CN186371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX2_MACMU (Interferon-induced GTP-binding protein Mx2 OS=Macaca mulatta GN=MX2 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.814e-18 Identity = 62/164 (37.80%), Postives = 85/164 (51.83%), Query Frame = 3 Query: 249 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 +LPAIA LE++ G LPRGSGIVTR PLVL+L K + D V KEI + G IS I L I SP V +LT+IDLPG+ +VAV QP I I+ +++ YI++ I L + P N D+AT++A+ ++ Sbjct: 117 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKQPYKAWAGRISYQNTEIELQDPGQVEKEIHKAQNVMAGNGLGISHELISLEITSPEVPDLTIIDLPGIARVAVGNQPRDIGLQIKALIKRYIQRQQTINLVVVPCNVDIATTEALSMA 279
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX_CHICK (Interferon-induced GTP-binding protein Mx OS=Gallus gallus GN=MX PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.969e-17 Identity = 58/165 (35.15%), Postives = 90/165 (54.55%), Query Frame = 3 Query: 252 LPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRK--RFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 LPAIA LE++ G LPR G++TR PL L+L K+ +E+ ++ + + + V+K I+ D G IS I L I+SP+V +LTLIDLPG+ + AV QP Q I+ +++ YI II+ + P N D+AT++A+K++ Sbjct: 114 LPAIAVIGDRNSGKSSVLEALSGVA-LPRDKGVITRCPLELKLKKMT-APQEWKGVIYYRNTEIQLQNASEVKKAIRKAQDIVAGTNGSISGELISLEIWSPDVPDLTLIDLPGIAREAVGNQPQDNGQQIKTLLKKYIGCKETIIVVVVPCNVDIATTEALKMA 276
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MXC_DANRE (Interferon-induced GTP-binding protein MxC OS=Danio rerio GN=mxc PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.283e-16 Identity = 58/172 (33.72%), Postives = 89/172 (51.74%), Query Frame = 3 Query: 249 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGS--------REYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKIS 740 +LPAIA LE++ G LPRG GIVTR PL+L+L K+ ++ E L P + + G + IS I L I S +V +LTLIDLPG+ +VA QP+ I + I++++ +I++ I L + PAN D+AT++A+K++ Sbjct: 42 NLPAIAVIGDQSSGKSSVLEALSGVA-LPRGIGIVTRCPLILKLKKITRDKNWSGLLTYKDQTEILKEP-------TGIENAVLKAQIALAGTGEGISHEMITLEIQSCDVPDLTLIDLPGIARVATGNQPEDIEKQIKDLIEKFIKRQETISLVVVPANIDIATTEALKMA 205
BLAST of CN186371 vs. ExPASy Swiss-Prot
Match: MX2_BUBBU (Interferon-induced GTP-binding protein Mx2 OS=Bubalus bubalis GN=MX2 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.314e-16 Identity = 61/157 (38.85%), Postives = 88/157 (56.05%), Query Frame = 3 Query: 249 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEKPNCIILAISPANQDLAT 719 +LPAIA LE++ G LPRGSGI+TR PLVL+L K E + +I ++ + + V EI+ + G + IS I+L + SP+V +LTLIDLPG+T+VAVE QP I I+ ++ I++ I L + P N D+AT Sbjct: 114 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIITRCPLVLKLTKRECEWTGKITYRNITQQ-LQNPSEVEWEIRRAQNIIAGNGRGISHELINLEVTSPDVPDLTLIDLPGITRVAVENQPQDIGLQIKALI---IQRQETINLVVVPCNVDIAT 265 The following BLAST results are available for this feature:
BLAST of CN186371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186371 ID=CN186371; Name=CN186371; organism=Citrus sinensis; type=EST; length=740bpback to top |