CN186363
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EF1A_IGNH4 (Elongation factor 1-alpha OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=tuf PE=3 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 3.922e-82 Identity = 139/241 (57.68%), Postives = 189/241 (78.42%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEP--KRPSDKPLRLPLQDV 800 KEK H+N++VIGHVD GKST GHL+Y+LG +D++ ++ E+EA + K SFKYAW+LDKLK ERERG+TID+ KFET KYY T+IDAPGHRDFIKNMITG SQAD A+L++ + G FEAG+S +GQTREH LLA T+G+ Q+I NKMDAT P +S+ RY +IV+ + ++K +G+ +++PFVP+S + GDN+I+RS N+ WYKGPTL++ALDN+ P ++ + PLR+P+QDV Sbjct: 4 KEKPHMNLIVIGHVDHGKSTLVGHLLYELGFVDEKTLKMLEEEAKKRGKESFKYAWLLDKLKEERERGVTIDLTFMKFETPKYYFTIIDAPGHRDFIKNMITGASQADAAILVVSARPGEFEAGMSAEGQTREHILLAKTMGIDQIIVAVNKMDATEPPWSEKRYKQIVETLKKFMKGLGFKVDEIPFVPVSAWTGDNIIKRSENMPWYKGPTLVEALDNLKPPSVEKWAKLPLRIPIQDV 244
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EF1A_GIALA (Elongation factor 1-alpha (Fragment) OS=Giardia lamblia GN=TEF1 PE=2 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 3.922e-82 Identity = 147/222 (66.22%), Postives = 175/222 (78.83%), Query Frame = 3 Query: 138 STTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY-NPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDV 800 ST TGHLIYK GGID+R I+ +EK A EM K SFKYAWVLD+LK ERERGITI+IALWKFET KY T+IDAPGHRDFIKNMITGTSQAD A+L++ + G FEAGISKDGQTREHA LA TLG+K MI C NKMD KYSK RYDEI E+ LK +G+ E+ ++P SG+ GDN++E+S + WY+GP L+DA+D + PKRP+DKPLRLP+QDV Sbjct: 1 STLTGHLIYKCGGIDQRTIDEYEKRATEMGKGSFKYAWVLDQLKDERERGITINIALWKFETKKYIVTIIDAPGHRDFIKNMITGTSQADVAILVVAAGQGEFEAGISKDGQTREHATLANTLGIKTMIICVNKMDDGQVKYSKERYDEIKGEMMKQLKNIGWKKAEEFDYIPTSGWTGDNIMEKSDKMPWYEGPCLIDAIDGLKAPKRPTDKPLRLPIQDV 222
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EF1A_AERPE (Elongation factor 1-alpha OS=Aeropyrum pernix GN=tuf PE=3 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 4.337e-81 Identity = 134/238 (56.30%), Postives = 183/238 (76.89%), Query Frame = 3 Query: 87 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDV 800 EK H+N+VVIGHVD GKST GHL+Y+LG I+++ ++ E++A K SFK+AW+LDK+K ERERGITID+ KFET KY T+IDAPGHRDF+KNMITG SQAD A+L++ + G FEAG+S +GQTREH LLA T+G++Q+I NKMDA Y + RY+ +V + ++K +GY +K+PF+P+S ++GDN+IERS N+ WY GPTL++ALD + P +P DKPLR+P+Q+V Sbjct: 3 EKPHMNLVVIGHVDHGKSTLVGHLLYRLGYIEEKKLKELEEQAKSRGKESFKFAWILDKMKEERERGITIDLTFMKFETKKYVFTIIDAPGHRDFVKNMITGASQADAAILVVSARKGEFEAGMSTEGQTREHLLLARTMGIEQIIVAVNKMDAPDVNYDQKRYEFVVSVLKKFMKGLGYQVDKIPFIPVSAWKGDNLIERSPNMPWYNGPTLVEALDQLQPPAKPVDKPLRIPVQNV 240
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EF1A_THEPD (Elongation factor 1-alpha OS=Thermofilum pendens (strain Hrk 5) GN=tuf PE=3 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 4.200e-76 Identity = 134/242 (55.37%), Postives = 180/242 (74.38%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERS-TNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDV 800 M ++K H+N+VVIGH+D GKST G L+Y++G +D R+I+++E+EA +M + ++KYAWVLDKLK ERE+GITID+ +KFET KY+ T+IDAPGHRDF+KNMITG SQAD A+L++ + G FEAGIS GQTREH LA T+GV Q++ NKMD T YSK RY+EI ++ L+ VGY +++PF+P S +EG N+ +R+ WY GP L +A D EP RP DKPLR+P+QDV Sbjct: 1 MSEKKPHLNLVVIGHIDHGKSTLMGRLLYEIGAVDPRLIQQYEEEAKKMGRETWKYAWVLDKLKEEREKGITIDLGFYKFETKKYFFTLIDAPGHRDFVKNMITGASQADVALLVVSAKEGEFEAGISPAGQTREHVFLAKTMGVDQLVVAINKMD--TVNYSKERYEEIKNQLIRLLRMVGYKVDEIPFIPTSAWEGVNVSKRTPEKTPWYDGPCLYEAFDFFKEPPRPIDKPLRIPIQDV 240
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EF1A_RHYAM (Elongation factor 1-alpha (Fragment) OS=Rhynchosciara americana PE=2 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 2.305e-74 Identity = 142/201 (70.65%), Postives = 160/201 (79.60%), Query Frame = 3 Query: 234 SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTL------------LDALDNINEPKRPSDKPLRLPLQDV 800 SFKYAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P +S+ RY+EI KEVSSY+KK+GYNP V FVPISG+ GDNM+E S+N+ W KG + ALD I P RP+D+ LRLPL DV Sbjct: 2 SFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPFSENRYEEIKKEVSSYIKKIGYNPVAVAFVPISGWHGDNMLEPSSNMRWLKGWKVERINGNGEGKCGSXALDAILPPPRPTDQALRLPLPDV 202
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EF1A_METTP (Elongation factor 1-alpha OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=tuf PE=3 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 3.328e-73 Identity = 127/241 (52.70%), Postives = 172/241 (71.37%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDV 800 M K H+N+ IGHVD GKST G ++Y++G ID+ +IE++ KEAA K +F++AWV+D LK ERERG+TIDIA +F+T KYY TV+D PGHRDF+KNMITG SQAD AVL++ + G QT+EH LA TLGV Q+I NKMDAT P Y + RY+E+ +EV L+ VGY ++VPF+P+S + GDN+++ S WY GPT+LDAL+ + EP++P + PLR+P+QDV Sbjct: 1 MADTKPHLNLAFIGHVDHGKSTLVGRMMYEMGAIDEHIIEQYRKEAAAKGKATFEFAWVMDSLKEERERGVTIDIAHQRFDTDKYYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPDGVM-------AQTKEHVFLARTLGVNQLIVAINKMDATEPPYDEKRYNEVKEEVGKLLRMVGYKIDEVPFIPVSAYNGDNVVKHSDRTKWYTGPTVLDALNALKEPQKPVNLPLRIPVQDV 234
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EF1A_THEAC (Elongation factor 1-alpha OS=Thermoplasma acidophilum GN=tuf PE=3 SV=2) HSP 1 Score: 274.248 bits (700), Expect = 5.677e-73 Identity = 131/241 (54.36%), Postives = 176/241 (73.03%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDV 800 M +K H+N++ IGHVD GKST G L+Y+ G I +IE + KEA + K +F++AWV+D+ K ERERG+TID+A KFET KYY T+IDAPGHRDF+KNMITGTSQAD A+L+I + G G+ + QTREHA LA TLGV QM+ NKMDAT+P YS+ RY+E+ + L+ +G+ + + FVPISG++GDN+ + S N+ WYKGPTLL ALD P++P +KPLR+P++DV Sbjct: 1 MASQKPHLNLITIGHVDHGKSTLVGRLLYEHGEIPAHIIEEYRKEAEQKGKATFEFAWVMDRFKEERERGVTIDLAHRKFETDKYYFTLIDAPGHRDFVKNMITGTSQADAAILVISAREG---EGVME--QTREHAFLARTLGVPQMVVAINKMDATSPPYSEKRYNEVKADAEKLLRSIGF--KDISFVPISGYKGDNVTKPSPNMPWYKGPTLLQALDAFKVPEKPINKPLRIPVEDV 234
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EF1A_SULSO (Elongation factor 1-alpha OS=Sulfolobus solfataricus GN=tuf PE=1 SV=3) HSP 1 Score: 273.092 bits (697), Expect = 1.265e-72 Identity = 124/238 (52.10%), Postives = 173/238 (72.69%), Query Frame = 3 Query: 87 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDV 800 +K H+N++VIGH+D GKST G L+ G ID++ ++ E+ A ++ K S K+A++LD+LK ERERG+TI++ +FET KY+ T+IDAPGHRDF+KNMITG SQAD A+L++ + G +EAG+S +GQTREH +LA T+G+ Q+I NKMD T P Y + RY EIV +VS +++ G+N KV FVP+ GDN+ RS N+ WY GPTL + LD + P +P DKPLR+P+QDV Sbjct: 3 QKPHLNLIVIGHIDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLDRLKEERERGVTINLTFMRFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSVEGQTREHIILAKTMGLDQLIVAVNKMDLTEPPYDEKRYKEIVDQVSKFMRSYGFNTNKVRFVPVVAPAGDNITHRSENMKWYNGPTLEEYLDQLELPPKPVDKPLRIPIQDV 240
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EF1A_PICTO (Elongation factor 1-alpha OS=Picrophilus torridus GN=tuf PE=3 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.265e-72 Identity = 129/241 (53.53%), Postives = 179/241 (74.27%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDV 800 M EK H+N+V+IGHVD GKST G L+++ G I + +I+ ++KEA E K +F++AWV+D+ K ERERG+TID+ KFET KYY T+IDAPGHRDF+KNMITGTSQAD AVL++ + G G+ QT+EHA LA TLGV Q+I NKMDAT P YS+ R++E+ E++ L +G+ + VP +P+SG++GDN+++ S NL W+KGPTL++AL+ + P +P DKPLRLP++DV Sbjct: 1 MASEKPHMNLVIIGHVDHGKSTLVGRLLFEHGEIPQHIIDEYKKEAEEKGKATFEFAWVMDRFKEERERGVTIDLTHRKFETDKYYFTIIDAPGHRDFVKNMITGTSQADAAVLVVSAREG---EGVM--AQTKEHAFLARTLGVPQLIAVVNKMDATQPPYSEKRFNEVKDEITKLLTPIGF--KNVPIIPLSGYKGDNIMKPSPNLSWWKGPTLMEALNALQVPAKPVDKPLRLPVEDV 234
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EF1A_METMJ (Elongation factor 1-alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=tuf PE=3 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 6.277e-72 Identity = 128/241 (53.11%), Postives = 174/241 (72.20%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDV 800 M EK H+N+ VIGH+D GKSTT G L+++ G + +IE F KEA K SF++AWV+D LK ERERGITIDIA +F+T KYY TV+D PGHRDF+KNMITG SQAD A+L++ + G E QT+EH L+ TLG+ Q+I NKMDA KY + RY+E+ +++S LK VGY P+ + F+P+S F GDN+ ++S N WYKGPT+LDAL+ ++EP++P++ P+RLP+QDV Sbjct: 1 MAAEKPHMNLAVIGHIDHGKSTTVGRLLFETGTVPPHIIESFRKEAESKGKGSFEFAWVMDSLKEERERGITIDIAHKRFDTDKYYFTVVDCPGHRDFVKNMITGASQADAALLVVAAPDGVME-------QTKEHVFLSRTLGINQLIIGINKMDAA--KYDEKRYNEVKEQLSQLLKMVGYKPDDISFIPMSAFVGDNIAKKSENTPWYKGPTVLDALNALSEPEKPTNLPMRLPIQDV 232 The following BLAST results are available for this feature:
BLAST of CN186363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186363 ID=CN186363; Name=CN186363; organism=Citrus sinensis; type=EST; length=802bpback to top |