CN186382

Overview
NameCN186382
Unique NameCN186382
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOTN (Chaperone protein dnaJ OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.027e-11
Identity = 41/81 (50.62%), Postives = 52/81 (64.20%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYDA-GLYDPXXXXXXGF 311
            YY VLGVS +++ +EI++AYRKL+ Q+HPD   K P     A  KF+EI+EAY VLSD+ KR  YD  G  DP      GF
Sbjct:    6 YYEVLGVSKNATKDEIKKAYRKLSKQYHPD-INKAPD----AAEKFKEIKEAYEVLSDDEKRARYDRFGHADPNEAFGGGF 81          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNJB7_HUMAN (DnaJ homolog subfamily B member 7 OS=Homo sapiens GN=DNAJB7 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11
Identity = 32/66 (48.48%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLG+  ++S E+I++AY K+A++WHPD   K P    +A+ KF+E+ EAY VLS++ KR +YD
Sbjct:    4 YYEVLGLQRYASPEDIKKAYHKVALKWHPD---KNPENKEEAERKFKEVAEAYEVLSNDEKRDIYD 66          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_METFK (Chaperone protein dnaJ OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11
Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV+  ++ EEI++AYRKLAM++HPD     P    KA+  F+E +EAY VLSD++KR  YD
Sbjct:    6 YYEVLGVNRDATDEEIKKAYRKLAMKYHPDRNPDNP----KAEEHFKEAKEAYEVLSDDQKRAAYD 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DJB10_MOUSE (DnaJ homolog subfamily B member 10 OS=Mus musculus GN=Dnajb10 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.751e-11
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 3
Query:   69 SYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            SYY +L V   +S ++I++AYRK A+QWHPD   K P     A+ KF+E+ EAY VLSD+ KR +YD
Sbjct:    3 SYYEILDVPRSASPDDIKKAYRKKALQWHPD---KNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYD 66          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNJB2_HUMAN (DnaJ homolog subfamily B member 2 OS=Homo sapiens GN=DNAJB2 PE=2 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 3
Query:   69 SYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            SYY +L V   +S ++I++AYR+ A+QWHPD   K P     A+ KF+E+ EAY VLSD+ KR +YD
Sbjct:    3 SYYEILDVPRSASADDIKKAYRRKALQWHPD---KNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYD 66          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_HYDTH (Chaperone protein dnaJ OS=Hydrogenobacter thermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11
Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYDAGLYDPXXXXXXGFSDFVQEML 335
            YY +LGVS  ++ EEI++AYR+LA ++HPD      S    A  KF+EI EAY +LSDE +R  YD  L          F +++Q+ L
Sbjct:    6 YYQILGVSKDATAEEIKKAYRRLAKEYHPD-----ISADENASEKFKEINEAYHILSDEERRKEYDRILKSGDEKSYRDFMEYIQDFL 88          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_HELPJ (Chaperone protein dnaJ OS=Helicobacter pylori J99 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11
Identity = 43/101 (42.57%), Postives = 60/101 (59.41%), Query Frame = 3
Query:   69 SYYSVLGVSVHSSVEEIRRAYRKLAMQWHPD--GGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD----AGLYDPXXXXXXGFSDFVQEMLSLMAEA 353
            SYY +L V  HS+ E I+++YRKLA+++HPD   G K      +A+ KF+ I EAY VL DE+KR LYD     GL +        FSDF +++ S   +A
Sbjct:    4 SYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDK------EAEEKFKLINEAYGVLGDEKKRALYDRYGKKGL-NQAGTSQSDFSDFFEDLGSFFEDA 97          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_ROSS1 (Chaperone protein dnaJ OS=Roseiflexus sp. (strain RS-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11
Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 3
Query:   60 VQPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            V+  YY VLGV  ++S +EI++A+R+LA Q+HPD   K P     A+ KF+EI EAY VLSD  KR++YD
Sbjct:    3 VKRDYYEVLGVQRNASQDEIKKAFRRLARQYHPD-VNKAPD----AEAKFKEINEAYEVLSDPEKRSMYD 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_ROSCS (Chaperone protein dnaJ OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11
Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 3
Query:   60 VQPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            V+  YY VLGV  ++S +EI++A+R+LA Q+HPD   K P     A+ KF+EI EAY VLSD  KR++YD
Sbjct:    3 VKRDYYEVLGVQRNASQDEIKKAFRRLARQYHPD-VNKAPD----AEAKFKEINEAYEVLSDPEKRSMYD 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATW (Chaperone protein dnaJ OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11
Identity = 37/71 (52.11%), Postives = 49/71 (69.01%), Query Frame = 3
Query:   63 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPD--GGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            Q  YY +L VS  +S  EI+RAYRKLAM++HPD   G K      +A++KF+EI EAY +LSD+ KR+ YD
Sbjct:    3 QKCYYEILNVSKTASGVEIKRAYRKLAMEYHPDRNPGDK------EAEIKFKEISEAYEILSDDSKRSRYD 67          
The following BLAST results are available for this feature:
BLAST of CN186382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
DNAJ_GEOTN1.027e-1150.62Chaperone protein dnaJ OS=Geobacillus thermodenitr... [more]
DNJB7_HUMAN1.341e-1148.48DnaJ homolog subfamily B member 7 OS=Homo sapiens ... [more]
DNAJ_METFK1.341e-1153.03Chaperone protein dnaJ OS=Methylobacillus flagella... [more]
DJB10_MOUSE1.751e-1150.75DnaJ homolog subfamily B member 10 OS=Mus musculus... [more]
DNJB2_HUMAN2.287e-1149.25DnaJ homolog subfamily B member 2 OS=Homo sapiens ... [more]
DNAJ_HYDTH2.287e-1142.05Chaperone protein dnaJ OS=Hydrogenobacter thermoph... [more]
DNAJ_HELPJ2.287e-1142.57Chaperone protein dnaJ OS=Helicobacter pylori J99 ... [more]
DNAJ_ROSS12.987e-1151.43Chaperone protein dnaJ OS=Roseiflexus sp. (strain ... [more]
DNAJ_ROSCS2.987e-1151.43Chaperone protein dnaJ OS=Roseiflexus castenholzii... [more]
DNAJ_FRATW2.987e-1152.11Chaperone protein dnaJ OS=Francisella tularensis s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002N01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002N01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186382 ID=CN186382; Name=CN186382; organism=Citrus sinensis; type=EST; length=718bp
TTTTGATGTCCCATTCTGAACACAAATTATGAAAGATGGAGGCAGAGAGT
CAAAGGAAAGTGCAGCCATCTTATTACAGCGTTCTGGGTGTGAGTGTGCA
CTCTTCTGTTGAAGAAATAAGGCGCGCTTATCGCAAGCTTGCTATGCAAT
GGCATCCTGATGGGGGGACAAAGACTCCATCTTTGTTGGGTAAAGCCAAG
GTTAAATTCCAGGAAATTCAAGAAGCCTATTCTGTTTTGTCAGATGAGAG
GAAGAGGACACTATATGATGCAGGGTTATATGACCCTGAAGAAGAAGAGG
AAGAGGGATTTTCAGATTTTGTGCAAGAAATGCTGTCTCTAATGGCTGAA
GCCAGGAAAGAGGACAAAAGCTACAGCGTGGAGGAGCTGCAAACAATGTT
CATGGAAATGGCACAAGAATTTGAGCAGTCCTCGTGGTTCTGCGGATACC
CAGTTGCTGATGATTCCTGCTCCTTGGAGAGTACACAGTGGAATACGAAT
TCAATAGACAATAATAGAAACGCACAATTTGGTGCTTTTCCAGGGTGGCA
GTTCTATGGAGCAAGTGGTTTTTGCAGATAAAAGAATCCATTTGGATTCA
AACAGTGGATGCAAGATTTGAACATGAAAACGAGCAGTGAGCCTCTGATT
TTTGCTCTGATTATTTTTGGTGTGGAGACCATCACATTTTGTGGGAAACG
TCTTTGCCTCTGATGTCC
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