CN186385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODPA_STAAN (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain N315) GN=pdhA PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.770e-35 Identity = 78/180 (43.33%), Postives = 114/180 (63.33%), Query Frame = -1 Query: 235 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHS-TSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKE 771 NFAA +AP +F+ +NN +AIST S+Q ++ + K A GI I+VDG DALAVY A + AR+ A++ + P L+E +TYR G H+ DD T+YRT DE W+ ++ P+ RFR ++E +G W+E +E E+ K + AI+ A+ TEK +T L +Y+ P NLAEQ + KE Sbjct: 188 NFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNTEKQTVTSLMEIMYEDMPQNLAEQYEIYKE 366
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODPA_STAAM (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhA PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.770e-35 Identity = 78/180 (43.33%), Postives = 114/180 (63.33%), Query Frame = -1 Query: 235 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHS-TSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKE 771 NFAA +AP +F+ +NN +AIST S+Q ++ + K A GI I+VDG DALAVY A + AR+ A++ + P L+E +TYR G H+ DD T+YRT DE W+ ++ P+ RFR ++E +G W+E +E E+ K + AI+ A+ TEK +T L +Y+ P NLAEQ + KE Sbjct: 188 NFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNTEKQTVTSLMEIMYEDMPQNLAEQYEIYKE 366
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODPA_STAAC (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain COL) GN=pdhA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.770e-35 Identity = 78/180 (43.33%), Postives = 114/180 (63.33%), Query Frame = -1 Query: 235 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHS-TSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKE 771 NFAA +AP +F+ +NN +AIST S+Q ++ + K A GI I+VDG DALAVY A + AR+ A++ + P L+E +TYR G H+ DD T+YRT DE W+ ++ P+ RFR ++E +G W+E +E E+ K + AI+ A+ TEK +T L +Y+ P NLAEQ + KE Sbjct: 188 NFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNTEKQTVTSLMEIMYEDMPQNLAEQYEIYKE 366
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODPA_STAES (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.285e-34 Identity = 77/180 (42.78%), Postives = 114/180 (63.33%), Query Frame = -1 Query: 235 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHS-TSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKE 771 NFA+ +AP +F+ +NN +AIST S+Q ++ + K + GI I+VDG DALAVY A ARE A++ + P ++E LTYR G H+ DD T+YRT DE W+ ++ P+ RFR ++E +G W+E +E E+ K ++ AI+ A+ TEK +T L +Y+ P NLAEQ + KE Sbjct: 188 NFASAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAISVGIPGIQVDGMDALAVYQATLEARERAVAGEGPTVIETLTYRYGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKYLEAKGLWNEDKENEVVERAKSEIKAAIKEADNTEKQTVTSLMDIMYEEMPQNLAEQYEIYKE 366
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODPA_STAEQ (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.285e-34 Identity = 77/180 (42.78%), Postives = 114/180 (63.33%), Query Frame = -1 Query: 235 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHS-TSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKE 771 NFA+ +AP +F+ +NN +AIST S+Q ++ + K + GI I+VDG DALAVY A ARE A++ + P ++E LTYR G H+ DD T+YRT DE W+ ++ P+ RFR ++E +G W+E +E E+ K ++ AI+ A+ TEK +T L +Y+ P NLAEQ + KE Sbjct: 188 NFASAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAISVGIPGIQVDGMDALAVYQATLEARERAVAGEGPTVIETLTYRYGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKYLEAKGLWNEDKENEVVERAKSEIKAAIKEADNTEKQTVTSLMDIMYEEMPQNLAEQYEIYKE 366
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODPA_BACST (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus stearothermophilus GN=pdhA PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 2.052e-32 Identity = 76/180 (42.22%), Postives = 116/180 (64.44%), Query Frame = -1 Query: 235 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTS-DDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKE 771 NFA +AP +F+ +NN +AIST + +Q + + K A GI I+VDG D LAVY AV+AARE AI+ + P L+E L +R G H+ S DD T+YR+ E+E ++ P+ RFR ++E +G WSE+EE + K+++ +AI+ A++T K +T+L S +++ P NL EQ + KE Sbjct: 187 NFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRS-KELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKE 365
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODPA_BACSU (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus subtilis GN=pdhA PE=1 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 3.501e-32 Identity = 73/174 (41.95%), Postives = 110/174 (63.22%), Query Frame = -1 Query: 253 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTS-DDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQ 771 NFA +AP +F+ +NN +AIST + +Q ++ I K A GI ++VDG D LAVY A ARE AI+ + P L+E LT+R G H+ + DD TKYRT + W+ ++ P+ RFR ++E +G WSE+EE ++ K+++ QAI+ A+ K +T+L +Y+ P NL EQ Sbjct: 189 NFAGAYKAPAIFVVQNNRYAISTPVEKQSAAETIAQKAVAAGIVGVQVDGMDPLAVYAATAEARERAINGEGPTLIETLTFRYGPHTMAGDDPTKYRTKEIENEWE-QKDPLVRFRAFLENKGLWSEEEEAKVIEDAKEEIKQAIKKADAEPKQKVTDLMKIMYEKMPHNLEEQ 361
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODPA_BACCE (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus cereus GN=pdhA PE=1 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 7.799e-32 Identity = 73/180 (40.56%), Postives = 110/180 (61.11%), Query Frame = -1 Query: 235 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHS-TSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKE 771 NFA +AP +F+ +NN +AIST + +Q + + K A GI I+VDG D LAVY A ARE A++ + P L+E LT+R G H+ DD T+YRT D W+ ++ P+ RFR ++E +G WS++ E ++ K+ + QAI A++ K +T+L +Y+ P NLAEQ + KE Sbjct: 189 NFAGAFKAPAIFVVQNNRYAISTPVEKQSAAKTVAQKAVAAGIYGIQVDGMDPLAVYAATAFARERAVNGEGPTLIETLTFRYGPHTMAGDDPTRYRTKDIENEWE-QKDPIVRFRAFLENKGLWSQEVEEKVIEEAKEDIKQAIAKADQAPKQKVTDLMEIMYEKMPYNLAEQYEIYKE 367
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODBA_THET2 (2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1757 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.622e-31 Identity = 72/179 (40.22%), Postives = 106/179 (59.22%), Query Frame = -1 Query: 235 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKE 771 NFAAV AP VF+C NN +AIS + Q S I K A+GI VDG D LA Y V+ A E A + P LVE YR G HS++DD ++YR +E+ +W+ ++ P+ RFR ++E +G W+E+ E ++R I+ +L + ++ AE+ +F+DV+ P +L QE LKE Sbjct: 188 NFAAVQGAPAVFVCENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWR-KKDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEEAGPVPPEWMFADVFAEKPWHLLRQEALLKE 365
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODBA_THET8 (2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0229 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.533e-30 Identity = 72/179 (40.22%), Postives = 104/179 (58.10%), Query Frame = -1 Query: 235 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKE 771 NFAAV AP VFI NN +AIS + Q S I K A+GI VDG D LA Y V+ A E A + P LVE YR G HS++DD ++YR +E+ +W+ ++ P+ RFR ++E +G W+E+ E ++R I+ +L + ++ AE+ +F DV+ P +L QE LKE Sbjct: 188 NFAAVQGAPAVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWR-KKDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEEAGPVPPEWMFEDVFAEKPWHLLRQEALLKE 365 The following BLAST results are available for this feature:
BLAST of CN186385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186385 ID=CN186385; Name=CN186385; organism=Citrus sinensis; type=EST; length=771bpback to top |