CX674979

Overview
NameCX674979
Unique NameCX674979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: FABG_AGGAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Aggregatibacter actinomycetemcomitans GN=fabG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.237e-11
Identity = 58/197 (29.44%), Postives = 95/197 (48.22%), Query Frame = -3
Query:  295 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPC-PDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 879
            DV+   +    +   VE  G    +V NAG++     P + + D   +++V   N+ G ++ +      MI + K G I+ I SV+G IG  G   Y+ SK  ++G  K +A EL K  I VNCV+P  + T +   ++P +E  +    G          M   E    +VA+AV FL  ++A Y++   + V+GG
Sbjct:   60 DVSCRSEAADKLTADVEAHGAYYGVVLNAGLTRDNAFPALTDED---WDRVLRTNLDGFYNVLHPIMMPMIRRRKAGRIVCITSVSGLIGNRGQVNYSASKAGIIGAAKALAVELAKRKITVNCVAPGLIDTDILDENVPIDEILKMIPAG---------RMGDPE----EVAHAVNFLMGEKAAYVTRQVIAVNGG 240          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: DCXR_BOVIN (L-xylulose reductase OS=Bos taurus GN=DCXR PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.237e-11
Identity = 54/178 (30.34%), Postives = 90/178 (50.56%), Query Frame = -3
Query:  292 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 822
            G +D++VNNA +  A      E     ++  F +N++ V    +  AR +I +   G I+++ S A   G      Y  +K A+  L K +A ELG + IRVN V+P  V T +  A   + ++ + AM+  R  + R A ++       +V + +LFL SD +   +G+ + VDGGF
Sbjct:   75 GPVDLLVNNAAV--AFLQPFLEVTKEAYDMSFSVNLRAVIQVSQIVARGLIARGAPGVIVNVSSQASQRGLTNHSVYCSTKGALDTLTKVMAVELGPHKIRVNAVNPTVVMTPMGQAAWSDPQKAK-AMLD-RIPLGRFAEVE-------NVVDTILFLLSDRSSMTTGSTVPVDGGF 241          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: BPHB_BURXL (Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=bphB PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.237e-11
Identity = 48/135 (35.56%), Postives = 70/135 (51.85%), Query Frame = -3
Query:  484 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADL-SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL 879
            DV   ED   A    V +FG +D ++ NAGI        D+ E  L + F++VF INVKG  H +K     ++  ++G +I   S AG     G   YT +KHA++GL + +A EL  Y +RVN V    + + L
Sbjct:   59 DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVA-SRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDL 191          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: T4HR_MAGGR (Tetrahydroxynaphthalene reductase OS=Magnaporthe grisea GN=MGG_02252 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.228e-11
Identity = 53/195 (27.18%), Postives = 96/195 (49.23%), Query Frame = -3
Query:  295 EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALA----HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 864
            ED+    +  V+ FG LDI+ +N+G+       +++    EF++VF IN +G F   + A + +  +  G +I + S+ G    +  HA Y+GSK A+    + +A ++    I VN V+P  + T +  A    ++P  E   +  V    + A   +         D+A  V FLAS++  +++G  + +DGG
Sbjct:   92 EDIVRMFEEAVKIFGKLDIVCSNSGV--VSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVD--EYAASAWSPLHRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG 280          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: Y3106_PSEAE (Uncharacterized oxidoreductase PA3106 OS=Pseudomonas aeruginosa GN=PA3106 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.522e-11
Identity = 58/197 (29.44%), Postives = 89/197 (45.18%), Query Frame = -3
Query:  289 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 879
            DV +E  V  +V   + +FG LD +V NA I+      +    L E+ +   +N+ G     K+    +     G I++I S           AY  SK  +L L   +AA LG   IRVN +SP  + T  A A       TE         +  + ++ G   T  DVA+ V +L S++A +++G   +VDGG T
Sbjct:   64 DVAQEGQVAMSVAEVLGQFGRLDGLVCNAAIANPRNTPLEALSLGEWTRTLAVNLTGPMLLAKYCTPYLRAHN-GAIVNIASTRAHQSEPDSEAYAASKGGLLALTHALAASLGP-DIRVNALSPGWIDTREA-AEREAAPLTE---------LDHDQHLVGRVGTVEDVASLVAWLLSEDAGFVTGQEFLVDGGMT 248          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: TRN1_DATST (Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.212e-11
Identity = 50/180 (27.78%), Postives = 83/180 (46.11%), Query Frame = -3
Query:  286 GTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS 822
            G L+I+VNNAG+       D  E D   +  +   N +  +H  + A  ++     G +I + S+AG         Y+ SK A+  + K++A E  K  IRVN V+P  + T L    + +    ++ +    NF+ +     G      +V+  + FL    A YI+G  +  DGGFT+
Sbjct:   98 GKLNILVNNAGVVIHKEAKDFTEKD---YNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEI---DNFIVKTP--MGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFTA 269          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: YVRD_BACSU (Uncharacterized oxidoreductase yvrD OS=Bacillus subtilis GN=yvrD PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.419e-11
Identity = 52/199 (26.13%), Postives = 95/199 (47.74%), Query Frame = -3
Query:  295 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERT--EDAMVGFRNFVARN--ANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 879
            D++K ++  + ++  V + G +DI+VNN G       D  +    E+ + F++NV       +H    M+ +  G I++I S AG         Y+ +K A++ L++ +A       + VN V P    T    +++    +   +D     +++   N   ++     TA +VAN ++FLASD A  I+GT   V+GG
Sbjct:   63 DLSKTDEAAAFIE-KVNEIGDIDILVNNLGFFEVK--DFADVTDEEWNQYFEVNVMSAVRTSRHFLPKMLAKNSGRILNIASEAGVKPLPTMIPYSMTKTALISLSRGMAEMTKGTNVTVNSVLPGPTWTEGVASYMEGAAQAAGQDTDTFIKDYFKVNEPTSLIQRYATAEEVANTIVFLASDAASAINGTAQRVEGG 258          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: BPHB_PSEPS (Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=Pseudomonas pseudoalcaligenes GN=bphB PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.419e-11
Identity = 48/128 (37.50%), Postives = 67/128 (52.34%), Query Frame = -3
Query:  505 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADL-SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSP 879
            DV   ED   A    V +FG +D ++ NAGI        D+ E  L + F++VF INVKG  H +K  A   +  ++G +I   S AG     G   YT +K A++GL + +A EL  Y +RVN V P
Sbjct:   58 DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVK--ALPALVASRGNVIFTISNAGFYPNGGGPLYTAAKQAIVGLVRELAFELAPY-VRVNGVGP 182          
The following BLAST results are available for this feature:
BLAST of CX674979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
FABG_AGGAC3.237e-1129.443-oxoacyl-[acyl-carrier-protein] reductase OS=Aggr... [more]
DCXR_BOVIN3.237e-1130.34L-xylulose reductase OS=Bos taurus GN=DCXR PE=2 SV... [more]
BPHB_BURXL3.237e-1135.56Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=... [more]
T4HR_MAGGR4.228e-1127.18Tetrahydroxynaphthalene reductase OS=Magnaporthe g... [more]
Y3106_PSEAE5.522e-1129.44Uncharacterized oxidoreductase PA3106 OS=Pseudomon... [more]
TRN1_DATST7.212e-1127.78Tropinone reductase 1 OS=Datura stramonium GN=TR1 ... [more]
YVRD_BACSU9.419e-1126.13Uncharacterized oxidoreductase yvrD OS=Bacillus su... [more]
BPHB_PSEPS9.419e-1137.50Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_9H02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9H02-O3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674979 ID=CX674979; Name=CX674979; organism=Citrus sinensis; type=EST; length=881bp
TTCAACACATACATCAACAAGTTTTCATAATCTAAGAAGTACATGCTTAC
GAGTTCTCAATAGTCCTAACAAGTAAACCCCAATCACATTTGCATCACAC
TTTCTTAAACGGTTCATTCTTATGCAACCCAATAATCTACCATGATACTT
GAAATATGGAATCAATTGCAGGTATCTAACTGAAATAACGAAGAAACTCA
AATGCTCCAATCACCTTTTATGCATCTAATTGTTGATTGGCGTGGAACCA
ATATTTTATCTAAAGACTCGAAGTGAATGATTCACAGATGTGAAGCCCCC
ATCAACCATCAGATTCGTTCCACTTATGTACCTAGCTTCATCACTTGCTA
GGAAGAGAACAGCGTTAGCCACATCATTAGCTGTCAACTCCGTGCCCTGC
ATGTTAGCATTTCTTGCAACAAAATTACGGAAACCTACCATGGCATCCTC
TGTCCTCTCCTCTTCAGGCAAGTGAGCCAAAGCCAAGCCTGTTGCAACAG
CATAAGGAGAAACACAGTTCACGCGGATGCCATATTTTCCAAGCTCAGCG
GCAACATTCTTGTTGAGTCCCAAAACGGCATGCTTGGACCCCGTATAGGC
ATGTGGGCCAAGACCACCAATGGCACCTGCAACACTGCAGATTGATATGA
TAGTGCCCTTAGTTTGTGGGATCATGATCCGAGCTGCATGCTTCATTCCA
TGGAAAACTCCCTTCACATTTATGTCAAATACCTTCTCAAACTCTGATAA
GTCCGCCTCACGGATGTCAGGACAAGGAGCCCCTGAAATGCCAGCATTAT
TGACCATGATATCAAGTGTGCCAAATTTTTCGACTGTGAGGTCAACAGCA
GAGCAAACATCTTCCTCCTTTGTGACATCAC
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