CN186350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNSC (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain CC9605) GN=clpP3 PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.907e-49 Identity = 101/197 (51.27%), Postives = 131/197 (66.50%), Query Frame = -1 Query: 240 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 827 MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D SK +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLLA G KG R A+P SRI + P G +R QA DI EA E+LR+++ + + LS +GQ FEKI KD R ++EA EYGLIDR+I P Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQPLGGTSRRQASDIEIEAREILRMKEMLNRSLSDMSGQSFEKIEKDTDRDYFLSAEEAKEYGLIDRVISHP 197
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMT (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain NATL2A) GN=clpP2 PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.093e-48 Identity = 98/197 (49.75%), Postives = 131/197 (66.50%), Query Frame = -1 Query: 240 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 827 MPIGTP V YR PG +WVD++ L ER++F+GQ +++ +N ++A MLYLDS D SK +Y+YIN PGG VT LAIYDTM+ +KS + T CVG A + FLL+ G KG R A+P SRI + P G A+ QA DI EA E+LR+++ + K ++ TGQ +EKI KD R ++EA YGLIDR+I P Sbjct: 1 MPIGTPSVPYRLPGSQFERWVDIYTRLGAERILFLGQEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTMKYVKSDLVTICVGLAASMGAFLLSAGTKGKRLALPHSRIMIHQPLGGTAQRQASDIEIEAREILRIKEMLNKSMAEMTGQTYEKIEKDTDRDYFLSAEEAKNYGLIDRVITHP 197
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNS9 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain CC9902) GN=clpP3 PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.428e-48 Identity = 100/197 (50.76%), Postives = 130/197 (65.99%), Query Frame = -1 Query: 240 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 827 MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D SK +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLLA G KG R A+P SRI + P G +R QA DI EA E+LR++D + L+ +GQ FEKI KD R ++EA+ YGLIDR+I P Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQPLGGTSRRQASDIEIEAREILRMKDMLNHSLADMSGQTFEKIEKDTDRDYFLSAEEAMAYGLIDRVISHP 197
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMA (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus GN=clpP2 PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.428e-48 Identity = 97/197 (49.24%), Postives = 131/197 (66.50%), Query Frame = -1 Query: 240 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 827 MPIGTP V YR PG +WVD++ L ER++F+GQ + + +N ++A MLYLDS D +K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLL+ G K R A+P SRI + P G ++ QA DI EA E+LR++D + + ++ TGQPFEKI KD R ++EA +YGLID++I P Sbjct: 1 MPIGTPSVPYRLPGSQFERWVDIYTRLGAERILFLGQEVTDGVANSLVAQMLYLDSEDSTKPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLSAGTKNKRLALPHSRIMIHQPLGGTSQRQASDIEIEAKEILRIKDMLNRSMAEMTGQPFEKIEKDTDRDYFLSAKEAKDYGLIDKVISHP 197
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNPX (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain WH8102) GN=clpP3 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.435e-48 Identity = 99/197 (50.25%), Postives = 131/197 (66.50%), Query Frame = -1 Query: 240 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 827 MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D SK +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLLA G KG R A+P SRI + P G +R QA DI EA E+LR+++ + + LS +GQ F+KI KD R ++EA +YGLIDR+I P Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQPLGGTSRRQASDIEIEAREILRMKEMLNRSLSDMSGQSFDKIEKDTDRDYFLSAEEAKDYGLIDRVISHP 197
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP2_PROM9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain MIT 9312) GN=clpP2 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.435e-48 Identity = 99/197 (50.25%), Postives = 131/197 (66.50%), Query Frame = -1 Query: 240 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 827 MPIGTP V YR PG +WVD++ L ER++F+GQ +++ +N ++A MLYLDS D+SK +Y+YIN PGG VT LAIYDT++ +KS V T CVG A + FLLA G KG R A+P SRI + P G ++ QA DI EA E+LR++D + ++ TGQ FEKI KD R ++EA YGLIDR+I P Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDNSKPIYLYINSPGGSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQPLGGTSQRQASDIEIEAKEILRIKDMLNMSMADMTGQSFEKIEKDTDRDYFLSAEEAKNYGLIDRVITHP 197
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMP (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpP2 PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 9.254e-48 Identity = 98/197 (49.75%), Postives = 130/197 (65.99%), Query Frame = -1 Query: 240 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 827 MPIGTP V YR PG +WVD++ L ER++F+GQ +++ +N ++A MLYLDS D++K +Y+YIN PGG VT LAIYDT++ +KS V T CVG A + FLL G KG R A+P SRI + P G ++ QA DI EA E+LR++D + +S TGQ FEKI KD R ++EA YGLIDR+I P Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDNTKPIYLYINSPGGSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLGAGTKGKRVALPHSRIMIHQPLGGTSQRQASDIEIEAREILRIKDMLNHSMSDMTGQSFEKIEKDTDRDYFLSAEEAKNYGLIDRVISHP 197
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMM (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=clpP2 PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.578e-47 Identity = 98/197 (49.75%), Postives = 127/197 (64.47%), Query Frame = -1 Query: 240 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 827 MPIGTP V YR PG +WVD++ L ER++F+GQ + + +N ++A MLYLDS D +K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLL G KG R A+P SRI + P G + QA DI EA E+LR++D + ++ TGQ FEKI KD R + EA +YGLIDR+I P Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGQEVSDGVANSLVAQMLYLDSEDSTKPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPHSRIMIHQPLGGTNQRQASDIEIEAREILRIKDMLNHSMAELTGQSFEKIEKDTDRDYFLSAAEAKDYGLIDRVIAHP 197
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_OSTTA (ATP-dependent Clp protease proteolytic subunit OS=Ostreococcus tauri GN=clpP PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.834e-47 Identity = 90/192 (46.88%), Postives = 128/192 (66.67%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV YR PGE + QWVDL+N LYRERV+F+G +D+E +NQ+ MLYL + D S+ +++YIN PGG VT L+++D M +++ V T +GFA +A F+LAGGE+G+R A+P R+ + P G GQA ++ E +E++R+R I + TGQP I DL R K ++EA EYGL+D + Sbjct: 1 MPIGVPKVAYRLPGESTPQWVDLYNRLYRERVLFLGSGLDDELANQLNGIMLYLSAEDASRSLFLYINSPGGSVTAGLSVFDIMNYVQASVTTIGIGFAASMASFILAGGERGSRIALPHCRVMIHQPQGGMEGQASEVVLEKEEIVRLRRLIGRLYVDLTGQPLSTIANDLDRDKYLSAREAREYGLVDLV 192
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_CYAP8 (ATP-dependent Clp protease proteolytic subunit OS=Cyanothece sp. (strain PCC 8801) GN=clpP PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 1.023e-46 Identity = 95/194 (48.97%), Postives = 128/194 (65.98%), Query Frame = -1 Query: 249 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 827 MP+G P V YR PG +W+D++ L +ER+IF+GQ + + +N+I+A +LYLDS D K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G G R A+P +RI + P G R QA DI+ EA+E+LR+R + + L+ KTGQ EKI KD R ++EA YGLID++I Sbjct: 1 MPLGVPSVPYRLPGSQYERWIDIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPGKPIYLYINSPGGSVTAGMAIYDTMQYIKSDVITICVGLAASMGAFLLASGTPGKRLALPHARIMIHQPMGGTGRRQATDIQIEANEILRIRQQLNEILAHKTGQTIEKIQKDTDRDYYMSAEEAQAYGLIDKVI 194 The following BLAST results are available for this feature:
BLAST of CN186350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186350 ID=CN186350; Name=CN186350; organism=Citrus sinensis; type=EST; length=860bpback to top |