CN186363
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EF1A_METVA (Elongation factor 1-alpha OS=Methanococcus vannielii GN=tuf PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 9.084e-63 Identity = 121/244 (49.59%), Postives = 162/244 (66.39%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV-SSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDV 800 M K K +N+ IGHVD+GKSTT G L+ G ID ++I R KEA E K F++A+V+D LK ERERG+TID+A KF T KY T++D PGHRDFIKNMITG SQAD AVL+ +D G + QTREH L TLGV+Q+ NKMD T +S+A Y+E+ K + LK +G+NPE++ FVP++ GDN+ ++S WYKGPT+ + +D P++P++ PLRLP+QDV Sbjct: 1 MAKTKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVNVDDAKSGIQP------QTREHVFLIRTLGVRQLAVAVNKMD--TVNFSEADYNELKKMIGDQLLKMIGFNPEQINFVPVASLHGDNVFKKSERNPWYKGPTIAEVIDGFQPPEKPTNLPLRLPIQDV 236
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EF1A_METMP (Elongation factor 1-alpha OS=Methanococcus maripaludis GN=tuf PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.643e-62 Identity = 121/244 (49.59%), Postives = 160/244 (65.57%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV-SSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDV 800 M KEK +N+ IGHVD+GKSTT G L+ G ID ++I R KEA E K F++A+V+D LK ERERG+TID+A KF T KY T++D PGHRDFIKNMITG SQAD AVL+ +D G + QTREH L+ TLG+ Q+ NKMD T +S+A Y+E+ K + LK VG+NP+ + F+P++ GDN+ ++S N WY GPTL +D P++P+ PLRLP+QDV Sbjct: 1 MAKEKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVNVDDAKSGIQP------QTREHVFLSRTLGITQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPDNIDFIPVASLLGDNVFKKSENTPWYNGPTLAQVIDGFQPPEKPTTLPLRLPIQDV 236
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EF1A_METM5 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=tuf PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 3.452e-62 Identity = 120/244 (49.18%), Postives = 161/244 (65.98%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV-SSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDV 800 M KEK +N+ IGHVD+GKSTT G L+ G ID ++I R +KEA E K F++A+V+D LK ERERG+TID+A KF T KY T++D PGHRDFIKNMITG SQAD A+L+ +D G + QTREH L+ TLG+ Q+ NKMD T +S+A Y+E+ K + LK VG+NP+ + FVP++ GDN+ ++S WY GPTL + +D P++P+ PLRLP+QDV Sbjct: 1 MAKEKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLKKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAILVVNVDDAKSGIQP------QTREHVFLSRTLGISQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPDNITFVPVASLHGDNVFKKSDKTPWYNGPTLAEVIDAFQPPEKPTTLPLRLPIQDV 236
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EF1A_METM7 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=tuf PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 4.508e-62 Identity = 120/244 (49.18%), Postives = 160/244 (65.57%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV-SSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDV 800 M KEK +N+ IGHVD+GKSTT G L+ G ID ++I R KEA E K F++A+V+D LK ERERG+TID+A KF T KY T++D PGHRDFIKNMITG SQAD A+L+ +D G + QTREH L+ TLG+ Q+ NKMD T +S+A Y+E+ K + LK VG+NP+ + FVP++ GDN+ ++S WY GPTL + +D P++P+ PLRLP+QDV Sbjct: 1 MAKEKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAILVVNVDDAKSGIQP------QTREHVFLSRTLGISQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPDNITFVPVASLHGDNVFKKSDKTPWYNGPTLAEVIDAFQPPEKPTTLPLRLPIQDV 236
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EF1A_METM6 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=tuf PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.004e-61 Identity = 120/244 (49.18%), Postives = 159/244 (65.16%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV-SSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDV 800 M KEK +N+ IGHVD+GKSTT G L+ G ID ++I R KEA E K F++A+V+D LK ERERG+TID+A KF T KY T++D PGHRDFIKNMITG SQAD A+L+ +D G + QTREH L+ TLG+ Q+ NKMD T +S+A Y+E+ K + LK VG+NP + FVP++ GDN+ ++S WY GPTL + +D P++P+ PLRLP+QDV Sbjct: 1 MAKEKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAILVVNVDDAKSGIQP------QTREHVFLSRTLGISQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPANITFVPVASLHGDNVFKKSDRTPWYNGPTLAEVIDAFQPPEKPTTLPLRLPIQDV 236
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EF1A_METST (Elongation factor 1-alpha OS=Methanosphaera stadtmanae (strain DSM 3091) GN=tuf PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.922e-61 Identity = 119/241 (49.38%), Postives = 160/241 (66.39%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDV 800 M KEKTH+N+ IGHVD GKST GHL+ G I ++ ++ E K+ +V+DKL ERERG+TID+A KFET KY TV+D PGHRDF+KNMITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMD YS+ +++E+ +E+ + + VG+ P VPF+P+S FEGDN+ E+S+N WYKG TL+ LD ++EP +P D PLRLP+QDV Sbjct: 1 MAKEKTHMNLAFIGHVDHGKSTLVGHLLLLEGAIAEQQLDEGED----------KFRFVMDKLGEERERGVTIDLAHAKFETQKYEYTVVDCPGHRDFVKNMITGASQADAAVLVVAANDGIMP-------QTKEHIFLSRTLGINQLIIAINKMDVVD--YSEDKFNELKEELGALISTVGFKPSDVPFIPVSAFEGDNISEKSSNTPWYKGNTLVQELDALDEPDKPVDLPLRLPIQDV 222
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EF1A_METS3 (Elongation factor 1-alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=tuf PE=3 SV=2) HSP 1 Score: 233.417 bits (594), Expect = 1.110e-60 Identity = 118/241 (48.96%), Postives = 157/241 (65.15%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDV 800 M K K HIN+ IGHVD GKST GHL+ K G I ++ ++ E K+ +V+DKL ERERG+TID+A KF T KY TV+D PGHRDF+KNMITG SQAD VL++ + G QT+EH L+ TLG+ Q+I NK+D Y +A+++E+ EVS+ +K VG+NP VPF+P+S FEGDN+ + S N WYKG TL+ ALDN+ P++P PLR+P+QDV Sbjct: 1 MAKTKEHINLAFIGHVDHGKSTLVGHLLLKAGAIAEQQLDDGEN----------KFRFVMDKLGEERERGVTIDLAHQKFSTKKYDYTVVDCPGHRDFVKNMITGASQADAGVLVVAADDGVMP-------QTKEHVFLSKTLGINQLIVAINKIDLVD--YDEAKFNELKDEVSALIKTVGFNPADVPFIPVSAFEGDNIKDASPNTSWYKGDTLMQALDNLAAPEKPVSLPLRIPIQDV 222
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EF1A_HALSA (Elongation factor 1-alpha OS=Halobacterium salinarium GN=tuf PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 5.511e-60 Identity = 114/238 (47.90%), Postives = 157/238 (65.97%), Query Frame = 3 Query: 87 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDV 800 + H N+ VIGHVD GKST G L+Y+ G + + VIE+ ++EA E K F++A+V+D L ERERG+TIDIA +F T +Y T++D PGHRDF+KNMITG SQAD AVL++ + G QTREH L+ TLG+ ++I NKMD Y +++Y+E+V V +VG+NP+ F+ S FEGDN+ + S N WY GPTLL+AL+ + P+ P+D LRLP+QDV Sbjct: 3 DNRHQNLAVIGHVDHGKSTMVGRLLYETGSVPEHVIEQHKEEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFTTDEYEFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDG-------VAPQTREHVFLSRTLGIDELIVAVNKMDVV--DYDESKYNEVVSGVKDLFGQVGFNPDDAKFIATSAFEGDNVSDHSDNTPWYDGPTLLEALNGLPVPQPPTDADLRLPIQDV 231
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EF1A_HALS3 (Elongation factor 1-alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=tuf PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 5.511e-60 Identity = 114/238 (47.90%), Postives = 157/238 (65.97%), Query Frame = 3 Query: 87 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDV 800 + H N+ VIGHVD GKST G L+Y+ G + + VIE+ ++EA E K F++A+V+D L ERERG+TIDIA +F T +Y T++D PGHRDF+KNMITG SQAD AVL++ + G QTREH L+ TLG+ ++I NKMD Y +++Y+E+V V +VG+NP+ F+ S FEGDN+ + S N WY GPTLL+AL+ + P+ P+D LRLP+QDV Sbjct: 3 DNRHQNLAVIGHVDHGKSTMVGRLLYETGSVPEHVIEQHKEEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFTTDEYEFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDG-------VAPQTREHVFLSRTLGIDELIVAVNKMDVV--DYDESKYNEVVSGVKDLFGQVGFNPDDAKFIATSAFEGDNVSDHSDNTPWYDGPTLLEALNGLPVPQPPTDADLRLPIQDV 231
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: ERF3A_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus GN=Gspt1 PE=1 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.228e-59 Identity = 112/238 (47.06%), Postives = 158/238 (66.39%), Query Frame = 3 Query: 87 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEK-VPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQD 797 +K H+N+V IGHVD+GKST G ++Y G +DKR +E++E+EA E N+ ++ +W LD + ER++G T+++ FET K + T++DAPGH+ F+ NMI G SQAD AVL+I + G FE G K GQTREHA+LA T GVK +I NKMD T +S RY+E +++ +LKKVG+NP+K + F+P SG G N+ E+S WY G + LDN+ R D P+RLP+ D Sbjct: 71 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYLDNLPNFNRSVDGPIRLPIVD 308 The following BLAST results are available for this feature:
BLAST of CN186363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186363 ID=CN186363; Name=CN186363; organism=Citrus sinensis; type=EST; length=802bpback to top |