CN186366

Overview
NameCN186366
Unique NameCN186366
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3018 contig Csv1_Contig3018:43..889. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHX_BOVIN (Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.458e-47
Identity = 82/174 (47.13%), Postives = 128/174 (73.56%), Query Frame = -2
Query:  324 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 845
            G VGLA   G +++GA+RIIGVD+N  +F  AK+FG +E +NP+D+ KP+Q+V+ EMT+GGVD S EC G+V+ M +A E  H GWG++V+VG+    +   T P  L+  RT KGT FG +K    +P +V +YM+K++++++F+TH++PF +IN+AFDLM +G+SIR ++++
Sbjct:  201 GGVGLAVIMGCKMAGAARIIGVDINKDKFARAKEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGISVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHSLPFDQINEAFDLMHAGKSIRTVVKL 374          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.604e-47
Identity = 85/173 (49.13%), Postives = 125/173 (72.25%), Query Frame = -2
Query:  327 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIR 845
            G VGLA   G +V+GASRIIG+DLN  +F +AK+FG TE ++P D+ KP+Q+V+ EMT+GGVD S EC G+V  M +A E  H GWGV+V+VG+        T P  L+  RT KGT FG +K    +P +V++YM+K+M++++F+TH +PF +IN+AF+LM +G+SIR +++
Sbjct:  200 GGVGLAVIMGCKVAGASRIIGIDLNKDKFAKAKEFGATECISPADFKKPIQEVLIEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVDEYMSKKMKVDEFVTHTLPFEQINEAFELMHAGKSIRSVLK 372          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 9.931e-47
Identity = 83/174 (47.70%), Postives = 128/174 (73.56%), Query Frame = -2
Query:  324 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 845
            G VGLA   G +V+GASRIIGVD+N  +F +AK+FG +E +NP+D+ KP+Q+V+ EMT+GGVD S EC G+V+ M +A E  H GWGV+V+VG+    +   T P  L+  RT KGT FG +K    +P +V +YM+K++++++F+TH++ F +IN+AF+LM +G+SIR ++++
Sbjct:  201 GGVGLAVIMGCKVAGASRIIGVDINKDKFAKAKEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHSLSFDQINEAFELMHAGKSIRTVVKL 374          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 2.212e-46
Identity = 86/174 (49.43%), Postives = 124/174 (71.26%), Query Frame = -2
Query:  324 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 845
            G VGLA   G +V+GASRIIG+D+N  +F +AK+FG TE +NP+D+ K +Q+V+ EMT+GGVD S EC G+V+ M SA E  H GWGV+V+VG+    +   T P  L+  RT KGT FG +K    +P +V +YM+K++++++F+T  + F +INKAFDLM SG SIR +++M
Sbjct:  201 GGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGATECINPQDFSKSIQEVLIEMTDGGVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINKAFDLMHSGNSIRTVLKM 374          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 6.437e-46
Identity = 83/174 (47.70%), Postives = 120/174 (68.97%), Query Frame = -2
Query:  324 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 845
            G VGL+ A+GA++ GA++I+GVD+NP++  +AK FGVT+F+N  D  +P+ QVI  MT GG D S EC G      +A +   DGWG+ V +G+P        H    L+ ++LKGT FG +KP+SDLPS+++KYMNKE+ +++FITH + F EINKAF LM  G+ +RC++ M
Sbjct:  206 GTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTDFINSNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKPEVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAFVLMREGKCLRCVLHM 379          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHL3_ARATH (Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.407e-46
Identity = 89/174 (51.15%), Postives = 118/174 (67.82%), Query Frame = -2
Query:  324 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 845
            G+VGLA AEGAR  GASRIIGVD N S+F + K  GVT+F+NPKD  KPV Q+I E+T GGVD S ECTG+V  +  AF   H GWG  VLVG+         HPM L + R + G+ FG +KP+S LP+  ++ M   ++LE FIT+ +PF +IN AF L+  G+S+RCI+++
Sbjct:  215 GSVGLAVAEGARARGASRIIGVDANASKFEKGKLMGVTDFINPKDLTKPVHQMIREITGGGVDYSFECTGNVDVLREAFLSTHVGWGSTVLVGIYPTPRTLPLHPMELFDGRRITGSVFGGFKPKSQLPNFAQQCMKGVVKLEPFITNELPFEKINDAFQLLRDGKSLRCILQI 388          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.434e-45
Identity = 86/172 (50.00%), Postives = 120/172 (69.77%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            GAVGLA A G + +GA+RIIG+D+N S+F   KKFG+TEFVNPK + K VQ+V+ EMT+ GVD + EC G+V  M +A E  H GWG +V+VG+    +   T P  L+  R  KGT FG +K R  +P +V+ YMNK++ L++F++H + F +IN+AFDLM  GESIR ++
Sbjct:  203 GAVGLAVAMGCKAAGAARIIGIDINESKFEIGKKFGITEFVNPKKFCKSVQKVLGEMTDVGVDFTFECIGNVGVMRAALESCHKGWGTSVIVGVAAHGEEISTRPFQLVTGRVWKGTAFGGFKSRDSVPKLVDDYMNKKLLLDEFVSHKLSFKKINEAFDLMHKGESIRAVL 374          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 182.57 bits (462), Expect = 2.446e-45
Identity = 83/174 (47.70%), Postives = 125/174 (71.84%), Query Frame = -2
Query:  324 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 845
            G VGLA   G +V+GASRIIG+D+N  +F +AK+FG +E ++P+D+ K +Q+V+ EMT+GGVD S EC G+V+ M SA E  H GWGV+V+VG+    +   T P  L+  RT KGT FG +K    +P +V +YM+K++++++F+T  + F +IN+AFDLM SG+SIR +++M
Sbjct:  201 GGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGASECISPQDFSKSIQEVLVEMTDGGVDYSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINQAFDLMHSGDSIRTVLKM 374          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 181.8 bits (460), Expect = 4.172e-45
Identity = 82/174 (47.13%), Postives = 123/174 (70.69%), Query Frame = -2
Query:  324 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 845
            G VGLAA  G + +GASRII VD+N  +F  AK+FG TE +NP+D+ KP+Q+V+ E T+GGVD S EC G+V+ M +A E  H GWGV+V+VG+    +   T P  L+  RT KGT FG +K    +P +V +YM+K++ +++F+T+ + F +IN+AF+LM SG+SIR ++++
Sbjct:  201 GGVGLAAIMGCKAAGASRIIAVDINKDKFARAKEFGATECINPQDFSKPIQEVLVEKTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAGAGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKINVDEFVTNTLSFDQINEAFELMHSGKSIRTVVKI 374          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: FRMA_SYNY3 (S-(hydroxymethyl)glutathione dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=frmA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.532e-44
Identity = 84/172 (48.84%), Postives = 113/172 (65.70%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G +GLA  +GAR + A RII +D NP++F  AK+ G T+ +NPKD+D+P+QQVI EMT  GVD S EC G+V+ M SA EC H GWG +V++G+        T P  L+  R   GT FG  K RS LP +VE+ M  E++L  F+TH +   +IN+AFDLM  G+SIR +I
Sbjct:  196 GGIGLAVVQGARQAKAGRIIAIDTNPAKFELAKQMGATDCINPKDHDQPIQQVIVEMTGWGVDHSFECIGNVEVMRSALECAHRGWGQSVIIGVAGAGQEISTRPFQLVTGRKWMGTAFGGVKGRSQLPGMVEQSMRGEIQLAPFVTHTMELKDINQAFDLMHDGKSIRSVI 367          
The following BLAST results are available for this feature:
BLAST of CN186366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADHX_BOVIN4.458e-4747.13Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH... [more]
ADHX_UROHA7.604e-4749.13Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADHX_HORSE9.931e-4747.70Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADHX_RAT2.212e-4649.43Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHL6_ARATH6.437e-4647.70Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
ADHL3_ARATH8.407e-4651.15Alcohol dehydrogenase-like 3 OS=Arabidopsis thalia... [more]
ADHX_OCTVU1.434e-4550.00Alcohol dehydrogenase class-3 OS=Octopus vulgaris ... [more]
ADHX_MOUSE2.446e-4547.70Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADHX_RABIT4.172e-4547.13Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]
FRMA_SYNY33.532e-4448.84S-(hydroxymethyl)glutathione dehydrogenase OS=Syne... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002M15_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002M15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186366 ID=CN186366; Name=CN186366; organism=Citrus sinensis; type=EST; length=846bp
TTTTTTTTTTTTTTTTAGAAAGAAGATTTACACGAAAATCTTTATTACAT
AAGCTACAAAAAGAAGTACAGTAAGAAATAGGTAGAAAACACACCTCTTT
GTACGCCATATGCAGCAAGTCATCAAACAGAAAAACAAAAATAAAAAGGG
ACTGTAAGAAATATGTAGAAAACACAACTCTTTGAAAGCCATTCGCAGCA
AGTCATCAAACATACAGCATAAATTACTTATTCTCGGGGTAATATATAAC
TTGGAAAATTATGTGATCATCTTCATTCTGCCTCCATTAGATTGATCAGC
AACAGCAGACACATCTAACCATCCATGCGAATGATGCACCTAATGCTTTC
TCCCGAAAGCATGAGGTCAAATGCCTTGTTTATCTCCGAGAAGGGCACAG
CATGAGTGATGAATTTCTCAAGCTCCATCTCCTTGTTCATGTATTTTTCA
ACAACTGAAGGAAGATCAGAGCGAGGTTTGTAGTTGCCAAAGAAGGTACC
CTTAAGAGTCCTCTCATTAAGCAGATTCATGGGATGAGTCTTGAATGCAT
CATCTTTGTTTGGCAAACCCACAAGCACAGCAACACCCCAACCATCGTGA
ACGCATTCAAATGCTGAGATCATGGCCTGGACGCTTCCAGTACATTCAAC
ACTTCTATCCACTCCACCATTGGTCATTTCAGCAATCACCTGTTGAACAG
GTTTGTCATAATCTTTTGGATTCACAAACTCGGTAACCCCAAACTTCTTG
GCTTCATTGAATCTGCTTGGGTTCAAATCAACACCAATGATCCTGGAAGC
CCCTGATACTCTTGCCCCTTCGGCAGCAGCAAGGCCAACTGCACCC
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