CN186363
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_SCHPO (Elongation factor Tu, mitochondrial OS=Schizosaccharomyces pombe GN=tuf1 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.408e-25 Identity = 77/240 (32.08%), Postives = 121/240 (50.42%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 ++K H+NI IGHVD GK+T T + K +++ + SF +DK E+ RGITI A ++ET + +D PGH D+IKNMITG + D A++++ +T G QTREH LLA +GVKQ++ NK+D P + + E+ L + G++ + P V SG + R + L++A+D+ I P+R +D P + ++DV Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTAAIT---------------KCLSDLGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP-------QTREHLLLARQVGVKQIVVYINKVDMVEPD----MIELVEMEMRELLSEYGFDGDNTPIV--SGSALCALEGREPEIGLNSITKLMEAVDSYITLPERKTDVPFLMAIEDV 260
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_PLARO (Elongation factor Tu OS=Planobispora rosea GN=tuf PE=3 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 4.408e-25 Identity = 83/241 (34.44%), Postives = 124/241 (51.45%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRS-FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDV 800 + K H+NI IGH+D GK+T T I K + +R+ E+NK + F +DK E+ RGITI IA +++T K + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + V+E+ S + G + V + EGD S L++A+D NI EP R +DKP +P++DV Sbjct: 8 RTKPHMNIGTIGHIDHGKTTLTA-------AITKVLHDRYP----ELNKATPFDK---IDKAPEEKARGITISIAHVEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVDDEEILELVELEVRELLSAQEFPGDDLPVVRVSALKALEGDEKWADSI-------IELMNAVDENIPEPPRDTDKPFLMPIEDV 220
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_MYCTU (Elongation factor Tu OS=Mycobacterium tuberculosis GN=tuf PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.408e-25 Identity = 86/243 (35.39%), Postives = 127/243 (52.26%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD S L++A+D +I +P R +DKP +P++DV Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGDAKWVASVE-------ELMNAVDESIPDPVRETDKPFLMPVEDV 219
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_MYCTA (Elongation factor Tu OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=tuf PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.408e-25 Identity = 86/243 (35.39%), Postives = 127/243 (52.26%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD S L++A+D +I +P R +DKP +P++DV Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGDAKWVASVE-------ELMNAVDESIPDPVRETDKPFLMPVEDV 219
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_MYCBT (Elongation factor Tu OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=tuf PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.408e-25 Identity = 86/243 (35.39%), Postives = 127/243 (52.26%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD S L++A+D +I +P R +DKP +P++DV Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGDAKWVASVE-------ELMNAVDESIPDPVRETDKPFLMPVEDV 219
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_MYCBP (Elongation factor Tu OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=tuf PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.408e-25 Identity = 86/243 (35.39%), Postives = 127/243 (52.26%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD S L++A+D +I +P R +DKP +P++DV Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGDAKWVASVE-------ELMNAVDESIPDPVRETDKPFLMPVEDV 219
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_MYCBO (Elongation factor Tu OS=Mycobacterium bovis GN=tuf PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.408e-25 Identity = 86/243 (35.39%), Postives = 127/243 (52.26%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD S L++A+D +I +P R +DKP +P++DV Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGDAKWVASVE-------ELMNAVDESIPDPVRETDKPFLMPVEDV 219
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_MYCA9 (Elongation factor Tu OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=tuf PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.408e-25 Identity = 82/243 (33.74%), Postives = 125/243 (51.44%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE--KEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T I K + +++ EA+ ++ +D E+ RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + V+E+ S G N V + EGD +W K L+DA+D +I +P R ++KP +P++DV Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYPDLNEASAFDQ--------IDNAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDMVDDEELLELVEMEVRELLSSQDFDGDNAPVVRVSALKALEGD--------AEWGKTVADLMDAVDESIPDPVRETEKPFLMPVEDV 220
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU1_STRAW (Elongation factor Tu 1 OS=Streptomyces avermitilis GN=tuf1 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.408e-25 Identity = 80/245 (32.65%), Postives = 124/245 (50.61%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE--KEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDV 800 + K H+NI IGH+D GK+T T I K + + + EA+ ++ +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + V+E+ S + G + V + EGD +W G ++LD + +NI +P+R DKP +P++DV Sbjct: 8 RTKPHVNIGTIGHIDHGKTTLTA-------AITKVLHDAYPDLNEASAFDQ--------IDKAPEERQRGITISIAHVEYQTETRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVDDEEILELVELEVRELLSEYEFPGDDLPVVKVSALKALEGDK--------EW--GQSVLDLMKAVDENIPQPERDVDKPFLMPIEDV 220
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_SYNJA (Elongation factor Tu OS=Synechococcus sp. (strain JA-3-3Ab) GN=tuf PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.756e-25 Identity = 72/246 (29.27%), Postives = 122/246 (49.59%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGP------TLLDALDN-INEPKRPSDKPLRLPLQDV 800 + K H+N+ IGHVD GK+T T + L + + +R+++ +D ER RGITI+ A +++T K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + + + E+ L K + +++P + S + ++ + + P L+DA+D+ I P+R DKP + ++DV Sbjct: 8 RTKPHVNVGTIGHVDHGKTTLTAAITMTLAALGQATAKRYDE---------------IDAAPEERARGITINTAHVEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPSLVVFLNKVDMVD---DEELLELVELEIRELLSKYDFPGDEIPIIRGSALKALERMQANPKTQRGEDPWVDKIYELMDAVDSYIPTPERDVDKPFLMAVEDV 228 The following BLAST results are available for this feature:
BLAST of CN186363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186363 ID=CN186363; Name=CN186363; organism=Citrus sinensis; type=EST; length=802bpback to top |