CN186382

Overview
NameCN186382
Unique NameCN186382
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNJB3_HUMAN (DnaJ homolog subfamily B member 3 OS=Homo sapiens GN=DNAJB3 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.901e-11
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VL V   +S E I++AYRKLA++WHPD   K P    +A+ +F+++ EAY VLSD +KR +YD
Sbjct:    4 YYEVLDVPRQASSEAIKKAYRKLALKWHPD---KNPENKEEAERRFKQVAEAYEVLSDAKKRDIYD 66          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_THEVO (Chaperone protein dnaJ OS=Thermoplasma volcanium GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.901e-11
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY +LGV  ++S E+I++A+R+LA +WHPD     P    +A+ KF+EI EAY VLSD  KR +YD
Sbjct:    5 YYKILGVDRNASEEDIKKAFRELAKKWHPD---LHPDNKAEAEEKFKEISEAYEVLSDPEKRRIYD 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_FRAP2 (Chaperone protein dnaJ OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.901e-11
Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 3
Query:   63 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            Q  YY +L VS  +S  EI+RAYRKLAM++HPD          +A++KF+EI EAY +LSD+ KR+ YD
Sbjct:    3 QKCYYEILNVSKTASGVEIKRAYRKLAMKYHPDRNPDDK----EAEIKFKEISEAYEILSDDGKRSRYD 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLPN (Chaperone protein dnaJ OS=Chlamydia pneumoniae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.901e-11
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YYS+LG+S  +S EEI++AYRKLA+++HPD   K P     A+ +F+E+ EAY VLSD +KR  YD
Sbjct:    3 YYSILGISKTASAEEIKKAYRKLAVKYHPD---KNPG-DAAAEKRFKEVSEAYEVLSDPQKRDSYD 64          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCN (Chaperone protein dnaJ OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.901e-11
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGVS  +S +EI++AYR+LA ++HPD   +       A  KF+E+QEAY VLSDE+KR  YD
Sbjct:    6 YYEVLGVSKSASKDEIKKAYRRLAKKYHPDVSKEE-----NAVEKFKEVQEAYEVLSDEQKRAQYD 66          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_ACICJ (Chaperone protein dnaJ OS=Acidiphilium cryptum (strain JF-5) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.901e-11
Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY +LGVS  +S +E+++AYRKLAMQ+HPD      +    A+ KF++I EAY VL DE+KR  YD
Sbjct:    6 YYELLGVSRGASADELKKAYRKLAMQYHPDRNPGDAA----AEQKFKDINEAYDVLKDEQKRAAYD 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOKA (Chaperone protein dnaJ OS=Geobacillus kaustophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.095e-11
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYDA-GLYDP 287
            YY +LGVS +++ +EI++AYRKL+ Q+HPD   K P     A  KF+EI+EAY VLSD+ KR  YD  G  DP
Sbjct:    6 YYEILGVSKNATKDEIKKAYRKLSKQYHPD-VNKAPD----AAEKFKEIKEAYEVLSDDEKRARYDRFGHADP 73          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATU (Chaperone protein dnaJ OS=Francisella tularensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.095e-11
Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 3
Query:   63 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPD--GGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            Q  YY +L +S  +S  EI+RAYRKLAM++HPD   G K      +A++KF+EI EAY +LSD+ KR+ YD
Sbjct:    3 QKCYYEILNISKTASGVEIKRAYRKLAMKYHPDRNPGDK------EAEIKFKEISEAYEILSDDSKRSRYD 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATH (Chaperone protein dnaJ OS=Francisella tularensis subsp. holarctica (strain LVS) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.095e-11
Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 3
Query:   63 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPD--GGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            Q  YY +L +S  +S  EI+RAYRKLAM++HPD   G K      +A++KF+EI EAY +LSD+ KR+ YD
Sbjct:    3 QKCYYEILNISKTASGVEIKRAYRKLAMKYHPDRNPGDK------EAEIKFKEISEAYEILSDDSKRSRYD 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPE (Chaperone protein dnaJ OS=Bordetella pertussis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.095e-11
Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV+ ++S E++++AYRKLAM++HPD    +     +A+ KF+E +EAY VL DE+KR  YD
Sbjct:    6 YYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSK----EAEEKFKEAKEAYEVLGDEQKRAAYD 67          
The following BLAST results are available for this feature:
BLAST of CN186382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
DNJB3_HUMAN3.901e-1150.00DnaJ homolog subfamily B member 3 OS=Homo sapiens ... [more]
DNAJ_THEVO3.901e-1150.00Chaperone protein dnaJ OS=Thermoplasma volcanium G... [more]
DNAJ_FRAP23.901e-1150.72Chaperone protein dnaJ OS=Francisella philomiragia... [more]
DNAJ_CHLPN3.901e-1153.03Chaperone protein dnaJ OS=Chlamydia pneumoniae GN=... [more]
DNAJ_BACCN3.901e-1153.03Chaperone protein dnaJ OS=Bacillus cereus subsp. c... [more]
DNAJ_ACICJ3.901e-1151.52Chaperone protein dnaJ OS=Acidiphilium cryptum (st... [more]
DNAJ_GEOKA5.095e-1152.05Chaperone protein dnaJ OS=Geobacillus kaustophilus... [more]
DNAJ_FRATU5.095e-1150.70Chaperone protein dnaJ OS=Francisella tularensis G... [more]
DNAJ_FRATH5.095e-1150.70Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_BORPE5.095e-1150.00Chaperone protein dnaJ OS=Bordetella pertussis GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002N01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002N01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186382 ID=CN186382; Name=CN186382; organism=Citrus sinensis; type=EST; length=718bp
TTTTGATGTCCCATTCTGAACACAAATTATGAAAGATGGAGGCAGAGAGT
CAAAGGAAAGTGCAGCCATCTTATTACAGCGTTCTGGGTGTGAGTGTGCA
CTCTTCTGTTGAAGAAATAAGGCGCGCTTATCGCAAGCTTGCTATGCAAT
GGCATCCTGATGGGGGGACAAAGACTCCATCTTTGTTGGGTAAAGCCAAG
GTTAAATTCCAGGAAATTCAAGAAGCCTATTCTGTTTTGTCAGATGAGAG
GAAGAGGACACTATATGATGCAGGGTTATATGACCCTGAAGAAGAAGAGG
AAGAGGGATTTTCAGATTTTGTGCAAGAAATGCTGTCTCTAATGGCTGAA
GCCAGGAAAGAGGACAAAAGCTACAGCGTGGAGGAGCTGCAAACAATGTT
CATGGAAATGGCACAAGAATTTGAGCAGTCCTCGTGGTTCTGCGGATACC
CAGTTGCTGATGATTCCTGCTCCTTGGAGAGTACACAGTGGAATACGAAT
TCAATAGACAATAATAGAAACGCACAATTTGGTGCTTTTCCAGGGTGGCA
GTTCTATGGAGCAAGTGGTTTTTGCAGATAAAAGAATCCATTTGGATTCA
AACAGTGGATGCAAGATTTGAACATGAAAACGAGCAGTGAGCCTCTGATT
TTTGCTCTGATTATTTTTGGTGTGGAGACCATCACATTTTGTGGGAAACG
TCTTTGCCTCTGATGTCC
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