CN186353

Overview
NameCN186353
Unique NameCN186353
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6215 contig Csv1_Contig6215:88..829. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: Y837_STAAB (Uncharacterized protein SAB0837 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0837 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.899e-25
Identity = 72/180 (40.00%), Postives = 99/180 (55.00%), Query Frame = 2 
Query:   74 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            ++A GRNY  HA EL + V K  V F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ QS    A L  ++  G     P+   ++ K  +P P N+ +   V+ EIRQ G+T +MI  I  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYKDHANELNHEVEKLYV-FTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGG----CPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269
[Close]
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: Y829_STAAN (Uncharacterized protein SA0829 OS=Staphylococcus aureus (strain N315) GN=SA0829 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.899e-25
Identity = 72/180 (40.00%), Postives = 99/180 (55.00%), Query Frame = 2 
Query:   74 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            ++A GRNY  HA EL + V K  V F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ QS    A L  ++  G     P+   ++ K  +P P N+ +   V+ EIRQ G+T +MI  I  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYKDHANELNHEVEKLYV-FTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGG----CPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269
[Close]
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: Y930_STAAR (Uncharacterized protein SAR0930 OS=Staphylococcus aureus (strain MRSA252) GN=SAR0930 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.310e-24
Identity = 70/180 (38.89%), Postives = 98/180 (54.44%), Query Frame = 2 
Query:   74 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            ++A GRNY  HA EL + V +  V F K  SS  G+   I     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ QS    A L  ++  G     P+   ++ K  +P P N+ +   V+ EIRQ G+T +MI  I  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYKDHANELNHEVERLYV-FTKAASSLTGDNAKIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGG----CPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269
[Close]
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: Y1806_STAS1 (Uncharacterized protein SSP1806 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1806 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.602e-24
Identity = 68/180 (37.78%), Postives = 99/180 (55.00%), Query Frame = 2 
Query:   74 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            ++A GRNY  HA EL + V +  V F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DYV GY +  D+T R+ Q++   A L  ++  G     P+   ++ K  +P P ++ +   V+ +IRQ G+T  MI  I  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYQDHANELNHEVQRLYV-FTKAASSLTGDNSTIPNHKDITDQLDYEGELGIVIGKSGEKIPKGLALDYVYGYTIINDITDRKAQNAQDQAFLSKSLTGG----CPVGPYIVTKDELPTPEDVNIVTKVNNDIRQDGNTGQMILKIDELIEEISKYVALHPGDIIATGTPAGVG 269
[Close]
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: Y1982_STAHJ (Uncharacterized protein SH1982 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH1982 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.254e-23
Identity = 68/180 (37.78%), Postives = 98/180 (54.44%), Query Frame = 2 
Query:   74 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            ++A GRNY  HA EL + V +  V F K  SS  G+  TI     + D L +E EL +VIG+    +P+  A+DY+ GY +  D+T R+ Q+    A L  ++  G     P+   ++ K  +P P N+ +   V+ +IRQ G+T  MI  I  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYQDHASELNHEVQRLYV-FTKAASSLTGDESTIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYIYGYTIINDITDRKAQNEQDQAFLSKSLTGG----CPMGPYIVTKDELPTPENVNIVTKVNNDIRQDGNTSQMINKIDDLIEEISKYVALHPGDIIATGTPAGVG 269
[Close]
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: Y665_STAES (Uncharacterized protein SE_0665 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_0665 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.794e-23
Identity = 70/179 (39.11%), Postives = 96/179 (53.63%), Query Frame = 2 
Query:   74 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            ++A GRNY  HA EL + V    V F K  SS  G+  TI     + + L +E EL +VIG+    +P   A+DY+ GY +  D+T R  QSS   A L  ++  G     P   ++ K  +P P N+ +   V+ EIRQ G+T +MI  I  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYEDHASELNHEVDSLYV-FTKAASSLTGDEATIPNHKDITEQLDYEGELGIVIGKSGEKIPRGLALDYIYGYTIINDITDRTAQSSHDQAFLSKSLT-GACPMGPY--IVTKDELPAPENVNIVTKVNNEIRQDGNTGEMILKIDELIEKISKYVALHPGDIIATGTPAGVG 269
[Close]
BLAST of CN186353 vs. ExPASy Swiss-Prot
Match: Y556_STAEQ (Uncharacterized protein SERP0556 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0556 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.794e-23
Identity = 70/179 (39.11%), Postives = 96/179 (53.63%), Query Frame = 2 
Query:   74 IVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPL-DSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVG 607
            ++A GRNY  HA EL + V    V F K  SS  G+  TI     + + L +E EL +VIG+    +P   A+DY+ GY +  D+T R  QSS   A L  ++  G     P   ++ K  +P P N+ +   V+ EIRQ G+T +MI  I  LI  IS  + L  GD+I TGTP GVG
Sbjct:   95 VIAFGRNYEDHASELNHEVDSLYV-FTKAASSLTGDEATIPNHKDITEQLDYEGELGIVIGKSGEKIPRGLALDYIYGYTIINDITDRTAQSSHDQAFLSKSLT-GACPMGPY--IVTKDELPAPENVNIVTKVNNEIRQDGNTGEMILKIDELIEKISKYVALHPGDIIATGTPAGVG 269
The following BLAST results are available for this feature:
BLAST of CN186353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
Y837_STAAB3.899e-2540.00Uncharacterized protein SAB0837 OS=Staphylococcus ... [more]
Y829_STAAN3.899e-2540.00Uncharacterized protein SA0829 OS=Staphylococcus a... [more]
Y930_STAAR4.310e-2438.89Uncharacterized protein SAR0930 OS=Staphylococcus ... [more]
Y1806_STAS19.602e-2437.78Uncharacterized protein SSP1806 OS=Staphylococcus ... [more]
Y1982_STAHJ1.254e-2337.78Uncharacterized protein SH1982 OS=Staphylococcus h... [more]
Y665_STAES2.794e-2339.11Uncharacterized protein SE_0665 OS=Staphylococcus ... [more]
Y556_STAEQ2.794e-2339.11Uncharacterized protein SERP0556 OS=Staphylococcus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002M08_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002M08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186353 ID=CN186353; Name=CN186353; organism=Citrus sinensis; type=EST; length=742bp
AGGTATCAGAATCGCTTAAGCGATGGCGACTGCATCATCGGCCGTACAAA
AGCTCATTCAAGCAGGCACCAAGATCGTGGCCGTTGGCCGTAACTATGCG
GCTCACGCCAAAGAGCTCGGCAACGCCGTGCCCAAGGAGCCGGTTTTGTT
TCTCAAACCGACGTCGTCTTATTTAGGAAACGGAGGGACCATCGAGGTAC
CTCATCCCCTGGATTCGCTTCATCATGAAGTGGAGCTTGCAGTCGTGATC
GGACAGAAAGCTCGAGATGTGCCTGAAACCACTGCCATGGACTATGTTGG
AGGCTATGCAGTGGCGCTTGATATGACTGCAAGGGAAATCCAATCTTCTG
CCAAGTCTGCAGGTCTTCCGTGGACAGTGGCTAAAGGGCAGGACACCTTC
ACACCAATTAGCTCTGTCCTACCAAAGTCAGCAGTGCCTGACCCTCACAA
CTTGGAACTATGGTTAACGGTTGATGGAGAGATTCGACAGAAAGGCTCCA
CTAAGGATATGATTTTTATGATACCATATCTAATTAGCCACATAAGTTCA
ATTATGACACTTTTTGAAGGAGATGTCATATTAACAGGCACTCCACAGGG
CGTTGGTCCTGTAAAAGTTGGTCAAAAGATAACAGCTGGTATAACGGGCC
TCCTGGATGTACACTTTGATATTGAAAAACGCCGAAGGCCNAGAAGTGCT
TGAACTTATGATGTCCACTCCACTGCAACTGCATTTCAAGCA
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