CX674979

Overview
NameCX674979
Unique NameCX674979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: FABG_SHIFL (3-oxoacyl-[acyl-carrier-protein] reductase OS=Shigella flexneri GN=fabG PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19
Identity = 69/199 (34.67%), Postives = 102/199 (51.26%), Query Frame = -3
Query:  283 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV 879
            +VT    + S ++    +FG +DI+VNNAGI+      +R  D  E+  + + N+  VF   K   R M+ +  G II+I SV G +G  G   Y  +K  ++G +K++A E+   GI VN V+P  + T +  A       ++D   G    V       G    A ++ANAV FLASDEA YI+G  L V+GG   V
Sbjct:   59 NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLL-MRMKD-EEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA------LSDDQRAGILAQVPA-----GRLGGAQEIANAVAFLASDEAAYITGETLHVNGGMYMV 244          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: FABG_ECOLI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Escherichia coli (strain K12) GN=fabG PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19
Identity = 69/199 (34.67%), Postives = 102/199 (51.26%), Query Frame = -3
Query:  283 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV 879
            +VT    + S ++    +FG +DI+VNNAGI+      +R  D  E+  + + N+  VF   K   R M+ +  G II+I SV G +G  G   Y  +K  ++G +K++A E+   GI VN V+P  + T +  A       ++D   G    V       G    A ++ANAV FLASDEA YI+G  L V+GG   V
Sbjct:   59 NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLL-MRMKD-EEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA------LSDDQRAGILAQVPA-----GRLGGAQEIANAVAFLASDEAAYITGETLHVNGGMYMV 244          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: UCPA_ECO57 (Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN=ucpA PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.195e-19
Identity = 69/202 (34.16%), Postives = 101/202 (50.00%), Query Frame = -3
Query:  289 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVF--DINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 879
            DV     V +A+    EK G +DI+VNNAG+    C      D+S+ ++ F  DIN+KGV++  K     MI +  G I+ + SV G  +   G  AY  +K A++GL K++A E  + GIRVN + P  V T +A  +A     E  E  +      +         E     V     FLASDE+ Y++GT  ++DGG T
Sbjct:   62 DVRDPASVAAAIKRAKEKEGRIDILVNNAGV----CRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLE-----VGELAAFLASDESSYLTGTQNVIDGGST 254          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: DHB14_BOVIN (17-beta-hydroxysteroid dehydrogenase 14 OS=Bos taurus GN=HSD17B14 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.603e-18
Identity = 72/198 (36.36%), Postives = 104/198 (52.53%), Query Frame = -3
Query:  295 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAP-CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 879
            DVT+EEDV + V  T+ +FG LD +VNNAG    P  P+  E     F ++ ++N+ G +   K A    + +++G +I+I S+ GAIG      Y  +K AV  + K +A +  +YG+RVNC+SP  + T L   LA       T D     R      A   G      +VA A +FLAS EA + +GT L+V GG
Sbjct:   62 DVTREEDVRTLVSETIRRFGRLDCIVNNAGYHPPPQWPE--ETSAQGFRQLLELNLLGTYTLTKLALP-HLRKSRGNVINISSLVGAIGQSQAVPYVATKGAVTAMTKALALDESQYGVRVNCISPGNIWTPLWEELA-----ASTPDPTATIRE--GTLAQPLGRMGQPAEVAAAAVFLAS-EATFCTGTELLVTGG 248          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: YOHF_ECOLI (Uncharacterized oxidoreductase yohF OS=Escherichia coli (strain K12) GN=yohF PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.094e-18
Identity = 65/192 (33.85%), Postives = 106/192 (55.21%), Query Frame = -3
Query:  280 AVDLTVEKFGTLDIMVNNAG-ISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN 849
            A++  +++ G +D++VNNAG ++ AP  D+      E+ K+F ++V G F   + AAR M+ Q +G  II+I SV          AYT +KHA+ GL K +A EL ++ I VN V+P A+AT +      + +   +  +  R F A            +++A+ V++L S+ A Y +G +L+VDGGF   N
Sbjct:   70 ALEKLIQRLGRIDVLVNNAGAMTKAPFLDMA---FDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALELVRHKILVNAVAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGA-----------THEIASLVVWLCSEGANYTTGQSLIVDGGFMLAN 247          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: FABG_SALTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhimurium GN=fabG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.094e-18
Identity = 67/199 (33.67%), Postives = 101/199 (50.75%), Query Frame = -3
Query:  283 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV 879
            +VT    + S ++    +FG +DI+VNNAGI+        + D  E+  + + N+  VF   K   R M+ +  G II+I SV G +G  G   Y  +K  ++G +K++A E+   GI VN V+P  + T +  A       ++D   G    V       G    A ++A+AV FLASDEA YI+G  L V+GG   V
Sbjct:   59 NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDD--EWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA------LSDDQRAGILAQVPA-----GRLGGAQEIASAVAFLASDEASYITGETLHVNGGMYMV 244          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: FABG_SALTI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.094e-18
Identity = 67/199 (33.67%), Postives = 101/199 (50.75%), Query Frame = -3
Query:  283 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV 879
            +VT    + S ++    +FG +DI+VNNAGI+        + D  E+  + + N+  VF   K   R M+ +  G II+I SV G +G  G   Y  +K  ++G +K++A E+   GI VN V+P  + T +  A       ++D   G    V       G    A ++A+AV FLASDEA YI+G  L V+GG   V
Sbjct:   59 NVTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDD--EWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA------LSDDQRAGILAQVPA-----GRLGGAQEIASAVAFLASDEASYITGETLHVNGGMYMV 244          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: DHG_BACME (Glucose 1-dehydrogenase OS=Bacillus megaterium PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.571e-18
Identity = 63/198 (31.82%), Postives = 94/198 (47.47%), Query Frame = -3
Query:  289 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 879
            DVT E DV + V   +++FG LD+M+NNAG+         E  LS++ KV D N+ G F G + A +  +    KGT+I++ SV   I       Y  SK  +  + + +A E    GIRVN + P A+ T +      + E+  D           +    G      ++A    +LAS EA Y++G  L  DGG T
Sbjct:   65 DVTVESDVINLVQSAIKEFGKLDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRAD---------VESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: DHG1_BACME (Glucose 1-dehydrogenase 1 OS=Bacillus megaterium GN=gdhI PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.571e-18
Identity = 63/198 (31.82%), Postives = 95/198 (47.98%), Query Frame = -3
Query:  289 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 879
            DVT E DV + V  ++++FG LD+M+NNAG+         E  LS++ KV D N+ G F G + A +  +    KGT+I++ SV   I       Y  SK  +  + + +A E    GIRVN + P A+ T +      + E+  D           +    G      ++A    +LAS EA Y++G  L  DGG T
Sbjct:   65 DVTVESDVINLVQSSIKEFGKLDVMINNAGMENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRAD---------VESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251          
BLAST of CX674979 vs. ExPASy Swiss-Prot
Match: UCPA_SALTY (Oxidoreductase ucpA OS=Salmonella typhimurium GN=ucpA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.664e-18
Identity = 72/215 (33.49%), Postives = 104/215 (48.37%), Query Frame = -3
Query:  289 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVF--DINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV---------------LFLASDEARYISGTNLMVDGGFT 879
            DV     V +AV    E  G +DI+VNNAG+    C      D+SE ++ F  DIN+KGV++  K     MI +  G I+ + SV G  +   G  AY  SK A++GL K++A E  + GIRVN + P  V T +A +                  +AR +N    E    ++A A+                FLASDE+ Y++GT  ++DGG T
Sbjct:   62 DVRDFASVQAAVARAKETEGRIDILVNNAGV----CRLGNFLDMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAES------------------IARQSNPDDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGST 254          
The following BLAST results are available for this feature:
BLAST of CX674979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
FABG_SHIFL5.509e-1934.673-oxoacyl-[acyl-carrier-protein] reductase OS=Shig... [more]
FABG_ECOLI5.509e-1934.673-oxoacyl-[acyl-carrier-protein] reductase OS=Esch... [more]
UCPA_ECO577.195e-1934.16Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN... [more]
DHB14_BOVIN1.603e-1836.3617-beta-hydroxysteroid dehydrogenase 14 OS=Bos tau... [more]
YOHF_ECOLI2.094e-1833.85Uncharacterized oxidoreductase yohF OS=Escherichia... [more]
FABG_SALTY2.094e-1833.673-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
FABG_SALTI2.094e-1833.673-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
DHG_BACME3.571e-1831.82Glucose 1-dehydrogenase OS=Bacillus megaterium PE=... [more]
DHG1_BACME3.571e-1831.82Glucose 1-dehydrogenase 1 OS=Bacillus megaterium G... [more]
UCPA_SALTY4.664e-1833.49Oxidoreductase ucpA OS=Salmonella typhimurium GN=u... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_9H02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9H02-O3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674979 ID=CX674979; Name=CX674979; organism=Citrus sinensis; type=EST; length=881bp
TTCAACACATACATCAACAAGTTTTCATAATCTAAGAAGTACATGCTTAC
GAGTTCTCAATAGTCCTAACAAGTAAACCCCAATCACATTTGCATCACAC
TTTCTTAAACGGTTCATTCTTATGCAACCCAATAATCTACCATGATACTT
GAAATATGGAATCAATTGCAGGTATCTAACTGAAATAACGAAGAAACTCA
AATGCTCCAATCACCTTTTATGCATCTAATTGTTGATTGGCGTGGAACCA
ATATTTTATCTAAAGACTCGAAGTGAATGATTCACAGATGTGAAGCCCCC
ATCAACCATCAGATTCGTTCCACTTATGTACCTAGCTTCATCACTTGCTA
GGAAGAGAACAGCGTTAGCCACATCATTAGCTGTCAACTCCGTGCCCTGC
ATGTTAGCATTTCTTGCAACAAAATTACGGAAACCTACCATGGCATCCTC
TGTCCTCTCCTCTTCAGGCAAGTGAGCCAAAGCCAAGCCTGTTGCAACAG
CATAAGGAGAAACACAGTTCACGCGGATGCCATATTTTCCAAGCTCAGCG
GCAACATTCTTGTTGAGTCCCAAAACGGCATGCTTGGACCCCGTATAGGC
ATGTGGGCCAAGACCACCAATGGCACCTGCAACACTGCAGATTGATATGA
TAGTGCCCTTAGTTTGTGGGATCATGATCCGAGCTGCATGCTTCATTCCA
TGGAAAACTCCCTTCACATTTATGTCAAATACCTTCTCAAACTCTGATAA
GTCCGCCTCACGGATGTCAGGACAAGGAGCCCCTGAAATGCCAGCATTAT
TGACCATGATATCAAGTGTGCCAAATTTTTCGACTGTGAGGTCAACAGCA
GAGCAAACATCTTCCTCCTTTGTGACATCAC
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