CN186382

Overview
NameCN186382
Unique NameCN186382
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPA (Chaperone protein dnaJ OS=Bordetella parapertussis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.095e-11
Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV+ ++S E++++AYRKLAM++HPD    +     +A+ KF+E +EAY VL DE+KR  YD
Sbjct:    6 YYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSK----EAEEKFKEAKEAYEVLGDEQKRAAYD 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_BORBR (Chaperone protein dnaJ OS=Bordetella bronchiseptica GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.095e-11
Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV+ ++S E++++AYRKLAM++HPD    +     +A+ KF+E +EAY VL DE+KR  YD
Sbjct:    6 YYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSK----EAEEKFKEAKEAYEVLGDEQKRAAYD 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11
Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 3
Query:   63 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYDAG 275
            + +YY VLGV  +++ EE+++AYRKLA+++HPD   K P+       KF++I +AY VLSD +KR LYD G
Sbjct:    4 ETTYYDVLGVKPNATQEELKKAYRKLALKYHPD---KNPN----EGEKFKQISQAYEVLSDAKKRELYDKG 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11
Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 3
Query:   63 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYDAG 275
            + +YY VLGV  +++ EE+++AYRKLA+++HPD   K P+       KF++I +AY VLSD +KR LYD G
Sbjct:    4 ETTYYDVLGVKPNATQEELKKAYRKLALKYHPD---KNPN----EGEKFKQISQAYEVLSDAKKRELYDKG 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNJA1_BOVIN (DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11
Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 3
Query:   63 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYDAG 275
            + +YY VLGV  +++ EE+++AYRKLA+++HPD   K P+       KF++I +AY VLSD +KR LYD G
Sbjct:    4 ETTYYDVLGVKPNATQEELKKAYRKLALKYHPD---KNPN----EGEKFKQISQAYEVLSDAKKRELYDKG 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_THEAC (Chaperone protein dnaJ OS=Thermoplasma acidophilum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11
Identity = 33/66 (50.00%), Postives = 47/66 (71.21%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY +LGV  +++ EEI++A+R+LA +WHPD     P    +A+ KF+EI EAY VLSD +KR +YD
Sbjct:    5 YYKILGVDRNATDEEIKKAFRELAKKWHPD---LHPENKQEAEEKFKEISEAYEVLSDPQKRRMYD 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_NITOC (Chaperone protein dnaJ OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY  LGV+ ++S  EI++AYR+LAM++HPD      +    A+  F+EIQEAY VLSD RKRT YD
Sbjct:    6 YYEALGVARNASDAEIKKAYRRLAMRYHPDRNPDDKA----AEEHFKEIQEAYDVLSDARKRTAYD 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_DICNV (Chaperone protein dnaJ OS=Dichelobacter nodosus (strain VCS1703A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11
Identity = 32/70 (45.71%), Postives = 50/70 (71.43%), Query Frame = 3
Query:   75 YSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYDAGLYD 284
            Y++LGV   ++ +EI++AYRKL+M+WHPD   + P+   +A+ KF+EI +AY +LSD +KR  YD   +D
Sbjct:    7 YAILGVCRTANQDEIKKAYRKLSMKWHPD---RNPNNKEEAEEKFKEINKAYEILSDSQKRASYDRFGFD 73          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOD6 (Chaperone protein dnaJ OS=Clostridium difficile (strain 630) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11
Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPD--GGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLG+S  +  +EI++AYRKLAM++HPD   G K      +A+ KF+EI EAY VLSD+ KR  YD
Sbjct:    7 YYEVLGISKGAEAQEIKKAYRKLAMKYHPDRNPGDK------EAEEKFKEINEAYEVLSDDTKRKTYD 68          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLFF (Chaperone protein dnaJ OS=Chlamydophila felis (strain Fe/C-56) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11
Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGVS  +S EEI++AYRKLA+++HPD   K P    +A+ +F+E+ EAY VLSD +KR  YD
Sbjct:    3 YYDVLGVSKTASPEEIKKAYRKLAVKYHPD---KNPG-DAEAEKRFKEVSEAYEVLSDAQKRESYD 64          
The following BLAST results are available for this feature:
BLAST of CN186382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
DNAJ_BORPA5.095e-1150.00Chaperone protein dnaJ OS=Bordetella parapertussis... [more]
DNAJ_BORBR5.095e-1150.00Chaperone protein dnaJ OS=Bordetella bronchiseptic... [more]
DNJA1_PONAB6.655e-1147.89DnaJ homolog subfamily A member 1 OS=Pongo abelii ... [more]
DNJA1_HUMAN6.655e-1147.89DnaJ homolog subfamily A member 1 OS=Homo sapiens ... [more]
DNJA1_BOVIN6.655e-1147.89DnaJ homolog subfamily A member 1 OS=Bos taurus GN... [more]
DNAJ_THEAC6.655e-1150.00Chaperone protein dnaJ OS=Thermoplasma acidophilum... [more]
DNAJ_NITOC6.655e-1153.03Chaperone protein dnaJ OS=Nitrosococcus oceani (st... [more]
DNAJ_DICNV6.655e-1145.71Chaperone protein dnaJ OS=Dichelobacter nodosus (s... [more]
DNAJ_CLOD66.655e-1152.94Chaperone protein dnaJ OS=Clostridium difficile (s... [more]
DNAJ_CHLFF6.655e-1154.55Chaperone protein dnaJ OS=Chlamydophila felis (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002N01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002N01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186382 ID=CN186382; Name=CN186382; organism=Citrus sinensis; type=EST; length=718bp
TTTTGATGTCCCATTCTGAACACAAATTATGAAAGATGGAGGCAGAGAGT
CAAAGGAAAGTGCAGCCATCTTATTACAGCGTTCTGGGTGTGAGTGTGCA
CTCTTCTGTTGAAGAAATAAGGCGCGCTTATCGCAAGCTTGCTATGCAAT
GGCATCCTGATGGGGGGACAAAGACTCCATCTTTGTTGGGTAAAGCCAAG
GTTAAATTCCAGGAAATTCAAGAAGCCTATTCTGTTTTGTCAGATGAGAG
GAAGAGGACACTATATGATGCAGGGTTATATGACCCTGAAGAAGAAGAGG
AAGAGGGATTTTCAGATTTTGTGCAAGAAATGCTGTCTCTAATGGCTGAA
GCCAGGAAAGAGGACAAAAGCTACAGCGTGGAGGAGCTGCAAACAATGTT
CATGGAAATGGCACAAGAATTTGAGCAGTCCTCGTGGTTCTGCGGATACC
CAGTTGCTGATGATTCCTGCTCCTTGGAGAGTACACAGTGGAATACGAAT
TCAATAGACAATAATAGAAACGCACAATTTGGTGCTTTTCCAGGGTGGCA
GTTCTATGGAGCAAGTGGTTTTTGCAGATAAAAGAATCCATTTGGATTCA
AACAGTGGATGCAAGATTTGAACATGAAAACGAGCAGTGAGCCTCTGATT
TTTGCTCTGATTATTTTTGGTGTGGAGACCATCACATTTTGTGGGAAACG
TCTTTGCCTCTGATGTCC
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