CN186382

Overview
NameCN186382
Unique NameCN186382
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_THET2 (Chaperone protein dnaJ OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13
Identity = 50/116 (43.10%), Postives = 68/116 (58.62%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPD--GGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYDAG-LYDPXXXXXXGFSDFVQEMLSLMAEARK---EDKSYSVE-ELQTM 398
            YY++LGVS  +S EEI++AYR+LA+++HPD   G K      +A+ +F+EI EAY+VLSD +KR  YD G L  P       F  F QE+  +    R    ED    VE ELQ +
Sbjct:    4 YYAILGVSREASQEEIKKAYRRLALKYHPDRNPGDK------EAEERFKEINEAYAVLSDPKKRAAYDRGHLEAPEYRPEDLFDLFFQEVFGVRGHRRPPRGEDLEAEVEVELQDL 113          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ1_THET8 (Chaperone protein dnaJ 1 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dnaJ1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13
Identity = 50/116 (43.10%), Postives = 68/116 (58.62%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPD--GGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYDAG-LYDPXXXXXXGFSDFVQEMLSLMAEARK---EDKSYSVE-ELQTM 398
            YY++LGVS  +S EEI++AYR+LA+++HPD   G K      +A+ +F+EI EAY+VLSD +KR  YD G L  P       F  F QE+  +    R    ED    VE ELQ +
Sbjct:    4 YYAILGVSREASQEEIKKAYRRLALKYHPDRNPGDK------EAEERFKEINEAYAVLSDPKKRAAYDRGHLEAPEYRPEDLFDLFFQEVFGVRGHRRPPRGEDLEAEVEVELQDL 113          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNJ6B_XENLA (DnaJ homolog subfamily B member 6-B OS=Xenopus laevis GN=dnajb6-B PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.213e-12
Identity = 34/66 (51.52%), Postives = 49/66 (74.24%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV  +SS ++I++AYR+LA++WHPD   K P    +A+ +F+E+ EAY VLSD +KR +YD
Sbjct:    4 YYDVLGVQRNSSPDDIKKAYRRLALKWHPD---KNPDNKEEAERRFKEVAEAYEVLSDSKKRDIYD 66          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNJ6A_XENLA (DnaJ homolog subfamily B member 6-A OS=Xenopus laevis GN=dnajb6-A PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.213e-12
Identity = 33/66 (50.00%), Postives = 49/66 (74.24%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV  ++S ++I++AYR+LA++WHPD   K P    +A+ +F+E+ EAY VLSD +KR +YD
Sbjct:    4 YYEVLGVQRNASADDIKKAYRRLALKWHPD---KNPDNKDEAERRFKEVAEAYEVLSDSKKRDIYD 66          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_THEM4 (Chaperone protein dnaJ OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.213e-12
Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY +LGVS +++ EEIR+AY+KL  +WHPD   +   L   A+ KF+EIQEAY VLSD  KR +YD
Sbjct:    6 YYEILGVSRNATQEEIRQAYKKLIKKWHPDRNYENKKL---AEEKFKEIQEAYEVLSDPEKRAMYD 68          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNJB7_MOUSE (DnaJ homolog subfamily B member 7 OS=Mus musculus GN=Dnajb7 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV  ++S E+I+RAYRK+A++WHPD   K P    +A+ KF+E+ EAY VLS+  KR +YD
Sbjct:    4 YYEVLGVQRYASPEDIKRAYRKVALKWHPD---KNPENKEEAERKFKEVAEAYEVLSNVEKRDIYD 66          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_THEAB (Chaperone protein dnaJ OS=Thermosipho africanus (strain TCF52B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 40/87 (45.98%), Postives = 52/87 (59.77%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD----AGLYDPXXXXXXGFSDF 320
            YY +LGVS ++S EEIR+AY++L  +WHPD   +      +A+ KF+EIQEAY VLSD  KR +YD     G   P      GF  F
Sbjct:    6 YYEILGVSRNASQEEIRQAYKQLIKKWHPDRNHQNRK---EAEEKFKEIQEAYEVLSDPEKRAMYDRFGYVGDVPPNAGSGGGFGGF 89          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_NITSB (Chaperone protein dnaJ OS=Nitratiruptor sp. (strain SB155-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 42/90 (46.67%), Postives = 54/90 (60.00%), Query Frame = 3
Query:   60 VQPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYDAGLYDPXXXXXXGFSDFVQE 329
            V   YY +L V  ++S EEI++AYRKLA+++HPD     P    +A+ KF+ I EAY VLSDE KR LYD   Y        GFS F Q+
Sbjct:    2 VDIDYYELLEVDRNASFEEIKKAYRKLALKYHPDRNPDNP----EAEEKFKLINEAYQVLSDEEKRALYDQ--YGKAGLENQGFSGFNQK 85          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNJC7_DICDI (DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.702e-12
Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 3
Query:   51 QRKVQPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTP-SLLGKAKVKFQEIQEAYSVLSDERKRTLYDAG 275
            ++ ++  YY +LGVS  +   EI++AYRKLA+Q+HPD   + P     +A+  F++I EAYSVLSDE+K+  YD G
Sbjct:  355 KKSLRKDYYKILGVSKEAGETEIKKAYRKLALQYHPDKNNQLPEEEKAQAEKMFKDIGEAYSVLSDEKKKRQYDMG 430          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNJB3_MOUSE (DnaJ homolog subfamily B member 3 OS=Mus musculus GN=Dnajb3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.702e-12
Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV   +S E IR+AYRKLA++WHPD   K P    +A+ +F+++ +AY VLSD RKR +YD
Sbjct:    4 YYEVLGVPRQASAEAIRKAYRKLALKWHPD---KNPEHKEEAERRFKQVAQAYEVLSDVRKREVYD 66          
The following BLAST results are available for this feature:
BLAST of CN186382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
DNAJ_THET29.286e-1343.10Chaperone protein dnaJ OS=Thermus thermophilus (st... [more]
DNAJ1_THET89.286e-1343.10Chaperone protein dnaJ 1 OS=Thermus thermophilus (... [more]
DNJ6B_XENLA1.213e-1251.52DnaJ homolog subfamily B member 6-B OS=Xenopus lae... [more]
DNJ6A_XENLA1.213e-1250.00DnaJ homolog subfamily B member 6-A OS=Xenopus lae... [more]
DNAJ_THEM41.213e-1254.55Chaperone protein dnaJ OS=Thermosipho melanesiensi... [more]
DNJB7_MOUSE2.069e-1253.03DnaJ homolog subfamily B member 7 OS=Mus musculus ... [more]
DNAJ_THEAB2.069e-1245.98Chaperone protein dnaJ OS=Thermosipho africanus (s... [more]
DNAJ_NITSB2.069e-1246.67Chaperone protein dnaJ OS=Nitratiruptor sp. (strai... [more]
DNJC7_DICDI2.702e-1246.05DnaJ homolog subfamily C member 7 homolog OS=Dicty... [more]
DNJB3_MOUSE2.702e-1253.03DnaJ homolog subfamily B member 3 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002N01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002N01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186382 ID=CN186382; Name=CN186382; organism=Citrus sinensis; type=EST; length=718bp
TTTTGATGTCCCATTCTGAACACAAATTATGAAAGATGGAGGCAGAGAGT
CAAAGGAAAGTGCAGCCATCTTATTACAGCGTTCTGGGTGTGAGTGTGCA
CTCTTCTGTTGAAGAAATAAGGCGCGCTTATCGCAAGCTTGCTATGCAAT
GGCATCCTGATGGGGGGACAAAGACTCCATCTTTGTTGGGTAAAGCCAAG
GTTAAATTCCAGGAAATTCAAGAAGCCTATTCTGTTTTGTCAGATGAGAG
GAAGAGGACACTATATGATGCAGGGTTATATGACCCTGAAGAAGAAGAGG
AAGAGGGATTTTCAGATTTTGTGCAAGAAATGCTGTCTCTAATGGCTGAA
GCCAGGAAAGAGGACAAAAGCTACAGCGTGGAGGAGCTGCAAACAATGTT
CATGGAAATGGCACAAGAATTTGAGCAGTCCTCGTGGTTCTGCGGATACC
CAGTTGCTGATGATTCCTGCTCCTTGGAGAGTACACAGTGGAATACGAAT
TCAATAGACAATAATAGAAACGCACAATTTGGTGCTTTTCCAGGGTGGCA
GTTCTATGGAGCAAGTGGTTTTTGCAGATAAAAGAATCCATTTGGATTCA
AACAGTGGATGCAAGATTTGAACATGAAAACGAGCAGTGAGCCTCTGATT
TTTGCTCTGATTATTTTTGGTGTGGAGACCATCACATTTTGTGGGAAACG
TCTTTGCCTCTGATGTCC
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