CN186366

Overview
NameCN186366
Unique NameCN186366
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH1A_HUMAN (Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A PE=1 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 9.003e-40
Identity = 77/172 (44.77%), Postives = 113/172 (65.70%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+A  G + +GA+RII VD+N  +F +AK+ G TE +NP+DY KP+Q+V+ EMT+GGVD S E  G +  M+++  C H+  G +V+VG+P        +PM LL  RT KG   G +K +  +P +V  +M K+  L+  ITH +PF +IN+ FDL+ SG+SIR I+
Sbjct:  202 GGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSMNPMLLLTGRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTIL 373          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH1G_HUMAN (Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.536e-39
Identity = 75/172 (43.60%), Postives = 113/172 (65.70%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+   G + +GA+RII VD+N  +F +AK+ G TE +NP+DY KP+Q+V+ EMT+GGVD S E  G +  M+++  C H+  G +V+VG+P        +PM LL  RT KG  FG +K +  +P +V  +M K+  L+  IT+ +PF +IN+ FDL+ SG+SIR ++
Sbjct:  202 GGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNILPFEKINEGFDLLRSGKSIRTVL 373          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH4_HUMAN (Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE=1 SV=4)

HSP 1 Score: 162.925 bits (411), Expect = 2.006e-39
Identity = 74/172 (43.02%), Postives = 109/172 (63.37%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+A  G + +GASRIIG+D+N  +F +AK  G T+ +NP+D  KP+Q+VI E+T GGVD +++C G  + M +A +C   GWG    +G+          P  L+  RT+ GTFFG +K    +P +V  Y NK+  L+  +TH +PF +I++AFDLM  G+SIR I+
Sbjct:  207 GGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDCLNPRDLHKPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAAGSKGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDKISEAFDLMNQGKSIRTIL 378          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH1_PERMA (Alcohol dehydrogenase 1 OS=Peromyscus maniculatus GN=ADH1 PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 2.006e-39
Identity = 77/172 (44.77%), Postives = 113/172 (65.70%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+   G + +GA+RII VD+N  +F +AK+ G TE +NP DY KP+Q+V+ EMT+GGVD S E  G +  M S+    H   GV+V+VG+P    +   +PM+LL  R+ KG  FG +K +  +P +V  +M K+  LE  ITH +PF +IN+AFDL+ +G+SIR ++
Sbjct:  202 GGVGLSVIIGCKAAGAARIIAVDINKDKFAKAKELGATECINPLDYSKPIQEVLQEMTDGGVDFSFEVIGRLDTMTSSLLSCHASCGVSVIVGVPPNAQSLSVNPMSLLMGRSWKGAIFGGFKSKDSVPKLVTDFMAKKFPLEPLITHVLPFEKINEAFDLLRAGKSIRTVL 373          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH1_MOUSE (Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 2.006e-39
Identity = 79/172 (45.93%), Postives = 112/172 (65.12%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+   G + +GA+RII VD+N  +F +AK+ G TE +NP+DY KP+Q+V+ EMT+GGVD S E  G +  M SA    H   GV+V+VG+P        +PM LL  RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+AFDL+ SG+SIR ++
Sbjct:  202 GGVGLSVIIGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYSKPIQEVLQEMTDGGVDFSFEVIGRLDTMTSALLSCHAACGVSVVVGVPPNAQNLSMNPMLLLLGRTWKGAIFGGFKSKDSVPKLVADFMAKKFPLDPLITHVLPFEKINEAFDLLRSGKSIRTVL 373          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH1G_PAPHA (Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH1C PE=2 SV=3)

HSP 1 Score: 162.925 bits (411), Expect = 2.006e-39
Identity = 75/172 (43.60%), Postives = 114/172 (66.28%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+A  G + +GA+RII VD+N  +F +AK+ G TE +NP+DY KP+Q+V+ EMT+GGVD S E  G +  ++++  C H+  G +V+VG+P        +P+ LL  RT KG  FG +K +  +P +V  +M K+  L+  IT+ +PF +IN+ FDL+ SG+SIR I+
Sbjct:  202 GGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTIMASLLCCHEACGTSVIVGVPPDSQNLSINPVLLLTGRTWKGAIFGGFKSKESVPKLVSDFMAKKFSLDALITNVLPFEKINEGFDLLRSGKSIRTIL 373          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH1A_PONAB (Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A PE=2 SV=3)

HSP 1 Score: 162.54 bits (410), Expect = 2.619e-39
Identity = 76/172 (44.19%), Postives = 112/172 (65.12%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+   G + +GA+RII VD+N  +F +AK+ G TE +NP+DY+KP+Q+V+ EMT+GGVD S E  G +  M+++  C H+  G +V+VG+P        +PM LL  RT KG   G +K +  +P +V  +M K+  L+  ITH +PF +IN  FDL+ SG+SIR I+
Sbjct:  202 GGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYNKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSMNPMLLLTGRTWKGAVLGGFKSKECVPKLVADFMAKKFSLDALITHVLPFEKINDGFDLLHSGKSIRTIL 373          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHL4_ARATH (Alcohol dehydrogenase-like 4 OS=Arabidopsis thaliana GN=At1g64710 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.468e-39
Identity = 72/174 (41.38%), Postives = 115/174 (66.09%), Query Frame = -2
Query:  324 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 845
            GAVGLA AEGAR  GAS+IIG+D+NP +F   ++ G++EF+NPK+ DK V + + E+T GGV+ S EC GS++A+  AF   + G GV V++G+         HPM L   R++  + FG +KP++ LP  + + +   + L+ FI+H +PF +IN+A  L+  G+++RC++ +
Sbjct:  207 GAVGLAVAEGARARGASKIIGIDINPDKFQLGREAGISEFINPKESDKAVHERVMEITEGGVEYSFECAGSIEALREAFLSTNSGVGVTVMLGVHASPQLLPIHPMELFQGRSITASVFGGFKPKTQLPFFITQCLQGLLNLDLFISHQLPFHDINEAMQLLHQGKALRCLLHL 380          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHL7_ARATH (Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.954e-39
Identity = 78/176 (44.32%), Postives = 115/176 (65.34%), Query Frame = -2
Query:  324 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKP-VQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNE-RTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 845
            G++GLA AEGAR+ GASRIIGVD+NP++F   +KFGVTEFVN    +K  V +VI EMT+GG D   EC GS   +  A+ C   GWG  + +G+            ++L+  + L G+ FG  K ++ +P ++++Y++ E+EL+KF+TH + F EIN AF L+L G+ IRC++ M
Sbjct:  214 GSIGLAVAEGARLCGASRIIGVDINPTKFQVGQKFGVTEFVNSMTCEKNRVSEVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGKTITLGVDKPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLKRYLSNELELDKFVTHEMKFEEINDAFQLLLEGKCIRCVLWM 389          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH1_GEOAT (Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH1 PE=2 SV=3)

HSP 1 Score: 160.614 bits (405), Expect = 9.954e-39
Identity = 77/172 (44.77%), Postives = 113/172 (65.70%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+A  G + +GA+RII VD+N  +F +AK+ G TE VNP+DYDKP+ +V+ EMT+GGVD S E  G +   +SA  C  +  GV+V+VG+P    +    P  LL+ R+ KG  FG YK + D+P +V  +M K+  LE  IT+  P ++IN+ FDL+ +G+SIR ++
Sbjct:  202 GRVGLSAIIGCKAAGAARIIAVDINKDKFAKAKELGATECVNPQDYDKPIYEVLQEMTDGGVDFSFEVIGRLDTKVSALMCCQESHGVSVIVGVPPNAQSLTIDPKVLLSGRSWKGAVFGGYKGKDDVPKLVADFMAKKFPLEPLITNVFPLAKINEGFDLLRAGKSIRTVL 373          
The following BLAST results are available for this feature:
BLAST of CN186366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH1A_HUMAN9.003e-4044.77Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A ... [more]
ADH1G_HUMAN1.536e-3943.60Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C ... [more]
ADH4_HUMAN2.006e-3943.02Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE... [more]
ADH1_PERMA2.006e-3944.77Alcohol dehydrogenase 1 OS=Peromyscus maniculatus ... [more]
ADH1_MOUSE2.006e-3945.93Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE... [more]
ADH1G_PAPHA2.006e-3943.60Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH... [more]
ADH1A_PONAB2.619e-3944.19Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A ... [more]
ADHL4_ARATH4.468e-3941.38Alcohol dehydrogenase-like 4 OS=Arabidopsis thalia... [more]
ADHL7_ARATH9.954e-3944.32Alcohol dehydrogenase-like 7 OS=Arabidopsis thalia... [more]
ADH1_GEOAT9.954e-3944.77Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002M15_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002M15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186366 ID=CN186366; Name=CN186366; organism=Citrus sinensis; type=EST; length=846bp
TTTTTTTTTTTTTTTTAGAAAGAAGATTTACACGAAAATCTTTATTACAT
AAGCTACAAAAAGAAGTACAGTAAGAAATAGGTAGAAAACACACCTCTTT
GTACGCCATATGCAGCAAGTCATCAAACAGAAAAACAAAAATAAAAAGGG
ACTGTAAGAAATATGTAGAAAACACAACTCTTTGAAAGCCATTCGCAGCA
AGTCATCAAACATACAGCATAAATTACTTATTCTCGGGGTAATATATAAC
TTGGAAAATTATGTGATCATCTTCATTCTGCCTCCATTAGATTGATCAGC
AACAGCAGACACATCTAACCATCCATGCGAATGATGCACCTAATGCTTTC
TCCCGAAAGCATGAGGTCAAATGCCTTGTTTATCTCCGAGAAGGGCACAG
CATGAGTGATGAATTTCTCAAGCTCCATCTCCTTGTTCATGTATTTTTCA
ACAACTGAAGGAAGATCAGAGCGAGGTTTGTAGTTGCCAAAGAAGGTACC
CTTAAGAGTCCTCTCATTAAGCAGATTCATGGGATGAGTCTTGAATGCAT
CATCTTTGTTTGGCAAACCCACAAGCACAGCAACACCCCAACCATCGTGA
ACGCATTCAAATGCTGAGATCATGGCCTGGACGCTTCCAGTACATTCAAC
ACTTCTATCCACTCCACCATTGGTCATTTCAGCAATCACCTGTTGAACAG
GTTTGTCATAATCTTTTGGATTCACAAACTCGGTAACCCCAAACTTCTTG
GCTTCATTGAATCTGCTTGGGTTCAAATCAACACCAATGATCCTGGAAGC
CCCTGATACTCTTGCCCCTTCGGCAGCAGCAAGGCCAACTGCACCC
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