CN186388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_HUMAN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Homo sapiens GN=PDHB PE=1 SV=3) HSP 1 Score: 187.963 bits (476), Expect = 4.910e-47 Identity = 95/165 (57.58%), Postives = 121/165 (73.33%), Query Frame = -1 Query: 266 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKR 757 IRD +PVV LENEL+YG F E F +PIGKAKIER+G +T+ + S+ VG L+AA +L+KEG+ EVIN+R+IRP+D TI ASV KTN LVTVE G+PQ GVGAEICA ++E +F +LDAP R+ GADVPMPYA LE ++PQV+DI+ A K+ Sbjct: 191 IRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKK 355
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_ASCSU (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Ascaris suum PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.840e-45 Identity = 94/165 (56.97%), Postives = 115/165 (69.70%), Query Frame = -1 Query: 266 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKR 757 +RD +PV+ LENE+LYG FPVS E F LP G+AKI+R GKD+TI + S V +SL AA+ LAK GI EVINLR +RPLD T+ SV KT LVTVE G+P GVGAEI A V E ++FGYLD P+ R+ G DVPMPYA LE A+PQ D+V+ K+ Sbjct: 192 VRDDNPVICLENEILYGMKFPVSPEAQSPDFVLPFGQAKIQRPGKDITIVSLSIGVDVSLHAADELAKSGIDCEVINLRCVRPLDFQTVKDSVIKTKHLVTVESGWPNCGVGAEISARVTESDAFGYLDGPILRVTGVDVPMPYAQPLETAALPQPADVVKMVKK 356
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_CAEEL (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 1.337e-44 Identity = 94/166 (56.63%), Postives = 120/166 (72.29%), Query Frame = -1 Query: 263 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRA 757 IRD +PVVFLENE+LYG+SFPV EVL F +PIGKAKIER G VTI ++S+ V SL+AA+ L G+SAEVINLRS+RP D +I SV KT+ LV+VE G+P G+G+EI A V+E + F LDAP+ R+ G DVPMPY LE A+P E +V+A K++ Sbjct: 183 IRDDNPVVFLENEILYGQSFPVGDEVLSDDFVVPIGKAKIERAGDHVTIVSYSRGVEFSLEAAKQLEAIGVSAEVINLRSLRPFDFESIRQSVHKTHHLVSVETGWPFAGIGSEIAAQVMESDVFDQLDAPLLRVTGVDVPMPYTQTLEAAALPTAEHVVKAVKKS 348
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.132e-43 Identity = 91/170 (53.53%), Postives = 120/170 (70.59%), Query Frame = -1 Query: 248 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRSV 757 IRD +PV+FLENE+LYG SF V + +P G+AKI REG VTI FS V L+L AA +L + I EVI+LR+I+PLD TI SV+KTNRLV VEEG+ GVGA I + V++E+F YLDAP+E ++G DVP+P+A NLE++A+P D++ A K+ CY SV Sbjct: 161 IRDDNPVIFLENEILYGHSFDVPETIEP----IPFGQAKILREGSSVTIVTFSIQVKLALDAANVLQNDNIDCEVIDLRTIKPLDTDTIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPFAVNLEKLALPSESDVIEAVKKVCYYSV 326
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_ZYMMO (Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas mobilis GN=pdhB PE=3 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 1.478e-43 Identity = 94/168 (55.95%), Postives = 117/168 (69.64%), Query Frame = -1 Query: 254 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYR 757 IR DPVVFLE ELLYG++F V F LPIGKA+I REGKDVTI ++S V +L AAE LAKEGI AEVI+LR++RPLD+ TI S+ KTNR+VTVE+G+P + +EI A +EE F LDAPV R+ AD P PYA NLE+ + E I+ A ++ CYR Sbjct: 297 IRSDDPVVFLECELLYGKTFDVPKM---DDFVLPIGKARIIREGKDVTIVSYSIGVSFALTAAEALAKEGIDAEVIDLRTLRPLDKETILQSLAKTNRIVTVEDGWPVCSISSEIAAIAMEEGFDNLDAPVLRVTNADTPTPYAENLEKKGLVNPEAIIEAVRKVCYR 461
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_RICBR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia bellii (strain RML369-C) GN=pdhB PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.522e-43 Identity = 90/167 (53.89%), Postives = 119/167 (71.26%), Query Frame = -1 Query: 257 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACY 757 IRD +PV+FLENE+LYG SF +S V +P GKAK+ +EG VTI FS V L+L AA IL + I+ EVI+LR+I+PLD TI SV+KT RLV +EEG+ G+GA I A V++E+F YLDAPVE ++G DVP+PYA NLE++A+P D++ A K+ CY Sbjct: 161 IRDDNPVIFLENEILYGHSFDISENVEP----IPFGKAKVLKEGDSVTIVTFSIQVKLALDAANILQSDNINCEVIDLRTIKPLDIDTIIESVKKTGRLVVIEEGWFFAGIGATIAAIVMKEAFDYLDAPVEIVSGKDVPLPYAVNLEKLALPSEYDVINAVKKVCY 323
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_RICCN (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia conorii GN=pdhB PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.338e-43 Identity = 90/170 (52.94%), Postives = 118/170 (69.41%), Query Frame = -1 Query: 248 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRSV 757 IRD +PVVFLENE+LYG SF V + +P G+AKI REG VTI FS V L+L AA + + I EVI+LR+I+PLD TI SV+KTNRLV VEEG+ GVGA I + V++E+F YLDAP+E ++G D+P+PYA NLE +A+P D++ A K+ CY S+ Sbjct: 161 IRDDNPVVFLENEILYGHSFDVPKTIEP----IPFGQAKILREGSSVTIVTFSIQVKLALDAANFVQNDNIDCEVIDLRTIKPLDTETIIESVKKTNRLVVVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDLPLPYAVNLETLALPSESDVIEAVKKVCYYSI 326
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_RICPR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia prowazekii GN=pdhB PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.756e-42 Identity = 87/170 (51.18%), Postives = 121/170 (71.18%), Query Frame = -1 Query: 248 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRSV 757 IRD +PV+FLENE+LYG SF V ++++ +P KAKI +EG +VTI FS V L+L IL + I E+I+LR+I+PLD +I SV+KTNRLV VEEG+ GVGA I + V++E+F YLDAP+E ++G DVP+PYA NLE++A+P D++ A K+ CY S+ Sbjct: 161 IRDDNPVIFLENEILYGHSFDVP-DIIEP---IPFSKAKILKEGSNVTIVTFSIQVKLALDVVNILQNDNIDCELIDLRTIKPLDTDSIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPYAVNLEKLAMPSANDLIEAVKKVCYYSI 326
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_RICTY (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia typhi GN=pdhB PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.384e-41 Identity = 86/170 (50.59%), Postives = 121/170 (71.18%), Query Frame = -1 Query: 248 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRSV 757 IRD +PV+FLENE+LYG SF V ++++ +P KAKI +EG +VTI FS V L+L IL + I E+I+LR+I+PLD + I SV+KTNRLV VEEG+ GVGA I + V++E+F YLDAP+E ++G DVP+PYA NLE++A+P D++ A K+ CY ++ Sbjct: 161 IRDDNPVIFLENEILYGHSFDVP-DIIEP---IPFSKAKILKEGSNVTIVTFSIQVKLALDVVNILQNDNIDCELIDLRTIKPLDTNMIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPYAVNLEKLAMPSANDLIEAVKKVCYYTI 326
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_BACST (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus stearothermophilus GN=pdhB PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 4.933e-31 Identity = 77/164 (46.95%), Postives = 106/164 (64.63%), Query Frame = -1 Query: 266 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKR 757 IRD DPV+FLE+ LY SF EV + + +PIGKA I+REGKD+TI A+ +V SLKAA L KEGISAEV++LR+++PLD TI SV KT R + V+E Q G+ A + A + E + L+APV R+A D P+ A E + +P +D++ AK+ Sbjct: 162 IRDNDPVIFLEHLKLY-RSF--RQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPF-AQAESVWLPNFKDVIETAKK 321 The following BLAST results are available for this feature:
BLAST of CN186388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186388 ID=CN186388; Name=CN186388; organism=Citrus sinensis; type=EST; length=757bpback to top |