CX674977

Overview
NameCX674977
Unique NameCX674977
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674977 vs. ExPASy Swiss-Prot
Match: OPT_SCHPO (Uncharacterized oligopeptide transporter C29B12.10c OS=Schizosaccharomyces pombe GN=SPAC29B12.10c PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.079e-39
Identity = 83/215 (38.60%), Postives = 116/215 (53.95%), Query Frame = -3
Query:  210 KTYGYISMVQALGFLGDFKLGHYMKVPPKSMFVVQLVGTIVASTVYFGTAWWLLTSVEHICNPSLLPEGSPWTCPGDDVFYNASIIWGVVGPLRMFTNYGNYPQMNWFFLIGFLAPFPVWLLSRKFPEKKWIKNIHMXXXXXXXXXXXXAKAVNYLSWGAVGIFFNYYVYRRFKGWWARHTYILSAALDAGVAFMGVFLYFTLQSQGIFGPDWWG 854
            K YG+I M Q L F  D KL  YMK+PP+ +F VQL  TI+          W+   +  IC  S   + + +TCP     YNAS+IWG +GP +MF+    Y  + +FFLIG +APF  W L ++FP K WI  ++             A  +NY SW  VG  FNY + +R   WW ++ Y+L+AA+D+GVA  GV ++  +   G     WWG
Sbjct:  613 KLYGFIPMRQGLEFSRDLKLAQYMKIPPRILFFVQLFATILGGITQVAVQEWMNYHIPGICTTS---QSNGFTCPNGRSIYNASLIWGAIGPAKMFSKGKPYYPLIFFFLIGAVAPFITWGLRKRFP-KSWIGKLNAPVLFTGPGNIPPATGINYSSWAIVGFIFNYVIRKRAIHWWRKYNYVLAAAMDSGVAVAGVVIFLCVSYPG-GKITWWG 822          
BLAST of CX674977 vs. ExPASy Swiss-Prot
Match: YQJC_SCHPO (Uncharacterized oligopeptide transporter C1840.12 OS=Schizosaccharomyces pombe GN=SPCC1840.12 PE=3 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 6.702e-30
Identity = 71/240 (29.58%), Postives = 116/240 (48.33%), Query Frame = -3
Query:  141 FKTYGYISMVQALGFLGDFKLGHYMKVPPKSMFVVQLVGTIVASTVYFGTAWWLLTSVEHICNPSLLPEGSPWTCPGDDVFYNASIIWGVVGPLRMFTNYGNYPQMNWFFLIGFLAPFPVWLLSRKFPEKKWIKNIHMXXXXXXXXXXXXAKAVNYLSWGAVGIFFNYYVYRRFKGWWARHTYILSAALDAGVAFMGVFLYF-TLQSQGIFGPDWWGLAATDHCPLAKCPIAPGIKVKGC 857
            F ++G+ ++  A+      K+GHYMKVPP+ +  +     I +S V      W++  V  +C  +     +  TC      +N+ +IWG+VG   +F++ G Y  + WFFL+G +    V+LL   FP+  W K+++                +NY +W AV   FNY + R +  WW ++  I +AA+D GVA  G+F+YF  + + G     WWG   +          + G   KGC
Sbjct:  553 FYSFGFGTLQHAMHMTQSAKIGHYMKVPPRLVAALLFTSGIWSSLVNSAVTGWIMYHVRDVCTSNA---ENNMTCRSPKTQFNSHLIWGLVGN-HIFSSDGRYSFVMWFFLVGAVVSVVVYLLQISFPKSSW-KHVNPALLLGGAAQIPSVTGINYSTWAAVAFCFNYLIRRGYYSWWKKYNLITAAAMDCGVAIAGLFIYFCVVYTGGSSNFSWWGTTVS----------SAGCDKKGC 777          
BLAST of CX674977 vs. ExPASy Swiss-Prot
Match: OPT1_YEAST (Oligopeptide transporter 1 OS=Saccharomyces cerevisiae GN=OPT1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.816e-28
Identity = 71/216 (32.87%), Postives = 113/216 (52.31%), Query Frame = -3
Query:  210 FKTYGYISMVQALGFLGDFKLGHYMKVPPKSMFVVQLVGTIVASTVYFGTAWWLLTSVEHICNPSLLPEGSPWTCPGDDVFYNASIIWGVVGPLRMFTNYGNYPQMNWFFLIGFLAPFPVWLLSRKFPEKKWIKNIHMXXXXXXXXXXXXAKAVNYLSWGAVGIFFNYYVYRRFKGWWARHTYILSAALDAGVAFMGVFLYFTLQSQGIFGPDWWG 857
            FK YG+I M Q L    D KL  YMKV P+ +F VQ+  TI++  V  G   W++ +++ +C     P G  +TC      +NASIIW +  P  +F++   Y  + WFFLIG L P  V+ +  KFP+ K+ K+IH             +   NY  + A+    N  + +R++ W+ ++ +++ A ++AGVA   V ++  +Q  G     WWG
Sbjct:  561 FKLYGFIVMRQGLNLSRDLKLAMYMKVSPRLIFAVQIYATIISGMVNVGVQEWMMHNIDGLCTTD-QPNG--FTCANGRTVFNASIIWSL--PKYLFSSGRIYNPLMWFFLIGLLFPLAVYAVQWKFPKFKFAKHIHTPVFFTGPGNIPPSTPYNYSLFFAMSFCLN-LIRKRWRAWFNKYNFVMGAGVEAGVAISVVIIFLCVQYPG-GKLSWWG 769          
BLAST of CX674977 vs. ExPASy Swiss-Prot
Match: OPT2_YEAST (Oligopeptide transporter 2 OS=Saccharomyces cerevisiae GN=OPT2 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.717e-22
Identity = 63/217 (29.03%), Postives = 100/217 (46.08%), Query Frame = -3
Query:  210 KTYGYISMVQALGFLGDFKLGHYMKVPPKSMFVVQLVGTIVASTVYFGTAWWLLTSVEHICNPSLLPEGSPWTCPGDDVFYNASIIWGVVGPLRMFTNYGNYPQMNWFFLIGFLAP--FPVWLLSRKFPEKKWIKNIHMXXXXXXXXXXXXAKAVNYLSWGAVGIFFNYYVYRRFKGWWARHTYILSAALDAGVAFMGVFLYFTLQSQGIFGPDWWG 854
            K +GY    QA  ++ + K+ HY K+PP ++F  Q V   +   V  G   W +++++  C P    + + +TCP    +YNAS++WG +GP R+F NY  YP   W +LIG      F VW    KF  + +     M               + Y S   V     YY+ R     W ++ Y+LSA    G+    + ++F +Q +     +WWG
Sbjct:  636 KAFGYNIDGQADNYVSNLKIAHYCKIPPMALFRGQCVIVFIQIFVNLGVLNWQISNIKDFCTPH---QNAKFTCPDAVTYYNASVVWGAIGPKRIF-NY-IYPIFKWCWLIGACIGIFFGVWKRWGKFYPRYFDP---MLFVGGMLNMSPPYNLMYYTSGMIVSYISQYYMKRHHLNLWEKYNYVLSAGFSTGLVLSAIIIFFAVQYKDT-AFNWWG 843          
The following BLAST results are available for this feature:
BLAST of CX674977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
OPT_SCHPO2.079e-3938.60Uncharacterized oligopeptide transporter C29B12.10... [more]
YQJC_SCHPO6.702e-3029.58Uncharacterized oligopeptide transporter C1840.12 ... [more]
OPT1_YEAST2.816e-2832.87Oligopeptide transporter 1 OS=Saccharomyces cerevi... [more]
OPT2_YEAST6.717e-2229.03Oligopeptide transporter 2 OS=Saccharomyces cerevi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_9H01_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9H01-O1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674977 ID=CX674977; Name=CX674977; organism=Citrus sinensis; type=EST; length=865bp
TTTTTTTTTTTTTTTTTAATCATAAATGATACCATATTTTATTTTTCCAA
ATGAAATTTACAGCTTTGTTATCTACATTCATTCTTTCATGAGTTGATAA
CTTGGTTAATGGGAATTTCTGCTGCAACTCAGGCCACTGGGCATCCTTTC
ACCTTTATCCCTGGTGCGATGGGGCATTTTGCCAGAGGACAATGATCAGT
AGCAGCCAGACCCCACCAGTCTGGACCAAAGATACCTTGGGATTGAAGGG
TGAAGTAAAGAAACACACCCATGAAGGCAACCCCAGCATCCAAAGCTGCT
GATAAAATATAGGTATGCCTAGCCCACCATCCCTTGAACCTTCTGTAAAC
ATAATAGTTGAAGAAAATTCCAACGGCTCCCCAACTCAAATAGTTCACAG
CCTTAGCTGATGGCAAACTTCCTGGACCAGCCAAGAGAAGAGGCATGTGA
ATATTCTTGATCCATTTTTTTTCAGGGAATTTGCGCGAAAGCAGCCACAC
TGGAAATGGGGCAAGAAAGCCTATTAGGAAGAACCAGTTCATCTGTGGGT
AGTTGCCGTAGTTTGTGAACATTCTGAGTGGTCCAACAACTCCCCAGATG
ATTGAAGCATTGTAGAAAACATCATCACCAGGACATGTCCAGGGGCTCCC
CTCCGGCAACAAACTTGGGTTGCAGATGTGTTCAACAGATGTAAGAAGCC
ACCACGCTGTGCCGAAGTAGACAGTTGAAGCAACTATGGTTCCCACTAAC
TGAACAACGAACATGGATTTGGGAGGGACTTTCATATAGTGACCTAATTT
GAAGTCTCCAAGAAAACCAAGGGCTTGGACCATGCTGATATAACCATAGG
TCTTGAAAGCCACAT
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