CN186353

Overview
NameCN186353
Unique NameCN186353
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: UGL_BURA4 (Ureidoglycolate lyase OS=Burkholderia ambifaria (strain MC40-6) GN=BamMC406_5393 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.195e-39
Identity = 93/203 (45.81%), Postives = 118/203 (58.13%), Query Frame = 2
Query:   71 KIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG------PV--KVGQKITAGITGL 652
            K + +G NYA HA E G  VPKEPV+F K TSS  G    I++P        EVEL VVIG   +DV E  A+DYV GY V  D++ RE Q      G  W   KG DTF PI   ++ +  VPDP  ++LWL +DG   Q G+T+ M+F +  L++++S+ MTL  GDVI TGTP GVG      PV  K GQ +  GI GL
Sbjct:   72 KFIGIGLNYADHAAEAGMPVPKEPVVFGKWTSSICGPNDGIDIPKGSVKTDWEVELGVVIGTTCKDVDEARALDYVAGYCVVNDVSEREWQI---ERGGQWDKGKGFDTFGPIGPWLVTRDEVPDPQRVDLWLEIDGHRYQNGNTRTMVFTVAQLVAYLSTCMTLQPGDVITTGTPPGVGMGIKPSPVFLKAGQTVRLGIDGL 271          
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: HPCE_ECOLX (Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase OS=Escherichia coli GN=hpcE PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.057e-38
Identity = 84/194 (43.30%), Postives = 125/194 (64.43%), Query Frame = 2
Query:   74 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTP-ISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGL 652
            + A+G NYA HA EL    P+EP++FLK  ++  G+  T   P+ ++ +H+E EL VVIG++AR+V E  AMDYV GY V  D   R+   +     L     K +D  TP +S+++PK A+PDPHNL L   V+GE+RQ+G+T D+IF +P+LI+++S  MTL  GD+I TGTP+G+    VG ++   + G+
Sbjct:  225 LFALGLNYADHASELEFKPPEEPLVFLKAPNTLTGDNQTSVRPNNIEYMHYEAELVVVIGKQARNVSEADAMDYVAGYTVCNDYAIRDYLENYYRPNLR---VKSRDGLTPMLSTIVPKEAIPDPHNLTLRTFVNGELRQQGTTADLIFSVPFLIAYLSEFMTLNPGDMIATGTPKGLS--DVGDEVVVEVEGV 413          

HSP 2 Score: 77.0258 bits (188), Expect = 1.177e-13
Identity = 54/169 (31.95%), Postives = 85/169 (50.30%), Query Frame = 2
Query:  125 AVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKI 631
            A PK  V F+KP ++ +G G  I  P   ++L     +A+++G+ A  V E  A +Y+ GYA+A D++  E     +S   P   AK +D F PI   +  S V    NL ++  ++G      +T D+      L+S +S   TL  GD IL GTPQ    ++ G ++
Sbjct:   30 APPKTAVWFIKPRNTVIGCGEPIPFPQG-ENLLSGATVALIVGKTATKVREEDAAEYIAGYALANDVSLPE-----ESFYRPAIKAKCRDGFCPIGETVALSNVD---NLTIYTEINGRPADHWNTSDLQRNAAQLLSALSEFATLNPGDAILLGTPQARVEIQPGDRV 189          
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: FMP41_YEAST (Uncharacterized mitochondrial hydrolase FMP41 OS=Saccharomyces cerevisiae GN=FMP41 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.057e-38
Identity = 91/249 (36.55%), Postives = 142/249 (57.03%), Query Frame = 2
Query:   56 IQAGTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLG-------------------------NGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETT---AMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPD-PHNLE----LWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGI----TGLLDVHFDIEKRRRP 691
            ++A  KI+ +GRNYAAH KEL N+ PK+P  FLKPTSS +                          N G I +P  +  +HHE+ELA+++ +   +V +       D + G A+ALD+TAR +Q  AK  GLPWT++KG DTF PIS+++ +        NL+    +  +V+G++RQ G T  M+  +  ++ HIS++++L  GD+ILTGTP GVG +K G ++   +      ++D++F+ E R  P
Sbjct:    6 LKAARKIICIGRNYAAHIKELNNSTPKQPFFFLKPTSSIVTPLSSSLVKTTRPANSTFNGLNEDGTNPGPIFIPRGV-KVHHEIELALIVSKHLSNVTKMKPEEVYDSISGVALALDLTARNVQDEAKKKGLPWTISKGFDTFMPISAIVSREKFSSYKSNLQDIFRVKCSVNGQLRQDGGTNLMLHPLHKILQHISTMISLEPGDIILTGTPAGVGELKPGDRVHCELLQNNDNIVDMNFECENRPGP 253          
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: Y2225_ARCFU (Uncharacterized protein AF_2225 OS=Archaeoglobus fulgidus GN=AF_2225 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.799e-37
Identity = 85/192 (44.27%), Postives = 122/192 (63.54%), Query Frame = 2
Query:   68 TKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGI 643
            +KI+AVG NY  HA+EL   VP+EP+LF+KP+++ +G+   I +P     + +E ELAVVI +  R+VPET A DY+ GY    D+TAR++Q  AK     WT AK  DTF P+   +  + + DP  L +   V+G++ QK +T ++IF +  L+S +SS+MTL  GDVI TGTP GVG +K G  +   I
Sbjct:   44 SKIIAVGLNYIDHAEELNMPVPEEPILFMKPSTAVIGHDDCIILPQISQRVDYEGELAVVIAEDCRNVPETNAADYILGYTCFNDVTARDLQ--AKDG--QWTRAKSFDTFAPLGPYI--AEIDDPSKLGIQTRVNGKVVQKSNTSNLIFDVFQLVSFVSSVMTLKAGDVIATGTPAGVGMLKDGDVVEVEI 229          
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: HPAG_SALDU (4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase OS=Salmonella dublin GN=hpaG PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.799e-37
Identity = 85/200 (42.50%), Postives = 121/200 (60.50%), Query Frame = 2
Query:   56 IQAGTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGL 652
            + A   + A+G NYA HA EL    PKEP++F+K  +++  +  T   P+ ++ +H+E EL VVIG+ AR V E  AM+YV GY V  D   R+   +     L     K +D  TPI   ++ K AV DPHNL L   V+GE+RQ+G+T D+IF IP+LIS++S  MTL  GD+I TGTP+G+  V  G ++   I G+
Sbjct:  219 LSATGTLFALGLNYADHASELAFTPPKEPLVFIKAPNTFTEHHQTSVRPNNVEYMHYEAELVVVIGKTARKVSEAEAMEYVAGYTVCNDYAIRDYLENYYRPNLR---VKSRDGLTPIGPWIVDKEAVSDPHNLTLRTFVNGELRQEGTTADLIFSIPFLISYLSEFMTLQPGDMIATGTPKGLSDVVPGDEVVLEIKGV 415          

HSP 2 Score: 71.2478 bits (173), Expect = 6.456e-12
Identity = 52/177 (29.38%), Postives = 83/177 (46.89%), Query Frame = 2
Query:  122 NAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGL 652
            NA PK  V F+KP ++ + +G  I  P   + +     +A+++G+ A       A +Y+ GYA+A      E+    +S   P   AK +D F P+  + P S   D  NL +   ++G      +T D+      L+S +S   TL  GD IL GTPQ    ++ G ++     GL
Sbjct:   29 NAPPKTAVWFIKPRNTVIRHGEPILYPQG-EKVLSGATVALIVGKTASRKRSEAAAEYIAGYALA-----NEVSLPEESFYRPAIKAKCRDGFCPLGEMAPLS---DVDNLTIITEINGREADHWNTADLQRSAAQLLSALSEFATLNPGDAILLGTPQNRVALRPGDRVRILAKGL 196          
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: FAH2A_HUMAN (Fumarylacetoacetate hydrolase domain-containing protein 2A OS=Homo sapiens GN=FAHD2A PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.209e-34
Identity = 79/180 (43.89%), Postives = 111/180 (61.67%), Query Frame = 2
Query:   71 KIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPIS-SVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            K+V VG NY  H KE    VPKEP++F K  SS +G    + +P     +  EVELAVVIG+K + +  T AM +V G+ VA D++AR+ Q   +  G  W + K  DTF P+  +++ K +V DPHNL++   V+GE+ Q G+T  M+F    LI+ +S  +T + GDVILTGTP GVG
Sbjct:  107 KVVCVGMNYVDHCKEQNVPVPKEPIIFSKFASSIVGPYDEVVLPPQSQEVDWEVELAVVIGKKGKHIKATDAMAHVAGFTVAHDVSARDWQ--MRRNGKQWLLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSGNTNQMVFKTEDLIAWVSQFVTFYPGDVILTGTPPGVG 284          
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: FAHD2_BOVIN (Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Bos taurus GN=FAHD2 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.837e-34
Identity = 77/180 (42.78%), Postives = 111/180 (61.67%), Query Frame = 2
Query:   71 KIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPIS-SVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            K+V VG NYA H +E    VPKEP++F K  S+ +G    I +P     +  EVELAVVIG++ + +  T AM +V G+ VA D++AR+ Q      G  W + K  DTF P+  +++ K +V DPHNL++   V+GE+ Q  +T  M+F    LI+ +S  +TL+ GD+ILTGTP GVG
Sbjct:  107 KVVCVGMNYADHCREQNVPVPKEPIIFSKFASAIVGPYDNIILPPESQEVDWEVELAVVIGKRGKYIKATDAMAHVAGFTVAHDVSARDWQMGRN--GKQWLLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGELMQSSNTNQMVFKTEELITWVSQFVTLYPGDIILTGTPPGVG 284          
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: FAH2B_HUMAN (Fumarylacetoacetate hydrolase domain-containing protein 2B OS=Homo sapiens GN=FAHD2B PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.280e-33
Identity = 77/180 (42.78%), Postives = 110/180 (61.11%), Query Frame = 2
Query:   71 KIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPIS-SVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            K+V VG NY  H KE    VPKEP++F K  SS +G    + +P     +  EVELAVVIG+K + +  T AM +V G+ VA D++AR+  +  +  G  W + K  DTF P+  +++ K +V DPHNL++   V+GE+ Q  +T  M+F    LI+ +S  +T + GDVILTGTP GVG
Sbjct:  107 KVVCVGMNYVDHCKEQNVPVPKEPIIFSKFASSIVGPYDEVVLPPQSQEVDWEVELAVVIGKKGKHIKATDAMAHVAGFTVAHDVSARDWLT--RRNGKQWLLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSSNTNQMVFKTEDLIAWVSQFVTFYPGDVILTGTPPGVG 284          
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: FAHD2_MOUSE (Fumarylacetoacetate hydrolase domain-containing protein 2A OS=Mus musculus GN=Fahd2 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.634e-33
Identity = 74/180 (41.11%), Postives = 110/180 (61.11%), Query Frame = 2
Query:   71 KIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPIS-SVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            K++ VG NYA H +E    VPK P++F K +SS +G    I +P     +  EVE+AVVIG+K + +  T  M +V G+ VA D++AR+ Q      G  W + K  DTF P+  +++ K  + DPHNL++   V+GE+ Q  +T  M+F   YLI+ +S  +TL+ GD++LTGTP GVG
Sbjct:  107 KVICVGLNYADHCQEQNVRVPKSPIIFSKFSSSIVGPYDEIILPPESKEVDWEVEMAVVIGKKGKHIKATDVMAHVAGFTVAHDVSARDWQ---MRNGKQWLLGKTFDTFCPLGPALVTKDTIADPHNLKICCRVNGEVVQSSNTNQMVFKTEYLIAWVSQFVTLYPGDLLLTGTPPGVG 283          
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: FAHD2_RAT (Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus GN=Fahd2 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.665e-33
Identity = 75/180 (41.67%), Postives = 110/180 (61.11%), Query Frame = 2
Query:   71 KIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPIS-SVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            K++ VG NYA H +E    VPK P++F K +SS +G   +I +P     +  EVE+AVVIG+K + +  T  M YV G+ VA D++AR+ Q      G  W + K  DTF P+  +++ K  + DPHNL++   V+GEI Q  +T  M+F    LI+ +S  +TL+ GD++LTGTP GVG
Sbjct:  107 KVICVGLNYADHCQEQNVRVPKNPIIFSKFSSSIVGPYDSIILPPESKEVDWEVEMAVVIGKKGKHIKATDVMAYVAGFTVAHDVSARDWQ---MRNGKQWLLGKTFDTFCPLGPALVTKDTIADPHNLKISCRVNGEIVQSSNTNQMVFKTEDLIAWVSQFVTLYPGDILLTGTPPGVG 283          
The following BLAST results are available for this feature:
BLAST of CN186353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
UGL_BURA46.195e-3945.81Ureidoglycolate lyase OS=Burkholderia ambifaria (s... [more]
HPCE_ECOLX1.057e-3843.30Homoprotocatechuate catabolism bifunctional isomer... [more]
FMP41_YEAST1.057e-3836.55Uncharacterized mitochondrial hydrolase FMP41 OS=S... [more]
Y2225_ARCFU5.799e-3744.27Uncharacterized protein AF_2225 OS=Archaeoglobus f... [more]
HPAG_SALDU5.799e-3742.504-hydroxyphenylacetate degradation bifunctional is... [more]
FAH2A_HUMAN1.209e-3443.89Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD2_BOVIN7.837e-3442.78Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAH2B_HUMAN2.280e-3342.78Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD2_MOUSE6.634e-3341.11Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD2_RAT8.665e-3341.67Fumarylacetoacetate hydrolase domain-containing pr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002M08_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002M08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186353 ID=CN186353; Name=CN186353; organism=Citrus sinensis; type=EST; length=742bp
AGGTATCAGAATCGCTTAAGCGATGGCGACTGCATCATCGGCCGTACAAA
AGCTCATTCAAGCAGGCACCAAGATCGTGGCCGTTGGCCGTAACTATGCG
GCTCACGCCAAAGAGCTCGGCAACGCCGTGCCCAAGGAGCCGGTTTTGTT
TCTCAAACCGACGTCGTCTTATTTAGGAAACGGAGGGACCATCGAGGTAC
CTCATCCCCTGGATTCGCTTCATCATGAAGTGGAGCTTGCAGTCGTGATC
GGACAGAAAGCTCGAGATGTGCCTGAAACCACTGCCATGGACTATGTTGG
AGGCTATGCAGTGGCGCTTGATATGACTGCAAGGGAAATCCAATCTTCTG
CCAAGTCTGCAGGTCTTCCGTGGACAGTGGCTAAAGGGCAGGACACCTTC
ACACCAATTAGCTCTGTCCTACCAAAGTCAGCAGTGCCTGACCCTCACAA
CTTGGAACTATGGTTAACGGTTGATGGAGAGATTCGACAGAAAGGCTCCA
CTAAGGATATGATTTTTATGATACCATATCTAATTAGCCACATAAGTTCA
ATTATGACACTTTTTGAAGGAGATGTCATATTAACAGGCACTCCACAGGG
CGTTGGTCCTGTAAAAGTTGGTCAAAAGATAACAGCTGGTATAACGGGCC
TCCTGGATGTACACTTTGATATTGAAAAACGCCGAAGGCCNAGAAGTGCT
TGAACTTATGATGTCCACTCCACTGCAACTGCATTTCAAGCA
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