CN186371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX1_BOVIN (Interferon-induced GTP-binding protein Mx1 OS=Bos taurus GN=MX1 PE=2 SV=4) HSP 1 Score: 106.301 bits (264), Expect = 1.797e-22 Identity = 82/212 (38.68%), Postives = 112/212 (52.83%), Query Frame = 3 Query: 120 SPEIST*LREKME---NLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 SPE S E ME NL S + R C L D +L D +LPAIA LE++ G LPRGSGIVTR PLVL+L KL + + ++ D + V KEI + G IS I L + SP+V +LTLIDLPG+T+VAV QP I I++++R YI + I L + PAN D+AT++A++++ Sbjct: 13 SPESSLNGSEDMESKSNLYSQYEEKVRPCIDLID--SLRSLGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLRLKKLGNEDEWKGKVSFLDKEIEIPDASQVEKEISEAQIAIAGEGTGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPPDIEYQIKSLIRKYILRQETINLVVVPANVDIATTEALRMA 221
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MXB_DANRE (Interferon-induced GTP-binding protein MxB OS=Danio rerio GN=mxb PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.347e-22 Identity = 65/165 (39.39%), Postives = 97/165 (58.79%), Query Frame = 3 Query: 249 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKR-FTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 +LPAIA LE++ G LPRGSGIVTR PL L++ + +E + + + + F D A V K+I++ D G IS I L I S NV +LTLIDLPG+ +VAV+GQP++I I+ ++R +I K I L + P N D+AT++A++++ Sbjct: 36 ALPAIAVIGDQSSGKSSVLEALSGVP-LPRGSGIVTRCPLELKMIRSKEDEKWHGRISYQNHEEDFDDPAEVEKKIREAQDEMAGAGVGISEELISLQITSANVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIRMFITKQETINLVVVPCNVDIATTEALQMA 199
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX_EPICO (Interferon-induced GTP-binding protein Mx OS=Epinephelus coioides GN=mx PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22 Identity = 64/165 (38.79%), Postives = 97/165 (58.79%), Query Frame = 3 Query: 249 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIP-RKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 +LPAIA LE++ G LPRGSGIVTR PL L++ + +EG Y + + K D + V +I++ D G IS I L I SP+V +LTLIDLPG+ +VAV+GQP+ I + I+ +++ +I + I L + P N D+AT++A+K++ Sbjct: 32 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRKKEGEEWYGKISYRGCEKELEDPSDVENKIREAQDEMAGVGVGISDDLISLEIASPDVPDLTLIDLPGIARVAVKGQPEDIGKQIKGLIQRFITRQETISLVVVPCNVDIATTEALKMA 195
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX_LARCR (Interferon-induced GTP-binding protein Mx OS=Larimichthys crocea GN=mx PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.830e-22 Identity = 62/165 (37.58%), Postives = 99/165 (60.00%), Query Frame = 3 Query: 249 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAA-VRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 +LPAIA LE++ G LPRGSGIVTR PL L++ + +EG Y + + + + A V K+I++ D+ G +I+ I L I SP+V +LTLI LPG+ +VAV+ QP++I I+ +++ +I+K I L + P N D+AT++A+K++ Sbjct: 32 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRKKEGEEWYGKISYQDYEEEIEVPADVEKKIREAQDKMAGNGVEIADDLISLEIASPDVPDLTLIALPGIARVAVKKQPENIGDQIKRLIQKFIKKQETINLVVVPCNMDIATTEALKMA 195
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX3_RAT (Interferon-induced GTP-binding protein Mx3 OS=Rattus norvegicus GN=Mx3 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.165e-21 Identity = 74/201 (36.82%), Postives = 109/201 (54.23%), Query Frame = 3 Query: 144 REKMENLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 ++ + NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L KL +G + + + +D + V + I + G IS I L + SP+V +LTLIDLPG+T+VAV QP I + I+ ++ +YI+K I L + P+N D+AT++A+ ++ Sbjct: 33 KDSVNNLCSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKLNQGEEWKGKVTYDDIEVELSDPSEVEEAINTGQNHIAGVGLGISDKLISLDVSSPHVPDLTLIDLPGITRVAVGNQPSDIGRQIKRLITNYIQKQETINLVVVPSNVDIATTEALSMA 230
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX1_MOUSE (Interferon-induced GTP-binding protein Mx1 OS=Mus musculus GN=Mx1 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.165e-21 Identity = 66/165 (40.00%), Postives = 97/165 (58.79%), Query Frame = 3 Query: 249 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 +LPAIA LE++ G LPRGSGIVTR PLVL+L KL+EG + + + +D + V + I + G IS I L + SPNV +LTLIDLPG+T+VAV QP I + I+ ++++YI+K I L + P+N D+AT++A+ ++ Sbjct: 35 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLRKLKEGEEWRGKVSYDDIEVELSDPSEVEEAINKGQNFIAGVGLGISDKLISLDVSSPNVPDLTLIDLPGITRVAVGNQPADIGRQIKRLIKTYIQKQETINLVVVPSNVDIATTEALSMA 198
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX2_RAT (Interferon-induced GTP-binding protein Mx2 OS=Rattus norvegicus GN=Mx2 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.522e-21 Identity = 74/201 (36.82%), Postives = 109/201 (54.23%), Query Frame = 3 Query: 144 REKMENLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK-RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 ++ + NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L KL +G + + + +D + V + I + G IS I L + SP+V +LTLIDLPG+T+VAV QP I + I+ ++ +YI+K I L + P+N D+AT++A+ ++ Sbjct: 33 KDSLNNLCSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKLNQGEEWKGKVTYDDIEVELSDPSEVEEAINTGQNHIAGVGLGISDKLISLDVSSPHVPDLTLIDLPGITRVAVGNQPADIGRQIKRLITNYIQKQETINLVVVPSNVDIATTEALSMA 230
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX2_CANFA (Interferon-induced GTP-binding protein Mx2 OS=Canis familiaris GN=MX2 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.522e-21 Identity = 69/168 (41.07%), Postives = 95/168 (56.55%), Query Frame = 3 Query: 249 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL----HKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 +LPAIA LE++ G LPRGSGIVTR PLVL+L HK G Y + +F D + V KEI+ + G+ IS I L I SP V +LTLIDLPG+T+VAV QP I I+ ++++YI+K I L + P N D+AT++A+ ++ Sbjct: 117 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKRDPHKAWRGRISYRK----TELQFQDPSQVEKEIRQAQNIIAGQGLGISHELISLEITSPEVPDLTLIDLPGITRVAVGNQPQDIGVQIKALIKNYIQKQETINLVVVPCNVDIATTEALSMA 279
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MXA_DANRE (Interferon-induced GTP-binding protein MxA OS=Danio rerio GN=mxa PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.427e-21 Identity = 62/165 (37.58%), Postives = 96/165 (58.18%), Query Frame = 3 Query: 249 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIP-RKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 +LPAIA LE++ G LPRGSGIVTR PL L++ + ++ R + + + F D A V K+I+ D G IS I L I S +V +LTLIDLPG+ +VAV+GQP++I I+ ++R ++ + I L + P N D+AT++A++++ Sbjct: 36 ALPAIAVIGDQSSGKSSVLEALSGVP-LPRGSGIVTRCPLELKMIRTKDQDRWHGRISYKTCEEDFDDPAEVEKKIRQAQDEMAGAGVGISEELISLQITSADVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIRKFVTRQETINLVVVPCNVDIATTEALQMA 199
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MSP1_SCHPO (Protein msp1, mitochondrial OS=Schizosaccharomyces pombe GN=msp1 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21 Identity = 59/164 (35.98%), Postives = 92/164 (56.10%), Query Frame = 3 Query: 249 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 +LP+I LE+IVG +FLP+GS +VTRRP+ L L + + Y EF + + TDF+ + + I + + ++ + PI L+IY+ ++ NL+LIDLPG ++ E QP + I + YI +PN IILA+ A+ DLA S A++ S Sbjct: 262 TLPSIVVIGSQSSGKSSVLEAIVGHEFLPKGSNMVTRRPIELTLVHSADTAIPYGEFSGVQLGKITDFSKI-QHILTDLNMAVPSSQGVDDNPIRLTIYASHIPNLSLIDLPGYIQIHSEDQPADLDMKISKLCEKYIREPN-IILAVCAADVDLANSAALRAS 423 The following BLAST results are available for this feature:
BLAST of CN186371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186371 ID=CN186371; Name=CN186371; organism=Citrus sinensis; type=EST; length=740bpback to top |