TAGTGCCCTTAGTTTGTGGGATCATGATCCGAGCTGCATGCTTCATTCCA
TGGAAAACTCCCTTCACATTTATGTCAAATACCTTCTCAAACTCTGATAA
GTCCGCCTCACGGATGTCAGGACAAGGAGCCCCTGAAATGCCAGCATTAT
TGACCATGATATCAAGTGTGCCAAATTTTTCGACTGTGAGGTCAACAGCA
GAGCAAACATCTTCCTCCTTTGTGACATCAC
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