CN186371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: DNM1L_RAT (Dynamin-1-like protein OS=Rattus norvegicus GN=Dnm1l PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 8.030e-39 Identity = 94/222 (42.34%), Postives = 126/222 (56.76%), Query Frame = 3 Query: 153 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL-HKLEEGSR-------------------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 ME LI ++NK+Q +G A + LP I LES+VG+D LPRG+G+VTRRPL+LQL H E R E+ +FLH K +TDF +R+EI++ET+R +G K +S PIHL ++SPNVVNLTL+DLPG+TKV V QP I I ++ +I PN IILA++ AN D+ATS+A+KIS Sbjct: 1 MEALIPVINKLQDVFNTVG----ADII-----QLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGVVTRRPLILQLVHVSPEDKRKTTGEENDPATWKNSRHLSKGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKVFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKIS 213
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: DYNB_DICDI (Dynamin-B OS=Dictyostelium discoideum GN=dymB PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.789e-38 Identity = 94/220 (42.73%), Postives = 126/220 (57.27%), Query Frame = 3 Query: 159 NLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSR--------------------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 +L+ ++NK+Q +G +LP I LE++VG+DFLPRGSG+VTRRPLVLQL++ SR E+ EF H RF +F +++EI+ ET+R G K ISS PI L IYSP VV LTL+DLPGLT+VA+E QP I + I++M+ YI PN IILAI+PANQD+ TSDA+K++ Sbjct: 136 SLLPIINKLQENAALIGSE----------ITLPQIIVVGSQSSGKSSVLENLVGRDFLPRGSGLVTRRPLVLQLYQTTTTSRNNVNENEDEDEDDNYYDNDNDDNSLEEWGEFGHTGTNRF-NFQEIKEEIERETERIAGPNKDISSEPIVLKIYSPKVVPLTLVDLPGLTRVAIEDQPPDIEEKIKSMIIDYISNPNSIILAITPANQDIVTSDALKLA 344
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: YB68_SCHPO (Dynamin-like protein C12C2.08 OS=Schizosaccharomyces pombe GN=SPBC12C2.08 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.514e-37 Identity = 98/232 (42.24%), Postives = 126/232 (54.31%), Query Frame = 3 Query: 153 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKL-------------------------EEGSRE-----------YAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 ME LI LVN++Q + + + + LP+I LE+IVGKDFLPRG+GIVTRRPL+LQL L E GS E YAEFLHIP +FTD VR EI++ET R G K I+ +PI+L IYS V+NLTLIDLPGLTK+ V QP I +++ YI +PN IILA+SPAN D+ S+ +K++ Sbjct: 1 MEQLIPLVNQLQDLVY--------NTIGSDFLDLPSIVVVGSQSCGKSSVLENIVGKDFLPRGTGIVTRRPLILQLINLKRKTKNNHDEESTSDNNSEETSAAGETGSLEGIEEDSDEIEDYAEFLHIPDTKFTDMNKVRAEIENETLRVAGANKGINKLPINLKIYSTRVLNLTLIDLPGLTKIPVGDQPTDIEAQTRSLIMEYISRPNSIILAVSPANFDIVNSEGLKLA 224
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX_PERFL (Interferon-induced GTP-binding protein Mx (Fragment) OS=Perca fluviatilis GN=mx PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.275e-24 Identity = 67/165 (40.61%), Postives = 99/165 (60.00%), Query Frame = 3 Query: 249 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIP-RKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 +LPAIA LE++ G LPRGSGIVTR PL L++ + +EG Y + + K D A V K+I+D D G IS I L I SP+V +LTLIDLPG+ +VAV+GQP++I I+ +++ +I++ I L + P N D+AT++A+K++ Sbjct: 34 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRRQEGEEWYGKISYQDCEKEIEDPADVEKKIRDAQDEMAGVGVGISDDLISLEIASPDVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQKFIKRQETISLVVVPCNVDIATTEALKMA 197
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX1_SHEEP (Interferon-induced GTP-binding protein Mx1 OS=Ovis aries GN=MX1 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.245e-23 Identity = 79/200 (39.50%), Postives = 109/200 (54.50%), Query Frame = 3 Query: 147 EKMENLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 E NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L KLE+ + + R+ +D + V KEI + G IS I L + SP+V +LTLIDLPG+T+VAV QP I I++++R YI + I L + PAN D+AT++A++++ Sbjct: 31 ESKGNLYSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLRLKKLEKEGEWKGKVSFLDREIEISDASQVEKEISEAQIAIAGEGMGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPHDIEYQIKSLIRKYILRQETINLVVVPANVDIATTEALRMA 227
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX1_RAT (Interferon-induced GTP-binding protein Mx1 OS=Rattus norvegicus GN=Mx1 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.123e-23 Identity = 76/200 (38.00%), Postives = 113/200 (56.50%), Query Frame = 3 Query: 147 EKMENLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 E ++NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L +L++G + + ++ + + + V +EI + G +ISS I L + SP+V +LTLIDLPG+T+VAV QP I I+ ++ YI+K I L + P+N D+AT++A+K++ Sbjct: 27 ESVDNLCSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKQLKQGEKWSGKVIYKDTEIEISHPSLVEREINKAQNLIAGEGLKISSDLISLEVSSPHVPDLTLIDLPGITRVAVGDQPADIEHKIKRLITEYIQKQETINLVVVPSNVDIATTEALKMA 223
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX_DICLA (Interferon-induced GTP-binding protein Mx OS=Dicentrarchus labrax GN=mx PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.773e-23 Identity = 65/165 (39.39%), Postives = 98/165 (59.39%), Query Frame = 3 Query: 249 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIP-RKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 +LPAIA LE++ G LPRGSGIVTR PL L++ + EG Y + +I + D A V K+I++ ++ G IS I L I SP+V +LTLIDLPG+ +VAV+GQP++I I+ +++ +I K I L + P N D+AT++A+ ++ Sbjct: 32 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRKNEGEEWYGKITYIGFEENIKDPADVEKKIREAQNKIAGPGSGISEDLISLEIASPDVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQKFITKQETISLVVVPCNVDIATTEALNMA 195
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX_ONCMY (Interferon-induced GTP-binding protein Mx OS=Oncorhynchus mykiss GN=mx PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.068e-23 Identity = 65/165 (39.39%), Postives = 99/165 (60.00%), Query Frame = 3 Query: 249 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKR-FTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 +LPAIA LE++ G LPRGSGIVTR PL L++ + +EG + + + + D + V K+I++ D G IS I L I SP+V +LTLIDLPG+ +VAV+GQP++I + I+ ++R +I K I L + P N D+AT++A+K++ Sbjct: 33 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRKKEGEEWHGKISYQDHEEEIEDPSDVEKKIREAQDEMAGVGVGISDDLISLEIGSPDVPDLTLIDLPGIARVAVKGQPENIGEQIKRLIRKFIMKQETISLVVVPCNVDIATTEALKMA 196
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX2_MOUSE (Interferon-induced GTP-binding protein Mx2 OS=Mus musculus GN=Mx2 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.376e-22 Identity = 77/201 (38.31%), Postives = 110/201 (54.73%), Query Frame = 3 Query: 144 REKMENLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 +E + NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L KL EG + + + +D + V + I + G IS I L + SPNV +LTLIDLPG+T+VAV QP I + I+ ++++YI+K I L + P+N D+AT++A+ ++ Sbjct: 28 QESVNNLCSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLRKLNEGEEWRGKVSYDDIEVELSDPSEVEEAINKGQNFIAGVGLGISDKLISLDVSSPNVPDLTLIDLPGITRVAVGNQPADIGRQIKRLIKTYIQKQETINLVVVPSNVDIATTEALSMA 225
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX_SINCH (Interferon-induced GTP-binding protein Mx OS=Siniperca chuatsi GN=mx PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.797e-22 Identity = 65/165 (39.39%), Postives = 97/165 (58.79%), Query Frame = 3 Query: 249 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKR-FTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 +LPAIA LE++ G LPRGSGIVTR PL L++ + +EG Y + + + D A V K+I++ D G IS I L I SP V +LTLIDLPG+ +VAV+GQP++I I+ +++++I K I L + P N D+AT++A+ ++ Sbjct: 32 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRKKEGEEWYGKISYQNHEEEIEDPADVEKKIREAQDEMAGVGVGISDDLISLEIGSPGVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQTFITKQETISLVVVPCNVDIATTEALNMA 195 The following BLAST results are available for this feature:
BLAST of CN186371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186371 ID=CN186371; Name=CN186371; organism=Citrus sinensis; type=EST; length=740bpback to top |