CN186388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ACOB_RALEH (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoB PE=1 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 3.198e-30 Identity = 66/164 (40.24%), Postives = 103/164 (62.80%), Query Frame = -1 Query: 266 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKR 757 IRD DPV+F E++ LYG + EV + ++ +P G+A I R+GKDV+I + +V +L+AA LAKEGI AE+++LR++ PLD T+ SV T RLV V+E P+ + +I A V +++FG L A +E + P+P++ LE + +P I AA++ Sbjct: 172 IRDNDPVIFCEHKNLYG----LEGEVPEGAYAIPFGEANIVRDGKDVSIVTYGLMVHRALEAAATLAKEGIEAEIVDLRTLSPLDMDTVLESVENTGRLVVVDEASPRCNIATDISAQVAQQAFGALKAGIEMVCPPHTPVPFSPTLEDLYIPSAAQIAAAARK 331
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_CHAGL (Pyruvate dehydrogenase E1 component subunit beta OS=Chaetosphaeridium globosum GN=pdhB PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.617e-29 Identity = 62/166 (37.35%), Postives = 108/166 (65.06%), Query Frame = -1 Query: 260 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRAC 757 IR+ +PV+F E+ LLY ++ +++ + L + KA++ R G D+TI +S++ L+AA++L +G E+I++ S++PLD TI+ SVRKT++++ VEE G+GA + A+++E+ F YLDAP++ ++ DVP PY+ LE + V Q I++A + C Sbjct: 162 IRNDNPVIFFEHVLLYN----LNENLIEQEYLLCLEKAEVVRPGNDITILTYSRMRHHVLQAAKVLVNKGYDPEIIDILSLKPLDMGTISLSVRKTHKVLIVEECMRTGGIGASLRAAILEDLFDYLDAPIQCLSSQDVPTPYSGPLEELTVIQPNQIIQAVEEMC 323
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_PORPU (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra purpurea GN=pdhB PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.668e-28 Identity = 65/163 (39.88%), Postives = 102/163 (62.58%), Query Frame = -1 Query: 269 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 757 IRD +PVVF E+ LLY + E+ + + +P+ KA++ R+GKD+TI +S++ +A +L +G EV++L S++PLD +I+ SV+KT+R++ VEE G+GAE+ A + E F LDAPV R++ D+P PY +LE+ V Q I+ A K Sbjct: 162 IRDNNPVVFFEHVLLYN----LQEEIPEDEYLIPLDKAEVVRKGKDITILTYSRMRHHVTEALPLLLNDGYDPEVLDLISLKPLDIDSISVSVKKTHRVLIVEECMKTAGIGAELIAQINEHLFDELDAPVVRLSSQDIPTPYNGSLEQATVIQPHQIIDAVK 320
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_STAES (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.534e-27 Identity = 69/163 (42.33%), Postives = 104/163 (63.80%), Query Frame = -1 Query: 269 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 757 I+ DPVV+LE+ LY SF EV + + + IGKA +++EG D+T+ ++ +V SLKAAE L K+G S EVI+LR+++P+D T+ ASV KT R V V+E Q GVGA++ A + E + L+AP+ R+A +D P+ E + +P +DI+ AK Sbjct: 162 IQSNDPVVYLEHMKLY-RSF--REEVPEEEYKIDIGKANVKKEGNDITLISYGAMVQESLKAAEELEKDGYSVEVIDLRTVQPIDIDTLVASVEKTGRAVVVQEAQRQAGVGAQVAAELAERAILSLEAPIARVAASDTIYPF-TQAENVWLPNKKDIIEQAK 320
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_STAEQ (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.534e-27 Identity = 69/163 (42.33%), Postives = 104/163 (63.80%), Query Frame = -1 Query: 269 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 757 I+ DPVV+LE+ LY SF EV + + + IGKA +++EG D+T+ ++ +V SLKAAE L K+G S EVI+LR+++P+D T+ ASV KT R V V+E Q GVGA++ A + E + L+AP+ R+A +D P+ E + +P +DI+ AK Sbjct: 162 IQSNDPVVYLEHMKLY-RSF--REEVPEEEYKIDIGKANVKKEGNDITLISYGAMVQESLKAAEELEKDGYSVEVIDLRTVQPIDIDTLVASVEKTGRAVVVQEAQRQAGVGAQVAAELAERAILSLEAPIARVAASDTIYPF-TQAENVWLPNKKDIIEQAK 320
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_PORYE (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra yezoensis GN=pdhB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.534e-27 Identity = 67/163 (41.10%), Postives = 100/163 (61.35%), Query Frame = -1 Query: 269 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 757 IRD +PVVF E+ LLY + E+ + LP+ K + R+GKD+TI +S++ ++A L KEG EVI+L S++PLD +I+ SV+KT++++ VEE G+GAE+ A + E F LDAPV R++ D+P PY +LE+ V Q IV + K Sbjct: 162 IRDNNPVVFFEHVLLYN----LQEEIPQEEYFLPLNKVEFVRKGKDITILTYSRMRHHVIQALPALLKEGYDPEVIDLISLKPLDIDSISISVKKTHKVLIVEECMKTAGIGAELIAQINEYLFDELDAPVVRLSSQDIPTPYNGSLEQATVIQPSQIVDSVK 320
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_CYAME (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon merolae GN=pdhB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.534e-27 Identity = 64/163 (39.26%), Postives = 100/163 (61.35%), Query Frame = -1 Query: 269 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 757 IRD +PV+FLE+ LLY + E+ + LP+ KA++ REG DVTI +S+++ ++A + L +G++ EVI+L S++P+D T+ SV KT++ + VEE G+ AE+ A + +F LDAP+ R++ DVP PY LE+ + Q IV A K Sbjct: 163 IRDNNPVLFLEHVLLYN----LKQEIPKQEYVLPLDKAQVVREGSDVTIITYSRMLHHVMQAVKQLVAQGMNPEVIDLISLKPIDLETLVTSVSKTHKAIIVEECMQTGGIAAEVMAQIYSHAFDELDAPIRRLSSKDVPTPYNGYLEQACLVQPTQIVEAVK 321
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_STAAW (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MW2) GN=pdhB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.309e-27 Identity = 71/163 (43.56%), Postives = 101/163 (61.96%), Query Frame = -1 Query: 269 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 757 IR DPVV+LE+ LY SF EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EVI+LR+++P+D TI ASV KT R V V+E Q GVGA + A + E + L+AP+ R+A AD P+ E + +P DI+ AK Sbjct: 162 IRSNDPVVYLEHMKLY-RSF--REEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPF-TQAENVWLPNKNDIIEKAK 320
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_STAAU (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus GN=pdhB PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.309e-27 Identity = 71/163 (43.56%), Postives = 101/163 (61.96%), Query Frame = -1 Query: 269 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 757 IR DPVV+LE+ LY SF EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EVI+LR+++P+D TI ASV KT R V V+E Q GVGA + A + E + L+AP+ R+A AD P+ E + +P DI+ AK Sbjct: 162 IRSNDPVVYLEHMKLY-RSF--REEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPF-TQAENVWLPNKNDIIEKAK 320
BLAST of CN186388 vs. ExPASy Swiss-Prot
Match: ODPB_STAAS (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MSSA476) GN=pdhB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.309e-27 Identity = 71/163 (43.56%), Postives = 101/163 (61.96%), Query Frame = -1 Query: 269 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 757 IR DPVV+LE+ LY SF EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EVI+LR+++P+D TI ASV KT R V V+E Q GVGA + A + E + L+AP+ R+A AD P+ E + +P DI+ AK Sbjct: 162 IRSNDPVVYLEHMKLY-RSF--REEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPF-TQAENVWLPNKNDIIEKAK 320 The following BLAST results are available for this feature:
BLAST of CN186388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186388 ID=CN186388; Name=CN186388; organism=Citrus sinensis; type=EST; length=757bpback to top |