CN186385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODPA_RAT (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus GN=Pdha1 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16 Identity = 52/167 (31.14%), Postives = 82/167 (49.10%), Query Frame = -1 Query: 271 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPP 771 N AA+ + P +FIC NN + + T++ S +G I +RVDG D L V A + A S K P+L+E TYR HS SD YRT +EI+ +++ P+ ++ + S +E E+ ++K++ A Q A +P + EL +Y P Sbjct: 209 NMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDP 373
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODPA_PORPU (Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra purpurea GN=pdhA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16 Identity = 53/158 (33.54%), Postives = 80/158 (50.63%), Query Frame = -1 Query: 298 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITEL 771 N A + + P++F+ NN WAI I K A+G+ I VDG D LAV + A E A + P L+EALTYR HS +D + R+ E E W R P+ + + + S E +++SS+K L Q+++ A + +P I+EL Sbjct: 181 NMAVLWKLPIIFVVENNQWAIGMAHHRSSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQVAEKAVERARQGQGPTLIEALTYRFRGHSLADPD-ELRSRQEKEAW-VARDPIKKLKKHILDNQIASSDELNDIQSSVKIDLEQSVEFAMSSPEPNISEL 336
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODPA_PONAB (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Pongo abelii GN=PDHA1 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16 Identity = 52/167 (31.14%), Postives = 82/167 (49.10%), Query Frame = -1 Query: 271 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPP 771 N AA+ + P +FIC NN + + T++ S +G I +RVDG D L V A + A S K P+L+E TYR HS SD YRT +EI+ +++ P+ ++ + S +E E+ ++K++ A Q A +P + EL +Y P Sbjct: 209 NMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDP 373
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODPA_MOUSE (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Mus musculus GN=Pdha1 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16 Identity = 52/167 (31.14%), Postives = 82/167 (49.10%), Query Frame = -1 Query: 271 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPP 771 N AA+ + P +FIC NN + + T++ S +G I +RVDG D L V A + A S K P+L+E TYR HS SD YRT +EI+ +++ P+ ++ + S +E E+ ++K++ A Q A +P + EL +Y P Sbjct: 209 NMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDP 373
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODPA_MACFA (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Macaca fascicularis GN=PDHA1 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16 Identity = 52/167 (31.14%), Postives = 82/167 (49.10%), Query Frame = -1 Query: 271 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPP 771 N AA+ + P +FIC NN + + T++ S +G I +RVDG D L V A + A S K P+L+E TYR HS SD YRT +EI+ +++ P+ ++ + S +E E+ ++K++ A Q A +P + EL +Y P Sbjct: 209 NMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDP 373
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODPA_KLULA (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Kluyveromyces lactis GN=PDA1 PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16 Identity = 55/181 (30.39%), Postives = 92/181 (50.83%), Query Frame = -1 Query: 235 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKP--AITELFSDVYDVPPSNLAEQEKQLKE 771 N A + P VF C NN + + T + +G+ I ++V+G D LAVY A + A++ +S P+++E TYR G HS SD T YRT DEI++ +++ P+ + + G +E E + +K + + +++A+ P ++ LF DVY VP S +L+E Sbjct: 221 NMAKLWNLPAVFCCENNKYGMGTAAARSSAMTEYFKRGQY--IPGLKVNGMDILAVYQASKFAKDWTVSGNGPIVLEYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLLELGIATEDEIKAYDKAARKYVDEQVELADAAPAPEAKMSILFEDVY-VPGSETPTLRGRLQE 398
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODPA_HUMAN (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Homo sapiens GN=PDHA1 PE=1 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16 Identity = 52/167 (31.14%), Postives = 82/167 (49.10%), Query Frame = -1 Query: 271 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPP 771 N AA+ + P +FIC NN + + T++ S +G I +RVDG D L V A + A S K P+L+E TYR HS SD YRT +EI+ +++ P+ ++ + S +E E+ ++K++ A Q A +P + EL +Y P Sbjct: 209 NMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDP 373
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODPA_SOLTU (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Solanum tuberosum PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.579e-16 Identity = 53/163 (32.52%), Postives = 86/163 (52.76%), Query Frame = -1 Query: 283 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVY 771 N AA+ + P + +C NN + + T +S +G + +RVDG D AV A A++ A+ + P+++E TYR HS SD + YRT DEI + ER PV R R+ + +E E ++ +K + +AI A+++ P +ELF++VY Sbjct: 211 NMAALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDY--VPGLRVDGMDVFAVKQACTFAKQHAL-KNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPVERIRSLILAHNIATEAELKDIEKENRKVVDEAIAKAKESPMPDPSELFTNVY 370
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODPA_RICPR (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia prowazekii GN=pdhA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.062e-16 Identity = 47/163 (28.83%), Postives = 89/163 (54.60%), Query Frame = -1 Query: 283 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVY 771 N A++ P+V+I NN +++ T+++ + KG ++GIR ++DG D +Y + E PV++E TYR HS SD + KYR+ +E+E +K ER + R R + + +E + + S+++ + A++ +E + PA EL++++Y Sbjct: 165 NMASLWGLPIVYIIENNEYSMGTSVARSTFMCDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHSMSDPA-KYRSKEEVEKYK-ERDTLVRIREIILDNKYATEADLKAIEQSVREIIKVAVEFSENSPLPAEDELYTEIY 325
BLAST of CN186385 vs. ExPASy Swiss-Prot
Match: ODPA_PIG (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial (Fragment) OS=Sus scrofa GN=PDHA1 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.062e-16 Identity = 55/179 (30.73%), Postives = 88/179 (49.16%), Query Frame = -1 Query: 238 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVY-DVPPSNLAEQEKQLK 771 N AA+ + P VFIC NN + + T++ S +G I +RVDG D L V A + A S K P+L+E TYR HS SD YRT +EI+ +++ P+ ++ + S +E E+ ++K++ A Q A +P + EL +Y + PP + + +K Sbjct: 208 NMAALWKLPCVFICENNRYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYCNDPPFEVRGANQWIK 384 The following BLAST results are available for this feature:
BLAST of CN186385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186385 ID=CN186385; Name=CN186385; organism=Citrus sinensis; type=EST; length=771bpback to top |