CN186388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_PEA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 7.749e-85 Identity = 161/176 (91.48%), Postives = 166/176 (94.32%), Query Frame = -1 Query: 230 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRSVPMAAAA 757 IRDPDPVVFLENELLYGESFPVSAEVLDSSF LPIGKAKIEREGKDVTITAFSK+VG +LKAAEIL KEGISAEVINLRSIRPLDR TINASVRKTNRLVTVEEGFPQHGVGAEIC SVIEESFGYLDA VERI GADVPMPYA NLER+ VP VEDIVRAAKRAC+RSVP+AAAA Sbjct: 184 IRDPDPVVFLENELLYGESFPVSAEVLDSSFWLPIGKAKIEREGKDVTITAFSKMVGFALKAAEILEKEGISAEVINLRSIRPLDRPTINASVRKTNRLVTVEEGFPQHGVGAEICTSVIEESFGYLDATVERIGGADVPMPYAGNLERLVVPHVEDIVRAAKRACHRSVPLAAAA 359
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2) HSP 1 Score: 300.056 bits (767), Expect = 8.866e-81 Identity = 150/169 (88.76%), Postives = 161/169 (95.27%), Query Frame = -1 Query: 251 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRS 757 IRDPDPVVFLENELLYGESFP+S E LDSSFCLPIGKAKIEREGKDVTI FSK+VG +LKAAE LA+EGISAEVINLRSIRPLDR+TINASVRKT+RLVTVEEGFPQHGV AEICASV+EESF YLDAPVERIAGADVPMPYAANLER+A+PQ+EDIVRA+KRACYRS Sbjct: 194 IRDPDPVVFLENELLYGESFPISEEALDSSFCLPIGKAKIEREGKDVTIVTFSKMVGFALKAAEKLAEEGISAEVINLRSIRPLDRATINASVRKTSRLVTVEEGFPQHGVCAEICASVVEESFSYLDAPVERIAGADVPMPYAANLERLALPQIEDIVRASKRACYRS 362
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_DICDI (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.176e-54 Identity = 107/169 (63.31%), Postives = 134/169 (79.29%), Query Frame = -1 Query: 251 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRS 757 IRD +PVV+LE+ELLY F +S + D + +PIGKAK+EREGKDVTI FS+IV ++AAEILAKEGISAEVINLR+IRP+D TI S++KTN+LVTVEEG+ Q G+GAEI A ++E +F YLDAP+ERI GADVPMPYA+NLE A+ Q ++IV AAKR R+ Sbjct: 187 IRDDNPVVYLESELLYNYKFDLSDQEQDKEYLVPIGKAKVEREGKDVTIVGFSRIVSNCMEAAEILAKEGISAEVINLRTIRPIDAETIVNSLKKTNKLVTVEEGWAQSGIGAEISALMMEHAFDYLDAPIERICGADVPMPYASNLENAAMVQTQNIVNAAKRVTQRN 355
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_MOUSE (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Mus musculus GN=Pdhb PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.604e-48 Identity = 99/165 (60.00%), Postives = 123/165 (74.55%), Query Frame = -1 Query: 266 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKR 757 IRD +PVV LENEL+YG +F + AE F +PIGKAKIER+G +T+ A S+ VG L+AA +L+KEGI EVINLR+IRP+D I ASV KTN LVTVE G+PQ GVGAEICA ++E +F +LDAP R+ GADVPMPYA LE +VPQV+DI+ A K+ Sbjct: 191 IRDNNPVVMLENELMYGVAFELPAEAQSKDFLIPIGKAKIERQGTHITVVAHSRPVGHCLEAAAVLSKEGIECEVINLRTIRPMDIEAIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKVLEDNSVPQVKDIIFAVKK 355
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_YEAST (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=PDB1 PE=1 SV=2) HSP 1 Score: 190.66 bits (483), Expect = 7.576e-48 Identity = 103/165 (62.42%), Postives = 122/165 (73.94%), Query Frame = -1 Query: 269 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKE-GISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 757 IRDP+PVVFLENELLYGESF +S E L F LP KAKIEREG D++I +++ V SL+AAEIL K+ G+SAEVINLRSIRPLD I +V+KTN L+TVE FP GVGAEI A V+E E+F YLDAP++R+ GADVP PYA LE A P IV+A K Sbjct: 197 IRDPNPVVFLENELLYGESFEISEEALSPEFTLPY-KAKIEREGTDISIVTYTRNVQFSLEAAEILQKKYGVSAEVINLRSIRPLDTEAIIKTVKKTNHLITVESTFPSFGVGAEIVAQVMESEAFDYLDAPIQRVTGADVPTPYAKELEDFAFPDTPTIVKAVK 360
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_BOVIN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Bos taurus GN=PDHB PE=1 SV=2) HSP 1 Score: 190.66 bits (483), Expect = 7.576e-48 Identity = 100/165 (60.61%), Postives = 122/165 (73.94%), Query Frame = -1 Query: 266 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKR 757 IRD +PVV LENEL+YG F + +E F +PIGKAKIER+G VTI A S+ VG L+AA +L+KEGI EVINLR+IRP+D TI SV KTN LVTVE G+PQ GVGAEICA ++E +F +LDAP R+ GADVPMPYA LE +VPQV+DI+ A K+ Sbjct: 191 IRDNNPVVVLENELMYGVPFELPSEAQSKDFLIPIGKAKIERQGTHVTIVAHSRPVGHCLEAATVLSKEGIECEVINLRTIRPMDIETIEGSVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSVPQVKDIIFAIKK 355
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_RAT (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus GN=Pdhb PE=1 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 9.894e-48 Identity = 97/165 (58.79%), Postives = 122/165 (73.94%), Query Frame = -1 Query: 266 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKR 757 IRD +PVV LENEL+YG +F + E F +PIGKAKIER+G +T+ A S+ VG L+AA +L+KEGI EVINLR+IRP+D I ASV KTN LVTVE G+PQ GVGAEICA ++E +F +LDAP R+ GADVPMPYA LE ++PQV+DI+ A K+ Sbjct: 191 IRDDNPVVMLENELMYGVAFELPTEAQSKDFLIPIGKAKIERQGTHITVVAHSRPVGHCLEAAAVLSKEGIECEVINLRTIRPMDIEAIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKK 355
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_SCHPO (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=pdb1 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.204e-47 Identity = 97/169 (57.40%), Postives = 128/169 (75.74%), Query Frame = -1 Query: 257 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEIL-AKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACY 757 IRDP+PVV LENE+LYG++FP+S E L F LP G AK+ER GKD+TI S V +L+AA+ L A G+ AEVINLRSIRPLD +TI ASV+KTNR+VTV++ + QHG+G+EI A ++E ++F YLDAPVER++ ADVPMPY+ +E +VP + +V AAK+ Y Sbjct: 196 IRDPNPVVVLENEILYGKTFPISKEALSEDFVLPFGLAKVERPGKDITIVGESISVVTALEAADKLKADYGVEAEVINLRSIRPLDINTIAASVKKTNRIVTVDQAYSQHGIGSEIAAQIMESDAFDYLDAPVERVSMADVPMPYSHPVEAASVPNADVVVAAAKKCLY 364
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_RHIME (Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium meliloti GN=pdhB PE=3 SV=2) HSP 1 Score: 188.348 bits (477), Expect = 3.760e-47 Identity = 95/168 (56.55%), Postives = 124/168 (73.81%), Query Frame = -1 Query: 254 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYR 757 IRDP+PV+FLENE+LYG+SF V LD F LPIGKA+I R GKD T+ +F + ++KAA L +GI E+I+LR+IRP+D T+ SV+KT RLVTVEEG+PQ VG EI V++++F YLDAP+ IAG DVPMPYAANLE++A+P V ++V A K CY+ Sbjct: 296 IRDPNPVIFLENEILYGQSFEVPK--LDD-FVLPIGKARIHRTGKDATLVSFGIGMTYAIKAAAELEAQGIDVEIIDLRTIRPMDLPTVIESVKKTGRLVTVEEGYPQSSVGTEIATRVMQQAFDYLDAPILTIAGKDVPMPYAANLEKLALPNVAEVVDAVKAVCYK 460
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_PONAB (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pongo abelii GN=PDHB PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.910e-47 Identity = 95/165 (57.58%), Postives = 121/165 (73.33%), Query Frame = -1 Query: 266 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKR 757 IRD +PVV LENEL+YG F E F +PIGKAKIER+G +T+ + S+ VG L+AA +L+KEG+ EVIN+R+IRP+D TI ASV KTN LVTVE G+PQ GVGAEICA ++E +F +LDAP R+ GADVPMPYA LE ++PQV+DI+ A K+ Sbjct: 191 IRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKK 355 The following BLAST results are available for this feature:
BLAST of CN186388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186388 ID=CN186388; Name=CN186388; organism=Citrus sinensis; type=EST; length=757bpback to top |