CN186363

Overview
NameCN186363
Unique NameCN186363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: CYSN_AGRRK (Sulfate adenylyltransferase subunit 1 OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=cysN PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.852e-29
Identity = 73/217 (33.64%), Postives = 119/217 (54.84%), Query Frame = 3
Query:   99 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAA-EMNKRSFK-YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMI-ERSTNLDWYKGPTLLDALD 740
            + ++  G VD GKST  G L++    + +      ++++  + N      +A +LD L+AERE+GITID+A   F T      V D PGH  + +NM TG S AD A+L+ID+  G  E       QTR HA +A  LG+KQ +   NK+D T   Y +A +++I  +   +   +G   +++  +P+S  +G+N++      + WY GPTL++ L+
Sbjct:   27 LRLITCGSVDDGKSTLIGRLLWDTKAVKEDQAATLQRDSTGKQNDLGLPDFALLLDGLQAEREQGITIDVAYRYFSTDNRSFIVADTPGHEQYTRNMATGASTADLAILLIDARLGILE-------QTRRHATIASLLGIKQFVLAVNKIDLT--NYDRAGFEKIAHDFREFALSLGV--KQITAIPMSALKGENVVYSGQAAMPWYNGPTLVETLE 232          
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: CYSN_FRATW (Sulfate adenylyltransferase subunit 1 OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=cysN PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.571e-29
Identity = 86/247 (34.82%), Postives = 127/247 (51.42%), Query Frame = 3
Query:   84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVG-YNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQ 794
            ++K  +  +  G VD GKST  G L++     D ++I  FE + A +   S K          A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +   LG+K +I   NKMD  T  YS+  Y  I  E   YLK  G      + FVPIS  +GDN++ +S  + W++G  L+  L+ I      +D+  R P+Q
Sbjct:   20 QQKELLRFITCGSVDDGKSTLMGRLLH-----DSKLI--FEDQLASIVADSKKVGTQGDRLDLALLVDGLQSEREQGITIDVAYRYFSTDKRKFIIADTPGHEQYTRNMATGASNCDLAIILIDARKG-------LQTQTRRHSFICSLLGIKHVIVAVNKMD--TVGYSQQIYKSIQDE---YLKLAGSLQIPDIRFVPISALDGDNVVSKSPKMPWFRGSPLMHYLETIKIDYAYTDE-FRFPVQ 246          
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_CORK4 (Elongation factor Tu OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=tuf PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.582e-29
Identity = 91/243 (37.45%), Postives = 132/243 (54.32%), Query Frame = 3
Query:   84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDV 800
            + K H+NI  IGHVD GK+TTT         I K + E++ +E      ++F +   +DK   E+ERGITI+IA  ++ T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   + +  EV   L +  ++ E  P V IS     EGD   E+S  LD      L+DA D +I +P R +DKP  +P++D+
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTTTA-------AITKVLSEKYPEE-----NQAFAFD-AIDKAPEEKERGITINIAHVEYSTPKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKCDMVD---DEDLIELVEMEVRELLAEQDFD-EDAPIVHISALKALEGDEKWEQSI-LD------LMDACDESIPDPVRETDKPFLMPIEDI 219          
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_ARTS2 (Elongation factor Tu OS=Arthrobacter sp. (strain FB24) GN=tuf PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.121e-28
Identity = 86/244 (35.25%), Postives = 126/244 (51.64%), Query Frame = 3
Query:   84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDV 800
            + K H+NI  IGHVD GK+T T  +   L          ++K      KR F     +D    ER+RGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   D +  EV   L   G++ ++ P V +SG    EGD         +W K    L+ A+D ++ +P R  DKP  +P++DV
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTAAISKVL----------YDKYPTLNEKRDFAS---IDSAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPYLLVALNKADMVD---DEELLDLVEMEVRELLSSQGFDGDEAPVVRVSGLKALEGDP--------EWVKSVEDLMAAVDESVPDPVRDRDKPFLMPIEDV 220          
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: CYSN_FRATT (Sulfate adenylyltransferase subunit 1 OS=Francisella tularensis subsp. tularensis GN=cysN PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.464e-28
Identity = 86/247 (34.82%), Postives = 126/247 (51.01%), Query Frame = 3
Query:   84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVG-YNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQ 794
            ++K  +  +  G VD GKST  G L++     D ++I  FE + A +   S K          A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H  +   LG+K +I   NKMD  T  YS+  Y  I  E   YLK  G      + FVPIS  +GDN++ +S  + W++G  L+  L+ I      +D+  R P+Q
Sbjct:   20 QQKELLRFITCGSVDDGKSTLIGRLLH-----DSKLI--FEDQLASIVADSKKVGTQGDRLDLALLVDGLQSEREQGITIDVAYRYFSTDKRKFIIADTPGHEQYTRNMATGASNCDLAIILIDARKG-------LQTQTRRHNFICSLLGIKHVIVAVNKMD--TVGYSQQIYKSIQDE---YLKLAGSLQIPDIRFVPISALDGDNVVSKSPKMPWFRGSPLMHYLETIKIDYAYTDE-FRFPVQ 246          
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: CYSN_FRAT1 (Sulfate adenylyltransferase subunit 1 OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=cysN PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.464e-28
Identity = 86/247 (34.82%), Postives = 126/247 (51.01%), Query Frame = 3
Query:   84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVG-YNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQ 794
            ++K  +  +  G VD GKST  G L++     D ++I  FE + A +   S K          A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H  +   LG+K +I   NKMD  T  YS+  Y  I  E   YLK  G      + FVPIS  +GDN++ +S  + W++G  L+  L+ I      +D+  R P+Q
Sbjct:   20 QQKELLRFITCGSVDDGKSTLIGRLLH-----DSKLI--FEDQLASIVADSKKVGTQGDRLDLALLVDGLQSEREQGITIDVAYRYFSTDKRKFIIADTPGHEQYTRNMATGASNCDLAIILIDARKG-------LQTQTRRHNFICSLLGIKHVIVAVNKMD--TVGYSQQIYKSIQDE---YLKLAGSLQIPDIRFVPISALDGDNVVSKSPKMPWFRGSPLMHYLETIKIDYAYTDE-FRFPVQ 246          
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_METI4 (Elongation factor Tu OS=Methylacidiphilum infernorum (isolate V4) GN=tuf PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.912e-28
Identity = 85/244 (34.84%), Postives = 129/244 (52.87%), Query Frame = 3
Query:   84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAW-VLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800
            ++K HIN+  IGHVD GK+T T  + Y L           +K  A+      K A+  +DK   E+ERGITI+ A  ++E+ K +   +D PGH D+IKNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK+D       K   + +  EV   L + G+  +K+P +    +   EGD   E++          L++A+DN I  P+RP D+P  +P++DV
Sbjct:    8 RKKPHINVGTIGHVDHGKTTLTSAITYVLA----------KKGLAQ------KMAYDQIDKAPEEKERGITINTAHVEYESDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMVD---DKELLELVELEVRELLNQYGFPGDKIPIIKGSALKALEGDPEYEKNI-------LELVEAMDNYIPIPERPKDQPFLMPIEDV 218          
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_TROWT (Elongation factor Tu OS=Tropheryma whipplei (strain Twist) GN=tuf PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.497e-28
Identity = 87/248 (35.08%), Postives = 123/248 (49.60%), Query Frame = 3
Query:   84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFE--------GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDV 800
            + K H+NI  IGHVD GK+T T              I R   E    N    +    +D    ER+RGITI+I+  ++ET K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D      S     E+V+ EV   L   G++ E VP V +SG +        GD ++E    +D           ++I +P R  DKP  +P++DV
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTA------------AISRVLSERLPSNTNVKQDFDAIDSAPEERQRGITINISHIEYETEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGAM-------AQTREHVLLAKQVGVPYLLVALNKADMV----SDEEILELVELEVRELLSNHGFDGENVPVVRVSGLKALEGDQKWGDAVMELMKAVD-----------ESIPDPVRDRDKPFLMPIEDV 221          
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_ARTCA (Elongation factor Tu OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=tuf PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.497e-28
Identity = 86/244 (35.25%), Postives = 126/244 (51.64%), Query Frame = 3
Query:   84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDV 800
            + K H+NI  IGHVD GK+T T  +   L          ++K      KR F     +D    ER+RGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   D +  EV   L   G++ ++ P V +SG    EGD +        W K    L+ A+D ++ +P R  DKP  +P++DV
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTAAISKVL----------YDKYPDLNEKRDFAS---IDSAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPYLLVALNKSDMVD---DEELLDLVEMEVRELLSSQGFDGDEAPVVRVSGLKALEGDPV--------WVKSVEDLMAAVDESVPDPVRDRDKPFLMPIEDV 220          
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_TROW8 (Elongation factor Tu OS=Tropheryma whipplei (strain TW08/27) GN=tuf PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.261e-28
Identity = 87/248 (35.08%), Postives = 123/248 (49.60%), Query Frame = 3
Query:   84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFE--------GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDV 800
            + K H+NI  IGHVD GK+T T              I R   E    N    +    +D    ER+RGITI+I+  ++ET K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D      S     E+V+ EV   L   G++ E VP V +SG +        GD ++E    +D           ++I +P R  DKP  +P++DV
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTA------------AISRVLSERLPSNTNVKQDFDAIDSAPEERQRGITINISHIEYETEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGAM-------AQTREHVLLAKQVGVPYLLVALNKADMV----SDEEILELVELEVRELLSTHGFDGENVPVVRVSGLKALEGDQKWGDAVMELMKAVD-----------ESIPDPVRDRDKPFLMPIEDV 221          
The following BLAST results are available for this feature:
BLAST of CN186363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSN_AGRRK3.852e-2933.64Sulfate adenylyltransferase subunit 1 OS=Agrobacte... [more]
CYSN_FRATW6.571e-2934.82Sulfate adenylyltransferase subunit 1 OS=Francisel... [more]
EFTU_CORK48.582e-2937.45Elongation factor Tu OS=Corynebacterium kroppenste... [more]
EFTU_ARTS21.121e-2835.25Elongation factor Tu OS=Arthrobacter sp. (strain F... [more]
CYSN_FRATT1.464e-2834.82Sulfate adenylyltransferase subunit 1 OS=Francisel... [more]
CYSN_FRAT11.464e-2834.82Sulfate adenylyltransferase subunit 1 OS=Francisel... [more]
EFTU_METI41.912e-2834.84Elongation factor Tu OS=Methylacidiphilum infernor... [more]
EFTU_TROWT2.497e-2835.08Elongation factor Tu OS=Tropheryma whipplei (strai... [more]
EFTU_ARTCA2.497e-2835.25Elongation factor Tu OS=Arthrobacter chlorophenoli... [more]
EFTU_TROW83.261e-2835.08Elongation factor Tu OS=Tropheryma whipplei (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002M13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002M13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186363 ID=CN186363; Name=CN186363; organism=Citrus sinensis; type=EST; length=802bp
GCGGTTTTCCGAAGGGCGGCGAGAGAGAACCATTTTCGCGAATATCATTT
TAATAAGGTTTTTTCTAGATTTGCCTAATGGGTAAGGAGAAGACTCACAT
CAACATTGTGGTCATCGGCCATGTCGACTCTGGAAAGTCGACCACCACCG
GACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGG
TTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAATACGCCTG
GGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATA
TTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTCATTGAT
GCTCCCGGACATCGTGACTTTATCAAGAACATGATTACCGGTACCTCACA
GGCTGACTGTGCTGTCCTCATCATTGACTCTACCACTGGTGGTTTTGAAG
CTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTC
ACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCAC
CACCCCCAAGTATTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCT
CTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTG
CCCATCTCTGGTTTCGAGGGTGACAACATGATTGAGAGGTCTACCAACCT
TGACTGGTACAAGGGTCCAACCCTGCTGGACGCTCTTGACAATATCAATG
AGCCGAAGAGGCCCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGTG
TA
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