CN186371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX1_PIG (Interferon-induced GTP-binding protein Mx1 OS=Sus scrofa GN=MX1 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.197e-20 Identity = 76/197 (38.58%), Postives = 103/197 (52.28%), Query Frame = 3 Query: 159 NLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKL--EEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L KL EE + +D + V KE+ G IS I L + SP+V +LTLIDLPG+T+VAV QP I I+++++ YI K I L + P N D+AT++A++++ Sbjct: 40 NLYSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKLVNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEALRMA 233
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX1_MACMU (Interferon-induced GTP-binding protein Mx1 OS=Macaca mulatta GN=MX1 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.197e-20 Identity = 77/200 (38.50%), Postives = 103/200 (51.50%), Query Frame = 3 Query: 159 NLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEE-----GSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L KL G Y ++ D + V KEI + G IS I L I S +V +LTLIDLPG+T+VAV QP I I+ ++R YI++ I L + P+N D+AT++A+ ++ Sbjct: 40 NLCSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKLVNEDEWRGKVSYQDY----EIEILDASEVEKEINKAQNTIAGEGMGISHELITLEISSRDVPDLTLIDLPGITRVAVGNQPPDIGYKIKTLIRKYIQRQETINLVVVPSNVDIATTEALSMA 232
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX2_SHEEP (Interferon-induced GTP-binding protein Mx2 OS=Ovis aries GN=MX2 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.869e-20 Identity = 67/170 (39.41%), Postives = 96/170 (56.47%), Query Frame = 3 Query: 249 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLE---EGS---REYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 +LPAIA LE++ G LPRGSGI+TR PLVL+L K E G R + LH P + V +EI+ + G IS I+L + SP V +LTLIDLPG+T+VAVE QP I I+ ++++YI++ I L + P N D+AT++A+ ++ Sbjct: 117 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIITRCPLVLKLTKRECEWTGKITYRNVTQQLHNPSE-------VEREIRRAQNIIAGNGVGISHELINLEVTSPEVPDLTLIDLPGITRVAVENQPQDIGLQIKALIKTYIQRQETINLVVVPCNVDIATTEALSMA 278
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX1_PONAB (Interferon-induced GTP-binding protein Mx1 OS=Pongo abelii GN=MX1 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.869e-20 Identity = 76/200 (38.00%), Postives = 104/200 (52.00%), Query Frame = 3 Query: 159 NLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEE-----GSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L KL G Y ++ +D + V KEI + G IS I L I S +V +LTLIDLPG+T+VAV QP I I+ +++ YI++ I L + P+N D+AT++A+ ++ Sbjct: 40 NLCSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKLVNEDKWRGKVSYQDY----EIEISDASEVEKEINKAQNTIAGEGMGISHELITLEISSRDVPDLTLIDLPGITRVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMA 232
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX1_PHOVI (Interferon-induced GTP-binding protein Mx1 OS=Phoca vitulina GN=MX1 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.869e-20 Identity = 75/213 (35.21%), Postives = 108/213 (50.70%), Query Frame = 3 Query: 117 PSPEIST*LREKMENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEE-----GSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 P + + EK+ I L++ ++ ALG + + LPAIA LE++ G LPRGSGIVTR PLVL+L KL G Y +F +D + V EI + G + IS I L + SP+V +LTLIDLPG+T+VAV QP I + + ++R YI K I L + P N D+AT++A+ ++ Sbjct: 35 PENSLCSQYEEKVRPCIDLIDSLR----ALGVEQDLA--------LPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKLLNEDEWRGKVSYQDF----EMEISDPSEVEVEISKAQNVIAGEGQGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPADIGRQTKQLIRKYILKQETINLVVVPCNVDIATTEALSMA 230
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX1_HUMAN (Interferon-induced GTP-binding protein Mx1 OS=Homo sapiens GN=MX1 PE=1 SV=4) HSP 1 Score: 98.9821 bits (245), Expect = 2.869e-20 Identity = 76/200 (38.00%), Postives = 104/200 (52.00%), Query Frame = 3 Query: 159 NLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEE-----GSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L KL G Y ++ +D + V KEI + G IS I L I S +V +LTLIDLPG+T+VAV QP I I+ +++ YI++ I L + P+N D+AT++A+ ++ Sbjct: 40 NLCSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKLVNEDKWRGKVSYQDY----EIEISDASEVEKEINKAQNAIAGEGMGISHELITLEISSRDVPDLTLIDLPGITRVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMA 232
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX1_CANFA (Interferon-induced GTP-binding protein Mx1 OS=Canis familiaris GN=MX1 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.869e-20 Identity = 67/166 (40.36%), Postives = 93/166 (56.02%), Query Frame = 3 Query: 249 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKL--EEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 +LPAIA LE++ G LPRGSGIVTR PLVL+L KL E+ R + + +D + V EI D G + IS I L + SP+V +LTLIDLPG+T+VAV QP I + + ++R YI K I L + P N D+AT++A+ ++ Sbjct: 65 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKLINEDEWRGKVSYQDTEME-ISDPSEVEVEINKAQDAIAGEGQGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPADIGRQTKQLIRKYILKQETINLVVVPCNVDIATTEALSMA 228
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX2_PIG (Interferon-induced GTP-binding protein Mx2 OS=Sus scrofa GN=MX2 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.748e-20 Identity = 74/198 (37.37%), Postives = 103/198 (52.02%), Query Frame = 3 Query: 159 NLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLE---EGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 NL S + R C L D AL D +LP IA LE++ G LPRGSGI+TR PL L+L K E +G Y + + D + V +EI+ D G IS I L + SP V +LTLIDLPG+T+VAV QP I I+ ++R YI++ I L + P N D+AT++A++++ Sbjct: 85 NLYSPFEEKVRPCIDLID--SLRALGVEQDLALPTIAVIGDQSSGKSSVLEALSGVP-LPRGSGIITRCPLALRLKKKECPWQGRISYRKV----ELQLQDPSQVEREIRKAQDAIAGSGVGISHELISLEVTSPEVPDLTLIDLPGITRVAVGNQPQDIGLQIKALIRKYIQEQQTINLVVVPCNVDIATTEALRMA 275
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX2_HUMAN (Interferon-induced GTP-binding protein Mx2 OS=Homo sapiens GN=MX2 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.748e-20 Identity = 76/211 (36.02%), Postives = 102/211 (48.34%), Query Frame = 3 Query: 111 PPPSPEIST*LREKMENLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 PPP NL S + R C L D AL D +LPAIA LE++ G LPRGSGIVTR PLVL+L K + D V KEI + G + IS I L I SP V +LT+IDLPG+T+VAV+ QP I I+ +++ YI++ I L + P N D+AT++A+ ++ Sbjct: 72 PPPGNRSQPRAMGPENNLYSQYEQKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKQPCEAWAGRISYRNTELELQDPGQVEKEIHKAQNVMAGNGRGISHELISLEITSPEVPDLTIIDLPGITRVAVDNQPRDIGLQIKALIKKYIQRQQTINLVVVPCNVDIATTEALSMA 279
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MGM1_YEAST (Dynamin-like GTPase MGM1, mitochondrial OS=Saccharomyces cerevisiae GN=MGM1 PE=1 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 3.748e-20 Identity = 67/195 (34.36%), Postives = 101/195 (51.79%), Query Frame = 3 Query: 156 ENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 + +++L ++ T L +SA TL P+I LESIVG++FLP+GS +VTRRP+ L L + A+F + DF V++ + E + ++ +S PI L+I S V +L+L+DLPG +V QP + I ++ Y+ PN IILAIS A+ DLA S A+K S Sbjct: 182 DEMLNLTKQMIEIRTILNKVDSSSAHLTL----PSIVVIGSQSSGKSSVLESIVGREFLPKGSNMVTRRPIELTLVNTPNSNNVTADFPSMRLYNIKDFKEVKRMLM-ELNMAVPTSEAVSEEPIQLTIKSSRVPDLSLVDLPGYIQVEAADQPIELKTKIRDLCEKYLTAPN-IILAISAADVDLANSSALKAS 370 The following BLAST results are available for this feature:
BLAST of CN186371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186371 ID=CN186371; Name=CN186371; organism=Citrus sinensis; type=EST; length=740bpback to top |