CN186366

Overview
NameCN186366
Unique NameCN186366
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH2_HORVU (Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2 PE=3 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.682e-70
Identity = 126/175 (72.00%), Postives = 150/175 (85.71%), Query Frame = -2
Query:  321 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 845
            GAVGLAA EGAR+SGASRIIGVDLNP++  +AKKFG T+FVNPKD+ KPVQ+VI EMT+GGV+R+VECTG+  AMISAFECVHDGWGVA      +K+  FKTHPMN LNERTL+GTFFGNYKPR+ LP VV+ YM KE+EL+KFITH++PFS+IN AFDLML GE +RC+IR +
Sbjct:  204 GAVGLAAMEGARMSGASRIIGVDLNPAKHEQAKKFGCTDFVNPKDHTKPVQEVIVEMTDGGVNRAVECTGNADAMISAFECVHDGWGVA------HKEAVFKTHPMNFLNERTLRGTFFGNYKPRTGLPGVVDMYMRKELELDKFITHSLPFSQINTAFDLMLRGEGLRCVIRSE 372          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.066e-52
Identity = 93/175 (53.14%), Postives = 129/175 (73.71%), Query Frame = -2
Query:  321 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 845
            G VGLA AEGA+ +GASRIIG+D++  +F+ AK FGVTEFVNPKD+DKP+QQVI ++T+GGVD S EC G+V  M SA EC H GWG +V+VG+        T P  L+  R  KGT FG +K RS +P +VEKY+NKE+++++++TH++  ++INKAFDL+  G  +RC++  D
Sbjct:  206 GTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGGCLRCVLATD 380          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.066e-52
Identity = 93/175 (53.14%), Postives = 129/175 (73.71%), Query Frame = -2
Query:  321 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 845
            G VGLA AEGA+ +GASRIIG+D++  +F+ AK FGVTEFVNPKD+DKP+QQVI ++T+GGVD S EC G+V  M SA EC H GWG +V+VG+        T P  L+  R  KGT FG +K RS +P +VEKY+NKE+++++++TH++  ++INKAFDL+  G  +RC++  D
Sbjct:  206 GTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGGCLRCVLATD 380          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 2.284e-51
Identity = 91/172 (52.91%), Postives = 125/172 (72.67%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGLA AEGA+ +GASRIIG+D++  ++  AKKFGV EFVNPKD+DKP+Q+VI ++T+GGVD S EC G+V  M +A EC H GWG +V+VG+        T P  L+  R  KGT FG +K R+ +P +VEKYMNKE++++++ITH +   EINKAFDL+  G  +RC++
Sbjct:  204 GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCLRCVL 375          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.679e-51
Identity = 90/172 (52.33%), Postives = 127/172 (73.84%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGLA AEGA+ +GASRIIG+D++ ++++ AK FGVTEF+NPKD++KP+QQVI ++T+GGVD S EC G+V  M SA EC H GWG +V+VG+        T P  L+  R  KGT FG +K RS +P +VEKY+ KE++++++ITH +   EINKAFDL+  G+ +RC++
Sbjct:  203 GTVGLAVAEGAKSAGASRIIGIDIDSNKYDTAKNFGVTEFINPKDHEKPIQQVIIDLTDGGVDYSFECLGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKEIKVDEYITHNLTLLEINKAFDLLHEGQCLRCVL 374          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.763e-49
Identity = 87/172 (50.58%), Postives = 125/172 (72.67%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            GAVGLA   G +V+GA+RIIG+DLNP++F  AK+FG TEFVNPKD+ KP+Q+V+ EMT+GGVD S EC G+VQ M +A E  H GWG +V++G+        T P  L+  R  KGT FG +K    +P +VE YM+K++++++F+TH +PF +IN+ F+LM +G+SIR ++
Sbjct:  203 GAVGLAVIMGCKVAGATRIIGIDLNPAKFETAKEFGATEFVNPKDHSKPIQEVLVEMTDGGVDYSFECIGNVQIMRAALEACHKGWGESVIIGVAGAGQEISTRPFQLVTGRVWKGTAFGGWKSVESVPKLVEDYMSKKLKVDEFVTHTLPFEKINEGFELMHAGKSIRTVL 374          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.364e-48
Identity = 87/172 (50.58%), Postives = 123/172 (71.51%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            GAVGLAA  G +V+GA+RIIGVD+NP +F +A +FG TE +NPKD+ +PVQ+V+ EMT+GGVD S EC G+V+ M SA E  H GWG +V++G+        T P  L+  R  K T FG +K    +P +VE YMNK++++++F+TH +PF  IN+ FDLM +G+SIRC++
Sbjct:  202 GAVGLAAIMGCKVAGATRIIGVDINPEKFGKAAEFGATECLNPKDHARPVQEVLVEMTDGGVDYSFECIGNVEIMRSALEACHKGWGESVIIGVAGAGQEIATRPFQLVTGRVWKATAFGGWKSVESVPKLVEDYMNKKLKVDEFVTHTLPFDSINEGFDLMHAGKSIRCVL 373          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 190.274 bits (482), Expect = 1.173e-47
Identity = 87/174 (50.00%), Postives = 126/174 (72.41%), Query Frame = -2
Query:  324 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 845
            G VGLA   G +V+GASRIIGVD+N  +F  AK+FG TE +NP+D+ KP+Q+V+ EMT+GGVD S EC G+V+ M +A E  H GWGV+V+VG+    +   T P  L+  RT KGT FG +K    +P +V +YM+K++++++F+TH + F EINKAF+LM SG+SIR ++++
Sbjct:  201 GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 374          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.613e-47
Identity = 85/174 (48.85%), Postives = 124/174 (71.26%), Query Frame = -2
Query:  324 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 845
            G VGLA AEGA+ +GASR+IG+D++  +F+ AK FGVTEFVNPK++DKP+QQV+ ++T+GGVD S EC G+V  M +A EC   GWG +V+VG+        T P  L+  R  KGT FG +K R+ +P +V+KYM KE++++++ITH +  ++IN AF L+  G  +RC++ M
Sbjct:  206 GTVGLAVAEGAKAAGASRVIGIDIDNKKFDVAKNFGVTEFVNPKEHDKPIQQVLVDLTDGGVDYSFECIGNVSIMRAALECSDKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVDKYMKKEIKVDEYITHNMNLADINDAFHLLHEGGCLRCVLAM 379          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHL_GADMO (Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.413e-47
Identity = 84/172 (48.84%), Postives = 122/172 (70.93%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            GA+GLA   G + +GASRII +D+NP +F  AK+FG T+ VNPKD+ KPV+QV+ EMT+GGVD S EC G++  M +A E  H GWG +V++G+        T P  L+  RT KGT FG YK    +P +VE+YMNK++++++F+TH +PF +I++ FDLM +G+SIR ++
Sbjct:  202 GALGLAVIMGCQAAGASRIIAIDVNPDKFRIAKEFGATDLVNPKDHSKPVEQVLVEMTDGGVDYSFECVGNIAVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRTWKGTAFGGYKSVESVPKLVEEYMNKKVKVDEFVTHTLPFEKIHEGFDLMGAGKSIRTVL 373          
The following BLAST results are available for this feature:
BLAST of CN186366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH2_HORVU1.682e-7072.00Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2... [more]
ADHX_ORYSJ2.066e-5253.14Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSI2.066e-5253.14Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ARATH2.284e-5152.91Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_PEA8.679e-5152.33Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_SPAAU4.763e-4950.58Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHH_GADMO2.364e-4850.58Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADHX_HUMAN1.173e-4750.00Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHX_MAIZE2.613e-4748.85Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHL_GADMO3.413e-4748.84Alcohol dehydrogenase class-3 chain L OS=Gadus mor... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002M15_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002M15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186366 ID=CN186366; Name=CN186366; organism=Citrus sinensis; type=EST; length=846bp
TTTTTTTTTTTTTTTTAGAAAGAAGATTTACACGAAAATCTTTATTACAT
AAGCTACAAAAAGAAGTACAGTAAGAAATAGGTAGAAAACACACCTCTTT
GTACGCCATATGCAGCAAGTCATCAAACAGAAAAACAAAAATAAAAAGGG
ACTGTAAGAAATATGTAGAAAACACAACTCTTTGAAAGCCATTCGCAGCA
AGTCATCAAACATACAGCATAAATTACTTATTCTCGGGGTAATATATAAC
TTGGAAAATTATGTGATCATCTTCATTCTGCCTCCATTAGATTGATCAGC
AACAGCAGACACATCTAACCATCCATGCGAATGATGCACCTAATGCTTTC
TCCCGAAAGCATGAGGTCAAATGCCTTGTTTATCTCCGAGAAGGGCACAG
CATGAGTGATGAATTTCTCAAGCTCCATCTCCTTGTTCATGTATTTTTCA
ACAACTGAAGGAAGATCAGAGCGAGGTTTGTAGTTGCCAAAGAAGGTACC
CTTAAGAGTCCTCTCATTAAGCAGATTCATGGGATGAGTCTTGAATGCAT
CATCTTTGTTTGGCAAACCCACAAGCACAGCAACACCCCAACCATCGTGA
ACGCATTCAAATGCTGAGATCATGGCCTGGACGCTTCCAGTACATTCAAC
ACTTCTATCCACTCCACCATTGGTCATTTCAGCAATCACCTGTTGAACAG
GTTTGTCATAATCTTTTGGATTCACAAACTCGGTAACCCCAAACTTCTTG
GCTTCATTGAATCTGCTTGGGTTCAAATCAACACCAATGATCCTGGAAGC
CCCTGATACTCTTGCCCCTTCGGCAGCAGCAAGGCCAACTGCACCC
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