CN186382

Overview
NameCN186382
Unique NameCN186382
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_BACST (Chaperone protein dnaJ OS=Bacillus stearothermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11
Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYDA-GLYDP 287
            YY +LGVS +++ EEI++AYRKL+ ++HPD   K P     A  KF+EI+EAY VLSD++KR  YD  G  DP
Sbjct:    6 YYEILGVSKNATKEEIKKAYRKLSKKYHPD-VNKEPD----AAEKFKEIKEAYEVLSDDQKRAHYDQFGQADP 73          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ1_CERAE (DnaJ homolog subfamily A member 1 OS=Cercopithecus aethiops GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11
Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 3
Query:   63 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYDAG 275
            + +YY VLGV  +++ EE+++AYRKLA+++HPD   K P+       KF++I +AY VLSD +KR LYD G
Sbjct:    4 ETTYYDVLGVKPNATQEELKKAYRKLALKYHPD---KNPN----EGEKFKQISQAYEVLSDAKKRELYDKG 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_RHOCS (Chaperone protein dnaJ OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV   +S +++++AYRKLAMQ+HPD      +    A+ KF+EI EAY VL D++KR  YD
Sbjct:    6 YYEVLGVQKGASADDLKKAYRKLAMQYHPDRNQGDKA----AEQKFKEISEAYDVLKDDQKRAAYD 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_METAC (Chaperone protein dnaJ OS=Methanosarcina acetivorans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY +LG+   +SVE+I++ YRKLA+Q+HPD   K P     A+ KF+EI EAY+VLSD  KR  YD
Sbjct:    7 YYEILGLPKDASVEDIKKTYRKLALQYHPD-RNKDPG----AEDKFKEISEAYAVLSDTEKRAQYD 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_LISW6 (Chaperone protein dnaJ OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYDA-GLYDP 287
            YY VLG+S  +S +EI++AYRKL+ Q+HPD   +       A  KF+EI EAY VLSD +KR  YD  G  DP
Sbjct:    6 YYEVLGISKSASADEIKKAYRKLSKQYHPDINKE-----AGADEKFKEISEAYEVLSDSQKRAQYDQYGHVDP 73          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_DESVV (Chaperone protein dnaJ OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 35/69 (50.72%), Postives = 45/69 (65.22%), Query Frame = 3
Query:   63 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            Q  YY VLGV+  +S ++I+RAYRKLA+Q+HPD     P    +A+ KF+E  EAY VL D  KR  YD
Sbjct:    3 QRDYYEVLGVARDASEDDIKRAYRKLALQYHPDRNPDDP----EAEQKFKEAAEAYDVLRDGEKRARYD 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_DESVH (Chaperone protein dnaJ OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 35/69 (50.72%), Postives = 45/69 (65.22%), Query Frame = 3
Query:   63 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            Q  YY VLGV+  +S ++I+RAYRKLA+Q+HPD     P    +A+ KF+E  EAY VL D  KR  YD
Sbjct:    3 QRDYYEVLGVARDASEDDIKRAYRKLALQYHPDRNPDDP----EAEQKFKEAAEAYDVLRDGEKRARYD 67          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_DESDG (Chaperone protein dnaJ OS=Desulfovibrio desulfuricans (strain G20) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 40/88 (45.45%), Postives = 50/88 (56.82%), Query Frame = 3
Query:   63 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD----AGLYDPXXXXXXGFS 314
            Q  YY VLGVS  ++ +EI+RAYRK AM++HPD     P    +A+ KF+E  EAY VL D  KR  YD    AG+         GFS
Sbjct:    3 QRDYYEVLGVSRDAADDEIKRAYRKKAMEFHPDRNPDNP----EAEAKFKEAAEAYDVLRDAEKRARYDRFGHAGVNGNGYGGGGGFS 86          
BLAST of CN186382 vs. ExPASy Swiss-Prot
Match: DNAJ_CARHZ (Chaperone protein dnaJ OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 3
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDGGTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY +LGV+ +++ EEI++AYRKLA ++HPD     P+    A  KF+EI EAY VLSD  KR  YD
Sbjct:    5 YYEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPN----AAEKFKEINEAYEVLSDPEKRARYD 66          
The following BLAST results are available for this feature:
BLAST of CN186382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
DNAJ_BACST6.655e-1152.05Chaperone protein dnaJ OS=Bacillus stearothermophi... [more]
DNAJ1_CERAE6.655e-1147.89DnaJ homolog subfamily A member 1 OS=Cercopithecus... [more]
DNAJ_RHOCS8.691e-1150.00Chaperone protein dnaJ OS=Rhodospirillum centenum ... [more]
DNAJ_METAC8.691e-1153.03Chaperone protein dnaJ OS=Methanosarcina acetivora... [more]
DNAJ_LISW68.691e-1150.68Chaperone protein dnaJ OS=Listeria welshimeri sero... [more]
DNAJ_DESVV8.691e-1150.72Chaperone protein dnaJ OS=Desulfovibrio vulgaris s... [more]
DNAJ_DESVH8.691e-1150.72Chaperone protein dnaJ OS=Desulfovibrio vulgaris (... [more]
DNAJ_DESDG8.691e-1145.45Chaperone protein dnaJ OS=Desulfovibrio desulfuric... [more]
DNAJ_CARHZ8.691e-1151.52Chaperone protein dnaJ OS=Carboxydothermus hydroge... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002N01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002N01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186382 ID=CN186382; Name=CN186382; organism=Citrus sinensis; type=EST; length=718bp
TTTTGATGTCCCATTCTGAACACAAATTATGAAAGATGGAGGCAGAGAGT
CAAAGGAAAGTGCAGCCATCTTATTACAGCGTTCTGGGTGTGAGTGTGCA
CTCTTCTGTTGAAGAAATAAGGCGCGCTTATCGCAAGCTTGCTATGCAAT
GGCATCCTGATGGGGGGACAAAGACTCCATCTTTGTTGGGTAAAGCCAAG
GTTAAATTCCAGGAAATTCAAGAAGCCTATTCTGTTTTGTCAGATGAGAG
GAAGAGGACACTATATGATGCAGGGTTATATGACCCTGAAGAAGAAGAGG
AAGAGGGATTTTCAGATTTTGTGCAAGAAATGCTGTCTCTAATGGCTGAA
GCCAGGAAAGAGGACAAAAGCTACAGCGTGGAGGAGCTGCAAACAATGTT
CATGGAAATGGCACAAGAATTTGAGCAGTCCTCGTGGTTCTGCGGATACC
CAGTTGCTGATGATTCCTGCTCCTTGGAGAGTACACAGTGGAATACGAAT
TCAATAGACAATAATAGAAACGCACAATTTGGTGCTTTTCCAGGGTGGCA
GTTCTATGGAGCAAGTGGTTTTTGCAGATAAAAGAATCCATTTGGATTCA
AACAGTGGATGCAAGATTTGAACATGAAAACGAGCAGTGAGCCTCTGATT
TTTGCTCTGATTATTTTTGGTGTGGAGACCATCACATTTTGTGGGAAACG
TCTTTGCCTCTGATGTCC
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