CN186353

Overview
NameCN186353
Unique NameCN186353
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6215 contig Csv1_Contig6215:88..829. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: FAHD2_XENLA (Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Xenopus laevis GN=fahd2 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.478e-32
Identity = 76/180 (42.22%), Postives = 105/180 (58.33%), Query Frame = 2
Query:   71 KIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPIS-SVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            KI+ +G NY  H  E    VPKEP++F K  SS +G    I +P     +  E ELA VIG+K +++ E  AMD+V GY VA D++AR+ Q   K  G  W + K  DTF P+  +++ K  + DPHNL +   V+G++ Q  +T  M+F    LI+  S  +TL  GDV LTGTP GVG
Sbjct:  112 KIICIGMNYVDHCLEQNVPVPKEPIIFNKFASSIVGPSDPIRIPEESQEVDWEAELAFVIGKKGKNIKEEDAMDHVVGYTVAHDVSARDWQ--MKKNGKQWLLGKTFDTFCPLGPALVTKDVISDPHNLGIRCRVNGDLVQNSNTNQMVFKTEALIAWASKFVTLNPGDVFLTGTPPGVG 289          
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: FAHD2_PONAB (Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Pongo abelii GN=FAHD2 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.930e-32
Identity = 77/180 (42.78%), Postives = 108/180 (60.00%), Query Frame = 2
Query:   71 KIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPIS-SVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            K+V V  NY  H KE    VPKEP +F K  SS +G    + +P     +  EVELAVVIG+K + +  T AM +V G+ VA D++AR+ Q   +  G  W + K  DTF P+  +++ K +V DPHNL++   V+GE+ Q  +T  M+F    LI+ +S  +T + GDVILTGTP GVG
Sbjct:  107 KVVCVRMNYVDHCKEQNVPVPKEPFIFSKFASSIVGPYDEVVLPPQSQEVDWEVELAVVIGKKGKHIKATDAMAHVAGFTVAHDVSARDWQ--MRRNGKQWLLGKTFDTFCPLGPALVTKDSVADPHNLKICCRVNGELVQSSNTNQMVFKTEDLIAWVSQFVTFYPGDVILTGTPPGVG 284          
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: FAHD2_DICDI (Fumarylacetoacetate hydrolase domain-containing protein 2 homolog OS=Dictyostelium discoideum GN=fahd2 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.335e-32
Identity = 74/191 (38.74%), Postives = 113/191 (59.16%), Query Frame = 2
Query:   71 KIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPIS---------SVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVGPVK 616
            KI+ +G NY  HA E   A+PKEP++F K  ++  G   +I  P   D + +EVEL VVIG++A++V E+ A+ YV GY V  D++AR+ Q    ++   W + K  DTF PI          + L      DP+NL +  T++G++ Q  +TK+ IF I  ++S++S + TL  GD+I TGTP GVG ++
Sbjct:   89 KIICIGLNYKEHANEAKMAIPKEPIVFSKFDNAICGPNDSIIKPVESDEVDYEVELVVVIGKQAKNVSESDALQYVAGYTVGNDVSARDWQLRKNNS--QWLLGKTFDTFAPIGPSIVINPEVAALSDDTYFDPNNLSIKCTLNGQVVQNSTTKEFIFNIQTVVSYLSKLFTLNPGDIIFTGTPSGVGFIR 277          
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: YISK_BACSU (Uncharacterized protein yisK OS=Bacillus subtilis GN=yisK PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.450e-29
Identity = 74/182 (40.66%), Postives = 109/182 (59.89%), Query Frame = 2
Query:   74 IVAVGRNYAAHAKELGNA--VPKEPVLFLKPTSSYLGNGGTIEVPHPLDS-LHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLP-KSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            I+ +G+NY  HA E+G+   +P+ P++F K   +  G+G  ++    + S L +E ELAVVIG+    + +  A D+V GY +  D+TAR++Q   K     + + K  DT  P+  VL  KS++ +P  L++   V+GE+RQ GS  DMIF IP LI  +S  MTL  GD+I TGTP GVG
Sbjct:   94 IICIGKNYRDHAIEMGSEADIPEHPMVFTKSPVTVTGHGDIVKSHEEVTSQLDYEGELAVVIGKSGTRISKEDAYDHVFGYTIVNDITARDLQKRHKQ----FFIGKSLDTTCPMGPVLVHKSSIQEPERLKVETRVNGELRQSGSASDMIFSIPELIETLSKGMTLEAGDIIATGTPSGVG 271          
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: Y973_STAAC (Uncharacterized protein SACOL0973 OS=Staphylococcus aureus (strain COL) GN=SACOL0973 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.899e-25
Identity = 72/180 (40.00%), Postives = 99/180 (55.00%), Query Frame = 2
Query:   74 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            ++A GRNY  HA EL + V K  V F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ QS    A L  ++  G     P+   ++ K  +P P N+ +   V+ EIRQ G+T +MI  I  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYKDHANELNHEVEKLYV-FTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGG----CPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269          
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: Y968_STAAM (Uncharacterized protein SAV0968 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0968 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.899e-25
Identity = 72/180 (40.00%), Postives = 99/180 (55.00%), Query Frame = 2
Query:   74 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            ++A GRNY  HA EL + V K  V F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ QS    A L  ++  G     P+   ++ K  +P P N+ +   V+ EIRQ G+T +MI  I  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYKDHANELNHEVEKLYV-FTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGG----CPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269          
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: Y906_STAA8 (Uncharacterized protein SAOUHSC_00906 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00906 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.899e-25
Identity = 72/180 (40.00%), Postives = 99/180 (55.00%), Query Frame = 2
Query:   74 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            ++A GRNY  HA EL + V K  V F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ QS    A L  ++  G     P+   ++ K  +P P N+ +   V+ EIRQ G+T +MI  I  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYKDHANELNHEVEKLYV-FTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGG----CPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269          
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: Y871_STAA3 (Uncharacterized protein SAUSA300_0871 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0871 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.899e-25
Identity = 72/180 (40.00%), Postives = 99/180 (55.00%), Query Frame = 2
Query:   74 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            ++A GRNY  HA EL + V K  V F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ QS    A L  ++  G     P+   ++ K  +P P N+ +   V+ EIRQ G+T +MI  I  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYKDHANELNHEVEKLYV-FTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGG----CPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269          
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: Y850_STAAW (Uncharacterized protein MW0850 OS=Staphylococcus aureus (strain MW2) GN=MW0850 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.899e-25
Identity = 72/180 (40.00%), Postives = 99/180 (55.00%), Query Frame = 2
Query:   74 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            ++A GRNY  HA EL + V K  V F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ QS    A L  ++  G     P+   ++ K  +P P N+ +   V+ EIRQ G+T +MI  I  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYKDHANELNHEVEKLYV-FTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGG----CPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269          
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: Y838_STAAS (Uncharacterized protein SAS0838 OS=Staphylococcus aureus (strain MSSA476) GN=SAS0838 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.899e-25
Identity = 72/180 (40.00%), Postives = 99/180 (55.00%), Query Frame = 2
Query:   74 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            ++A GRNY  HA EL + V K  V F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ QS    A L  ++  G     P+   ++ K  +P P N+ +   V+ EIRQ G+T +MI  I  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYKDHANELNHEVEKLYV-FTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGG----CPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269          
The following BLAST results are available for this feature:
BLAST of CN186353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
FAHD2_XENLA1.478e-3242.22Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD2_PONAB1.930e-3242.78Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD2_DICDI7.335e-3238.74Fumarylacetoacetate hydrolase domain-containing pr... [more]
YISK_BACSU4.450e-2940.66Uncharacterized protein yisK OS=Bacillus subtilis ... [more]
Y973_STAAC3.899e-2540.00Uncharacterized protein SACOL0973 OS=Staphylococcu... [more]
Y968_STAAM3.899e-2540.00Uncharacterized protein SAV0968 OS=Staphylococcus ... [more]
Y906_STAA83.899e-2540.00Uncharacterized protein SAOUHSC_00906 OS=Staphyloc... [more]
Y871_STAA33.899e-2540.00Uncharacterized protein SAUSA300_0871 OS=Staphyloc... [more]
Y850_STAAW3.899e-2540.00Uncharacterized protein MW0850 OS=Staphylococcus a... [more]
Y838_STAAS3.899e-2540.00Uncharacterized protein SAS0838 OS=Staphylococcus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002M08_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002M08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186353 ID=CN186353; Name=CN186353; organism=Citrus sinensis; type=EST; length=742bp
AGGTATCAGAATCGCTTAAGCGATGGCGACTGCATCATCGGCCGTACAAA
AGCTCATTCAAGCAGGCACCAAGATCGTGGCCGTTGGCCGTAACTATGCG
GCTCACGCCAAAGAGCTCGGCAACGCCGTGCCCAAGGAGCCGGTTTTGTT
TCTCAAACCGACGTCGTCTTATTTAGGAAACGGAGGGACCATCGAGGTAC
CTCATCCCCTGGATTCGCTTCATCATGAAGTGGAGCTTGCAGTCGTGATC
GGACAGAAAGCTCGAGATGTGCCTGAAACCACTGCCATGGACTATGTTGG
AGGCTATGCAGTGGCGCTTGATATGACTGCAAGGGAAATCCAATCTTCTG
CCAAGTCTGCAGGTCTTCCGTGGACAGTGGCTAAAGGGCAGGACACCTTC
ACACCAATTAGCTCTGTCCTACCAAAGTCAGCAGTGCCTGACCCTCACAA
CTTGGAACTATGGTTAACGGTTGATGGAGAGATTCGACAGAAAGGCTCCA
CTAAGGATATGATTTTTATGATACCATATCTAATTAGCCACATAAGTTCA
ATTATGACACTTTTTGAAGGAGATGTCATATTAACAGGCACTCCACAGGG
CGTTGGTCCTGTAAAAGTTGGTCAAAAGATAACAGCTGGTATAACGGGCC
TCCTGGATGTACACTTTGATATTGAAAAACGCCGAAGGCCNAGAAGTGCT
TGAACTTATGATGTCCACTCCACTGCAACTGCATTTCAAGCA
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