CN186366

Overview
NameCN186366
Unique NameCN186366
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH1_APTAU (Alcohol dehydrogenase 1 OS=Apteryx australis GN=ADH1 PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 3.202e-37
Identity = 74/172 (43.02%), Postives = 109/172 (63.37%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+   G + +GASRII +D+N  +F +AK+ G T+ VNPKD+ KP+ +V+ EMT  GVD S E  G  + M +A    H  +GV+V++G+P   +     PM L + RT KG+ FG +K +  +P +V  YM K+  LE  ITH +PF +IN+ FDL+  G+SIR ++
Sbjct:  202 GGVGLSVVMGCKAAGASRIIAIDINKDKFAKAKELGATDCVNPKDFTKPIHEVLMEMTGLGVDYSFEVIGHTETMAAALASCHFNYGVSVILGVPPAAEKISFDPMLLFSGRTWKGSVFGGWKSKDAVPKLVADYMEKKFVLEPLITHTLPFIKINEGFDLLRKGKSIRSVL 373          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH1_ANAPL (Alcohol dehydrogenase 1 (Fragment) OS=Anas platyrhynchos GN=ADH1 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.182e-37
Identity = 73/172 (42.44%), Postives = 111/172 (64.53%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+   G + +GASRII VD+N  +F +AK+ G T+ +NPKD+ +P+ +V+  MT  GVD S E  G ++ M++A    H  +GV+V+VG+P         PM L + RT KG+ FG +K +  +P +V  YM K+  L+  ITH +PFS+IN+ FDL+ +G+SIR ++
Sbjct:   12 GGVGLSVIMGCKAAGASRIIAVDINSDKFAKAKELGATDCINPKDHKEPIHKVLIGMTGYGVDYSFEVIGRIETMVAALASCHYNYGVSVIVGVPPAAQNITFDPMLLFSGRTWKGSVFGGWKSKDSVPKLVADYMKKKFVLDPLITHTLPFSKINEGFDLLRAGKSIRSVL 183          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHQ_RABIT (Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctolagus cuniculus GN=ADH2-2 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.589e-36
Identity = 74/172 (43.02%), Postives = 107/172 (62.21%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+A  G + +GASRII VD+N  +F +AK  G T+ +NP++ +KPVQ VI EMTNGGVD +++C G  + M +  +C   GWG    VG+   D      P+ L+  RTL+G+ FG +     +P +V  Y N +  LE  +TH +PF +IN+A DL+  G+SIR I+
Sbjct:  207 GGVGLSAVIGCKTAGASRIIAVDINSDKFAKAKALGATDCLNPRELNKPVQDVIVEMTNGGVDFAIDCAGGSEVMKATVDCTTVGWGSCTFVGVNVNDKGLTISPVELILGRTLRGSSFGGWDV-DTVPKLVSDYKNGKFNLEALVTHTLPFEKINEALDLLKQGKSIRTIL 377          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHP_RABIT (Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctolagus cuniculus GN=ADH2-1 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.711e-36
Identity = 72/172 (41.86%), Postives = 109/172 (63.37%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+A  G + +GASRII +D+N  +F +AK  G T+ +NP++ +KPVQ VI EMTNGGVD +++C G  + M +  +C   GWG    VG+   D      P+ L+  RTLKGT FG +   + +P +V  Y N + +L+  +TH +PF +IN+A +L+  G+SIR ++
Sbjct:  207 GGVGLSAIMGCKTAGASRIIAIDINSDKFAKAKALGATDCLNPRELNKPVQDVIVEMTNGGVDFAIDCAGGSEVMKATVDCATVGWGSCTFVGVNLADKGLTISPIELILGRTLKGTNFGGWDAET-VPKLVSDYKNGKFDLDALVTHTLPFDKINEALNLLDQGKSIRTVL 377          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: FADH_PARDE (S-(hydroxymethyl)glutathione dehydrogenase OS=Paracoccus denitrificans GN=flhA PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.540e-36
Identity = 73/178 (41.01%), Postives = 111/178 (62.36%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTN------GGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G +GL   +G R++GA  IIGVDLN  +   A+ FG+T F+NPK+ +  VQ+++  +T       GG D S +CTG+V+ M  A EC H GWG ++++G+        T P  L+  R  KGT FG  + R+D+P +V+ YM+ ++E++  ITH +   +INK FDLM +GESIR ++
Sbjct:  197 GGIGLNVLQGLRLAGADMIIGVDLNDDKKPMAEHFGMTHFINPKNCENVVQEIV-NLTKTPFDQIGGADYSFDCTGNVKVMRDALECTHRGWGQSIIIGVAPAGAEISTRPFQLVTGRVWKGTAFGGARGRTDVPQIVDWYMDGKIEIDPMITHTLSLDDINKGFDLMHAGESIRSVV 373          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.540e-36
Identity = 74/179 (41.34%), Postives = 107/179 (59.78%), Query Frame = -2
Query:  321 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKP----VQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 845
            GAVGLA   GA+ +GA +I+G+DL  S+F  AK FG TE +NPK  + P     Q  + E  +GG D + EC G+V  M  A E  H GWGV+ ++G+        T P  L+  RT KGT FG +K    +P +V+ YMNK++ +++FITH     +IN AFD++  GES+R ++  +
Sbjct:  204 GAVGLAVIMGAKAAGAKKIVGIDLIESKFESAKFFGATECINPKSVELPEGKSFQAWLVEQFDGGFDYTFECIGNVHTMRQALEAAHKGWGVSCIIGVAGAGQEIATRPFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTAFDVLHKGESLRSVLAFE 382          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 4.624e-36
Identity = 73/173 (42.20%), Postives = 110/173 (63.58%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+A  G + +GASRIIG+D+N  +F +AK+ G TE VNP DY KP+ +V+ +MT+G GV+ S E  G    M +A    H+ +G +V+VG+P         P+ L   RT KG+ FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+L+ SG+SIR ++
Sbjct:  201 GGVGLSAVMGCKAAGASRIIGIDINKEKFPKAKELGATECVNPLDYKKPINEVLFDMTDGEGVEYSFEVIGRTDTMTAALASCHNNYGTSVIVGVPPSASQIAFDPLLLFTGRTWKGSVFGGWKSKDAVPRLVSDFMGKKFILDPLITHTMPFEKINEGFELLRSGKSIRTVL 373          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH1A_UROHA (Alcohol dehydrogenase 1A OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.997e-35
Identity = 72/173 (41.62%), Postives = 107/173 (61.85%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+A  G + +GASRIIGVD+N  +F +AK+ G TE VNP DY KP+ +V+ ++T G GVD S E  G    M +A    H  +G +++VGLP         P  +   RT KG+ FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+L+ +G+SIR ++
Sbjct:  201 GGVGLSAVMGCKAAGASRIIGVDINKDKFPKAKEMGATECVNPLDYKKPINEVLFDLTGGEGVDYSFEVIGRTDTMTAALASCHMDYGTSIIVGLPPSASEITFSPGLIFTGRTWKGSVFGGWKSKDSVPRLVSDFMQKKFSLDPLITHTMPFDKINEGFELLRAGKSIRSVL 373          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH7_MOUSE (Alcohol dehydrogenase class 4 mu/sigma chain OS=Mus musculus GN=Adh7 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.914e-35
Identity = 68/172 (39.53%), Postives = 107/172 (62.21%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+   G + +GASRIIG+D+N  +F +A   G TE ++PKD  KP+ +V+++MT   V  + E  G ++ M+ A    H  +G +V+VG P         PM L   RT KG  FG +K R D+P +V +++ K+ +L++ ITH +PF+ IN+ F+L+ SG+SIR ++
Sbjct:  201 GGVGLSVIMGCKAAGASRIIGIDINKDKFQKALAVGATECISPKDSTKPISEVLSDMTGNTVQYTFEVIGRLETMVDALSSCHMNYGTSVVVGAPPSAKMLTYDPMLLFTGRTWKGCVFGGWKSRDDVPKLVTEFLEKKFDLDQLITHTLPFNNINEGFELLYSGKSIRTVL 372          
BLAST of CN186366 vs. ExPASy Swiss-Prot
Match: ADH7_RAT (Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus GN=Adh7 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 67/172 (38.95%), Postives = 106/172 (61.63%), Query Frame = -2
Query:  330 GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGLPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 845
            G VGL+   G + +GASRIIG+D+N  +F +A   G TE +NP+D+ KP+ +V+++MT   V  + E  G ++ M+ A    H  +G +V+VG P         PM L   RT KG  FG +K R D+P +V +++ K+ +L + ITH +PF  I++ F+L+ SG+SIR ++
Sbjct:  201 GGVGLSVVMGCKAAGASRIIGIDINKDKFQKALDVGATECINPRDFTKPISEVLSDMTGNTVQYTFEVIGRLETMVDALSSCHMNYGTSVVVGAPPSAKMLSYDPMLLFTGRTWKGCVFGGWKSRDDVPKLVTEFLEKKFDLGQLITHTLPFHNISEGFELLYSGQSIRTVL 372          
The following BLAST results are available for this feature:
BLAST of CN186366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH1_APTAU3.202e-3743.02Alcohol dehydrogenase 1 OS=Apteryx australis GN=AD... [more]
ADH1_ANAPL4.182e-3742.44Alcohol dehydrogenase 1 (Fragment) OS=Anas platyrh... [more]
ADHQ_RABIT1.589e-3643.02Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctol... [more]
ADHP_RABIT2.711e-3641.86Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctol... [more]
FADH_PARDE3.540e-3641.01S-(hydroxymethyl)glutathione dehydrogenase OS=Para... [more]
ADHX_CAEEL3.540e-3641.34Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADH1B_UROHA4.624e-3642.20Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
ADH1A_UROHA2.997e-3541.62Alcohol dehydrogenase 1A OS=Uromastyx hardwickii P... [more]
ADH7_MOUSE3.914e-3539.53Alcohol dehydrogenase class 4 mu/sigma chain OS=Mu... [more]
ADH7_RAT5.112e-3538.95Alcohol dehydrogenase class 4 mu/sigma chain OS=Ra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002M15_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002M15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186366 ID=CN186366; Name=CN186366; organism=Citrus sinensis; type=EST; length=846bp
TTTTTTTTTTTTTTTTAGAAAGAAGATTTACACGAAAATCTTTATTACAT
AAGCTACAAAAAGAAGTACAGTAAGAAATAGGTAGAAAACACACCTCTTT
GTACGCCATATGCAGCAAGTCATCAAACAGAAAAACAAAAATAAAAAGGG
ACTGTAAGAAATATGTAGAAAACACAACTCTTTGAAAGCCATTCGCAGCA
AGTCATCAAACATACAGCATAAATTACTTATTCTCGGGGTAATATATAAC
TTGGAAAATTATGTGATCATCTTCATTCTGCCTCCATTAGATTGATCAGC
AACAGCAGACACATCTAACCATCCATGCGAATGATGCACCTAATGCTTTC
TCCCGAAAGCATGAGGTCAAATGCCTTGTTTATCTCCGAGAAGGGCACAG
CATGAGTGATGAATTTCTCAAGCTCCATCTCCTTGTTCATGTATTTTTCA
ACAACTGAAGGAAGATCAGAGCGAGGTTTGTAGTTGCCAAAGAAGGTACC
CTTAAGAGTCCTCTCATTAAGCAGATTCATGGGATGAGTCTTGAATGCAT
CATCTTTGTTTGGCAAACCCACAAGCACAGCAACACCCCAACCATCGTGA
ACGCATTCAAATGCTGAGATCATGGCCTGGACGCTTCCAGTACATTCAAC
ACTTCTATCCACTCCACCATTGGTCATTTCAGCAATCACCTGTTGAACAG
GTTTGTCATAATCTTTTGGATTCACAAACTCGGTAACCCCAAACTTCTTG
GCTTCATTGAATCTGCTTGGGTTCAAATCAACACCAATGATCCTGGAAGC
CCCTGATACTCTTGCCCCTTCGGCAGCAGCAAGGCCAACTGCACCC
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