CN186366

Overview
NameCN186366
Unique NameCN186366
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH8_RANPE (NADP-dependent alcohol dehydrogenase OS=Rana perezi GN=ADH8 PE=1 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 1.139e-34
Identity = 71/172 (41.28%), Postives = 113/172 (65.70%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VG +A  G + +GASRIIGV  +  +F +A + G TE +NPKDYDKP+ +VI E TNGGVD +VEC G ++ M++A +  + G GV V++GL + ++     P+ LL  R+LKG+ FG +K   ++  +V+ YM K++ +   ++  +   +INKAF+L+ SG+ +R I+
Sbjct:  201 GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFK-GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRSIM 371          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH7_HUMAN (Alcohol dehydrogenase class 4 mu/sigma chain OS=Homo sapiens GN=ADH7 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.139e-34
Identity = 70/172 (40.70%), Postives = 107/172 (62.21%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+   G + +GASRIIG+DLN  +F +A   G TE ++PKD  KP+ +V++EMT   V  + E  G ++ MI A    H  +G +V+VG+P         PM L   RT KG  FG  K R D+P +V +++ K+ +L++ ITH +PF +I++ F+L+ SG+SIR ++
Sbjct:  201 GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFELLNSGQSIRTVL 372          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: FADH_YEAST (S-(hydroxymethyl)glutathione dehydrogenase OS=Saccharomyces cerevisiae GN=SFA1 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.487e-34
Identity = 66/178 (37.08%), Postives = 113/178 (63.48%), Query Frame = -2
Query:  321 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKD---YDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 845
            G VGL+  +GA++ GAS+II +D+N  +     +FG T+FVNPK+    D+ + + + EMT+GG+D + +CTG+ + M  A E  H GWG ++++G+    +   T P  L+  R  KG+ FG  K RS++  +++ Y    +++E+FITH  PF EIN+AF+ + +G+ +R +++ D
Sbjct:  206 GTVGLSVIQGAKLRGASKIIAIDINNKKKQYCSQFGATDFVNPKEDLAKDQTIVEKLIEMTDGGLDFTFDCTGNTKIMRDALEACHKGWGQSIIIGVAAAGEEISTRPFQLVTGRVWKGSAFGGIKGRSEMGGLIKDYQKGALKVEEFITHRRPFKEINQAFEDLHNGDCLRTVLKSD 383          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHI_RHOS4 (Alcohol dehydrogenase class-3 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=adhI PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.644e-33
Identity = 69/178 (38.76%), Postives = 107/178 (60.11%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTN------GGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G +GL   +G +++GA  IIGVDLN ++    ++FG+T FVNP + D  V   +  MT       GG D + +CTG+V+ M  A E  H GWG ++++G+       +T P  L+  R  KG+ FG  + R+D+P +V+ YM  +++++  ITH +   EINK FDLM +GESIR ++
Sbjct:  197 GGIGLNVIQGLKLAGADMIIGVDLNNAKKEWGERFGMTHFVNPSEIDGDVVAHLVNMTKTPFDQIGGADYTFDCTGNVKVMRQALEACHRGWGQSIVIGVAPAGAEIQTRPFQLVTGRVWKGSAFGGARGRTDVPKIVDWYMEGKIQIDPMITHILSLEEINKGFDLMHAGESIRSVV 374          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH6_PONAB (Alcohol dehydrogenase 6 OS=Pongo abelii GN=ADH6 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.818e-32
Identity = 66/172 (38.37%), Postives = 107/172 (62.21%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VG +   G + +GA+RIIGVD+N  +F +A++ G TE +NP+D  KP+Q+V+ +MT+ G+D   E  G++  + +A    ++ +GV V+VGL       K       + R+LKG+ FG +K R  +P +V  YM K++ L+  ITH +   +IN+A +LM +G+ IRCI+
Sbjct:  202 GGVGSSVVMGCKAAGATRIIGVDVNKEKFKKARELGATECLNPQDLKKPIQEVLFDMTDAGIDFCFEAIGNLDVLAAALASCNESYGVCVVVGLLPASVQLKISGQLFFSGRSLKGSVFGGWKSRQHIPKLVADYMAKKLNLDPLITHTLNLDKINEAVELMKTGKCIRCIL 373          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: FADH1_SCHPO (Probable S-(hydroxymethyl)glutathione dehydrogenase 1 OS=Schizosaccharomyces pombe GN=SPBC1539.07c PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 5.290e-32
Identity = 70/175 (40.00%), Postives = 106/175 (60.57%), Query Frame = -2
Query:  321 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 845
            G VGLAA +GA  +GASRII +D+N  +   AKKFG T+F++       VQ VI ++T+GGVD + +CTG+V  M    +  H GWG   ++G+          P  ++  R + G+ FG  K RS+LP+ V++YM    +++++IT+  P   INKAFD M  G+ IRC++ M+
Sbjct:  203 GCVGLAAMQGAVAAGASRIIAIDINADKEVYAKKFGATDFIDSSKVKDLVQYVI-DVTDGGVDYAFDCTGNVTVMQQELQFCHKGWGKLCVIGVAAAGKTLDFRPFLVVTGRQVLGSAFGGVKGRSELPNFVDEYMQGHFKVDEYITNEEPLKNINKAFDHMHEGKCIRCVVDMN 376          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: FADH_CANMA (S-(hydroxymethyl)glutathione dehydrogenase OS=Candida maltosa GN=FDH1 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.539e-31
Identity = 69/174 (39.66%), Postives = 103/174 (59.20%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQV--IAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+  +G    GA++II VD++  +    +K G T FVNP    +    V  + EMT+GG D + +CTG+V  M +A E  H GWG +V++G+        T P  L+  RT KG  FG  K RS LP +V  Y++ ++++E+FITH  P + INKAF+ M +G+ IR ++
Sbjct:  205 GIVGLSVIQGCAERGAAQIILVDISDKKEEWGQKLGATAFVNPTKLPEGTTIVDKLIEMTDGGCDFTFDCTGNVGVMRNALEACHKGWGTSVIIGVAAAGKEISTRPFQLVTGRTWKGAAFGGVKGRSQLPGIVNNYLDGKLKVEEFITHREPLAAINKAFEEMHAGDCIRAVV 378          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH6_RAT (Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Adh6 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.625e-31
Identity = 67/173 (38.73%), Postives = 105/173 (60.69%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG-LPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+   G + +GA+RII VD+N  RF +AK  G T+ V+P+D++KP+++V+++M +GGVD   E TG+ +A+ +A    H   GV V VG L +             + R LKG+  G +K + ++P +V  YM K+  ++  ITH +  SE N+A  LM SG+ IRC++
Sbjct:  202 GGVGLSVIIGCKAAGAARIIAVDINKDRFAKAKTVGATDCVDPRDFEKPIEEVLSDMIDGGVDFCFEVTGNTEAVGAALGSCHKDHGVCVTVGALASFTSTLSIRSHLFFSGRILKGSILGGWKTKEEIPKLVSDYMAKKFNIDPLITHTLTLSEANEAVQLMKSGQCIRCVL 374          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: FADH_PICPA (S-(hydroxymethyl)glutathione dehydrogenase OS=Pichia pastoris GN=FLD1 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.702e-30
Identity = 67/176 (38.07%), Postives = 105/176 (59.66%), Query Frame = -2
Query:  324 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQV--IAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 845
            G +GL+  +GA   GAS II +D+N S+   A +FG T+FVNP    +    V  + ++T+GG D + +CTG+VQ M +A E  H GWG ++++G+        T P  L+  R  +G  FG  K R+ +PS+V+ Y++ ++++++FITH      INKAF  M +G  IR +I M
Sbjct:  203 GCIGLSVIQGAVSKGASEIIVIDINDSKKAWADQFGATKFVNPTTLPEGTNIVDYLIDITDGGFDYTFDCTGNVQVMRNALESCHKGWGESIIIGVAAAGKEISTRPFQLVTGRVWRGCAFGGIKGRTQMPSLVQDYLDGKIKVDEFITHRHDLDNINKAFHDMHAGNCIRAVITM 378          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH6_PERMA (Alcohol dehydrogenase 6 OS=Peromyscus maniculatus GN=ADH6 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.446e-30
Identity = 63/172 (36.63%), Postives = 101/172 (58.72%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+   G + +GA+RII VD N  +F +AK  G TE ++P+D++KP+QQV+ +M N G D + E TG+ + + +A    H   GV V+VG          +     + RTLKG+  G +K + ++P +V  Y  K+  L+  ITH +   ++N+A  LM +G+ IRC++
Sbjct:  202 GGVGLSVIMGCKAAGAARIIAVDTNKDKFAKAKTVGATECIDPQDFEKPIQQVLFDMMNDGADFTFEVTGNPETVETALASCHKDHGVCVIVGSLASWIQLNINSHLFFSGRTLKGSVLGGWKTKEEIPKLVSDYTAKKFNLDPLITHTLTLDKVNEAIQLMKNGQCIRCVL 373          
The following BLAST results are available for this feature:
BLAST of CN186366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH8_RANPE1.139e-3441.28NADP-dependent alcohol dehydrogenase OS=Rana perez... [more]
ADH7_HUMAN1.139e-3440.70Alcohol dehydrogenase class 4 mu/sigma chain OS=Ho... [more]
FADH_YEAST1.487e-3437.08S-(hydroxymethyl)glutathione dehydrogenase OS=Sacc... [more]
ADHI_RHOS41.644e-3338.76Alcohol dehydrogenase class-3 OS=Rhodobacter sphae... [more]
ADH6_PONAB1.818e-3238.37Alcohol dehydrogenase 6 OS=Pongo abelii GN=ADH6 PE... [more]
FADH1_SCHPO5.290e-3240.00Probable S-(hydroxymethyl)glutathione dehydrogenas... [more]
FADH_CANMA1.539e-3139.66S-(hydroxymethyl)glutathione dehydrogenase OS=Cand... [more]
ADH6_RAT2.625e-3138.73Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Ad... [more]
FADH_PICPA1.702e-3038.07S-(hydroxymethyl)glutathione dehydrogenase OS=Pich... [more]
ADH6_PERMA8.446e-3036.63Alcohol dehydrogenase 6 OS=Peromyscus maniculatus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002M15_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002M15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186366 ID=CN186366; Name=CN186366; organism=Citrus sinensis; type=EST; length=846bp
TTTTTTTTTTTTTTTTAGAAAGAAGATTTACACGAAAATCTTTATTACAT
AAGCTACAAAAAGAAGTACAGTAAGAAATAGGTAGAAAACACACCTCTTT
GTACGCCATATGCAGCAAGTCATCAAACAGAAAAACAAAAATAAAAAGGG
ACTGTAAGAAATATGTAGAAAACACAACTCTTTGAAAGCCATTCGCAGCA
AGTCATCAAACATACAGCATAAATTACTTATTCTCGGGGTAATATATAAC
TTGGAAAATTATGTGATCATCTTCATTCTGCCTCCATTAGATTGATCAGC
AACAGCAGACACATCTAACCATCCATGCGAATGATGCACCTAATGCTTTC
TCCCGAAAGCATGAGGTCAAATGCCTTGTTTATCTCCGAGAAGGGCACAG
CATGAGTGATGAATTTCTCAAGCTCCATCTCCTTGTTCATGTATTTTTCA
ACAACTGAAGGAAGATCAGAGCGAGGTTTGTAGTTGCCAAAGAAGGTACC
CTTAAGAGTCCTCTCATTAAGCAGATTCATGGGATGAGTCTTGAATGCAT
CATCTTTGTTTGGCAAACCCACAAGCACAGCAACACCCCAACCATCGTGA
ACGCATTCAAATGCTGAGATCATGGCCTGGACGCTTCCAGTACATTCAAC
ACTTCTATCCACTCCACCATTGGTCATTTCAGCAATCACCTGTTGAACAG
GTTTGTCATAATCTTTTGGATTCACAAACTCGGTAACCCCAAACTTCTTG
GCTTCATTGAATCTGCTTGGGTTCAAATCAACACCAATGATCCTGGAAGC
CCCTGATACTCTTGCCCCTTCGGCAGCAGCAAGGCCAACTGCACCC
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