CN186366

Overview
NameCN186366
Unique NameCN186366
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 304.679 bits (779), Expect = 4.268e-82
Identity = 144/175 (82.29%), Postives = 161/175 (92.00%), Query Frame = -2
Query:  321 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 845
            GAVGLAAAEGAR++GASRIIG+DLN +RF EA+KFG TEFVNPKD+DKPVQQV+AEMTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVG+P+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KE+E+EKFITH+VPFSEIN AFDLM  GE IRCIIRM+
Sbjct:  204 GAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGIRCIIRME 378          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 4.268e-82
Identity = 144/175 (82.29%), Postives = 161/175 (92.00%), Query Frame = -2
Query:  321 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 845
            GAVGLAAAEGAR++GASRIIG+DLN +RF EA+KFG TEFVNPKD+DKPVQQV+AEMTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVG+P+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KE+E+EKFITH+VPFSEIN AFDLM  GE IRCIIRM+
Sbjct:  204 GAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGIRCIIRME 378          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH_FRAAN (Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2)

HSP 1 Score: 303.908 bits (777), Expect = 7.280e-82
Identity = 142/175 (81.14%), Postives = 162/175 (92.57%), Query Frame = -2
Query:  321 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 845
            GAVGLAAAEGAR++GASRIIGVDLN +RF EAKKFG+TEFVNPKD+ KPVQ+VIAE+TNGGVDRS+ECTG++QAMI AFECVHDGWGVAVLVG+P+KD  F THPMN LNERTLKGTFFGNYKPR+D+PSVVEKYMNKE+E++KFITH +PFS+INKAFD ML GE IRCII M+
Sbjct:  205 GAVGLAAAEGARMAGASRIIGVDLNSNRFEEAKKFGITEFVNPKDHKKPVQEVIAELTNGGVDRSIECTGNIQAMIPAFECVHDGWGVAVLVGVPHKDAVFTTHPMNFLNERTLKGTFFGNYKPRTDIPSVVEKYMNKELEVDKFITHQLPFSQINKAFDYMLKGEGIRCIITME 379          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH2_MAIZE (Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 7.280e-82
Identity = 141/175 (80.57%), Postives = 164/175 (93.71%), Query Frame = -2
Query:  321 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 845
            GAVGLAA EGAR++GASRIIGVD+NP+++ +AKKFG TEFVNPKD+DKPVQ+V+ E+TNGGVDRSVECTG+V AMISAFECVHDGWGVAVLVG+P+KDD FKTHPMN L+E+TLKGTFFGNYKPR+DLP+VVE YM KE+ELEKFITH+VPFSEIN AFDLML GES+RCI+RM+
Sbjct:  204 GAVGLAAMEGARLAGASRIIGVDINPAKYEQAKKFGCTEFVNPKDHDKPVQEVLIELTNGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPHKDDQFKTHPMNFLSEKTLKGTFFGNYKPRTDLPNVVEMYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCIMRME 378          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH1_HORVU (Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1 PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 3.613e-81
Identity = 144/175 (82.29%), Postives = 159/175 (90.86%), Query Frame = -2
Query:  321 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 845
            GAVGLAAAEGAR++GASRIIGVDLN  RF EA+KFG TEFVNPKD+ KPVQQV+A+MTNGGVDRSVECTG+V AMI AFECVHDGWGVAVLVG+P+KD  FKTHPMN LNERTLKGTFFGN+KPR+DLP+VVE YM KE+E+EKFITH+VPFSEIN AFDLM  GE IRCIIRMD
Sbjct:  204 GAVGLAAAEGARIAGASRIIGVDLNAVRFEEARKFGCTEFVNPKDHTKPVQQVLADMTNGGVDRSVECTGNVNAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNFKPRTDLPNVVEMYMKKELEVEKFITHSVPFSEINTAFDLMAKGEGIRCIIRMD 378          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 4.719e-81
Identity = 144/175 (82.29%), Postives = 161/175 (92.00%), Query Frame = -2
Query:  321 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 845
            GAVGLAAAEGAR+SGASRIIGVDL+  RF EAKKFGVTEFVNPK ++KPVQ+VIAE+TN GVDRS+ECTGS +AMISAFECVHDGWGVAVLVG+P+KD  FKTHP+N LNERTLKGTFFGNYK R+D+PSVVEKYMNKE+ELEKFITH VPFSEINKAF+ ML GE +RCIIRM+
Sbjct:  205 GAVGLAAAEGARLSGASRIIGVDLHSDRFEEAKKFGVTEFVNPKAHEKPVQEVIAELTNRGVDRSIECTGSTEAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPVNFLNERTLKGTFFGNYKTRTDIPSVVEKYMNKELELEKFITHKVPFSEINKAFEYMLKGEGLRCIIRME 379          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 301.212 bits (770), Expect = 4.719e-81
Identity = 139/175 (79.43%), Postives = 160/175 (91.43%), Query Frame = -2
Query:  321 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 845
            GAVGLAA EGAR+SGASRIIGVDLNP++F +AKKFG T+FVNPKD+ KPV +V+ EMTNGG+DR+VECTG++ AMIS FECVHDGWGVAVLVG+P KDD FKTHPMN LNE+TLKGTFFGNYKPR+DLP+VVE YM KE+ELEKFITH+VPFSEIN AFDLML GES+RC++RMD
Sbjct:  204 GAVGLAAMEGARLSGASRIIGVDLNPAKFEQAKKFGCTDFVNPKDHSKPVHEVLIEMTNGGLDRAVECTGNINAMISCFECVHDGWGVAVLVGVPTKDDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVMRMD 378          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSI (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. indica GN=ADH2 PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 4.719e-81
Identity = 139/175 (79.43%), Postives = 160/175 (91.43%), Query Frame = -2
Query:  321 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 845
            GAVGLAA EGAR+SGASRIIGVDLNP++F +AKKFG T+FVNPKD+ KPV +V+ EMTNGG+DR+VECTG++ AMIS FECVHDGWGVAVLVG+P KDD FKTHPMN LNE+TLKGTFFGNYKPR+DLP+VVE YM KE+ELEKFITH+VPFSEIN AFDLML GES+RC++RMD
Sbjct:  204 GAVGLAAMEGARLSGASRIIGVDLNPAKFEQAKKFGCTDFVNPKDHSKPVHEVLIEMTNGGLDRAVECTGNINAMISCFECVHDGWGVAVLVGVPTKDDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVMRMD 378          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH1_ZEALU (Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurians GN=ADH1 PE=3 SV=2)

HSP 1 Score: 289.656 bits (740), Expect = 1.421e-77
Identity = 136/162 (83.95%), Postives = 153/162 (94.44%), Query Frame = -2
Query:  360 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLM 845
            GAVGLAAAEGAR++GASRIIGVDLNPSRF EA+KFG TEFVNPKD++KPVQ+V+AEMTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVG+P+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KE+E+EKFITH+VPF+EINKAFDLM
Sbjct:  131 GAVGLAAAEGARIAGASRIIGVDLNPSRFEEARKFGCTEFVNPKDHNKPVQEVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFAEINKAFDLM 292          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.856e-77
Identity = 133/175 (76.00%), Postives = 156/175 (89.14%), Query Frame = -2
Query:  321 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 845
            GAVGLAA EGAR++GASRIIGVDLNP+++ +AKKFG T+FVNPKD+ KPVQ+V+ EMTNGGVDR+VECTG + AMI+ FECVHDGWGVAVLVG+P+K+  FKTHPMN LNE+TLKGTFFGNYKPR+DLP VVE YM KE++LEKFITH+VPFS+IN AFDLML GE +RCI R D
Sbjct:  204 GAVGLAAMEGARMAGASRIIGVDLNPAKYEQAKKFGCTDFVNPKDHTKPVQEVLVEMTNGGVDRAVECTGHIDAMIATFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPEVVEMYMRKELDLEKFITHSVPFSQINTAFDLMLKGEGLRCITRTD 378          
The following BLAST results are available for this feature:
BLAST of CN186366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH1_ORYSJ4.268e-8282.29Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]
ADH1_ORYSI4.268e-8282.29Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
ADH_FRAAN7.280e-8281.14Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH ... [more]
ADH2_MAIZE7.280e-8280.57Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 S... [more]
ADH1_HORVU3.613e-8182.29Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1... [more]
ADH_MALDO4.719e-8182.29Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]
ADH2_ORYSJ4.719e-8179.43Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]
ADH2_ORYSI4.719e-8179.43Alcohol dehydrogenase 2 OS=Oryza sativa subsp. ind... [more]
ADH1_ZEALU1.421e-7783.95Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurian... [more]
ADH3_HORVU1.856e-7776.00Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002M15_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002M15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186366 ID=CN186366; Name=CN186366; organism=Citrus sinensis; type=EST; length=846bp
TTTTTTTTTTTTTTTTAGAAAGAAGATTTACACGAAAATCTTTATTACAT
AAGCTACAAAAAGAAGTACAGTAAGAAATAGGTAGAAAACACACCTCTTT
GTACGCCATATGCAGCAAGTCATCAAACAGAAAAACAAAAATAAAAAGGG
ACTGTAAGAAATATGTAGAAAACACAACTCTTTGAAAGCCATTCGCAGCA
AGTCATCAAACATACAGCATAAATTACTTATTCTCGGGGTAATATATAAC
TTGGAAAATTATGTGATCATCTTCATTCTGCCTCCATTAGATTGATCAGC
AACAGCAGACACATCTAACCATCCATGCGAATGATGCACCTAATGCTTTC
TCCCGAAAGCATGAGGTCAAATGCCTTGTTTATCTCCGAGAAGGGCACAG
CATGAGTGATGAATTTCTCAAGCTCCATCTCCTTGTTCATGTATTTTTCA
ACAACTGAAGGAAGATCAGAGCGAGGTTTGTAGTTGCCAAAGAAGGTACC
CTTAAGAGTCCTCTCATTAAGCAGATTCATGGGATGAGTCTTGAATGCAT
CATCTTTGTTTGGCAAACCCACAAGCACAGCAACACCCCAACCATCGTGA
ACGCATTCAAATGCTGAGATCATGGCCTGGACGCTTCCAGTACATTCAAC
ACTTCTATCCACTCCACCATTGGTCATTTCAGCAATCACCTGTTGAACAG
GTTTGTCATAATCTTTTGGATTCACAAACTCGGTAACCCCAAACTTCTTG
GCTTCATTGAATCTGCTTGGGTTCAAATCAACACCAATGATCCTGGAAGC
CCCTGATACTCTTGCCCCTTCGGCAGCAGCAAGGCCAACTGCACCC
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