CN186350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNS9 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9902) GN=clpP1 PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.026e-38 Identity = 80/172 (46.51%), Postives = 113/172 (65.70%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +Y+YIN PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI + P G A GQA DIR +ADE+L ++D + ELS +TGQP ++I +D R EA+ YGLID +I Sbjct: 17 DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGASGQASDIRIQADEILYLKDRLNTELSDRTGQPLDRIQEDTDRDFFMSPGEAVSYGLIDSVI 188
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_LIRTU (ATP-dependent Clp protease proteolytic subunit OS=Liriodendron tulipifera GN=clpP PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.339e-38 Identity = 78/193 (40.41%), Postives = 122/193 (63.21%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD++ +Y++IN PGG V P ++IYDTMQ + V T C+G A + F+L GGE R A P +R+ + PA + + EA+ELL++R+ + + ++TG P +++D+ R + EA +G++D + Sbjct: 1 MPIGVPKVPFRSPGEEDAIWVDVFNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDTRDLYLFINSPGGWVIPGISIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMSAAEAQAHGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_DRIGR (ATP-dependent Clp protease proteolytic subunit OS=Drimys granadensis GN=clpP PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.339e-38 Identity = 79/191 (41.36%), Postives = 121/191 (63.35%), Query Frame = -1 Query: 258 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLID 827 MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD++ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P +R+ + PA + + EA+ELL++R+ + + ++TG P I++D+ R + EA +G++D Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRTGNPLWVISEDMERDVFMSATEAQAHGIVD 191
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNSC (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9605) GN=clpP2 PE=3 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 2.285e-38 Identity = 79/172 (45.93%), Postives = 114/172 (66.28%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +Y+YIN PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI + P G A+GQA DIR +ADE+L +++ + KELS +TGQ ++I +D R EA+ YGLID +I Sbjct: 17 DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGAQGQASDIRIQADEILFLKERLNKELSDRTGQTLDRIQQDTDRDFFMSPTEAMNYGLIDSVI 188
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SYNWW (ATP-dependent Clp protease proteolytic subunit OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=clpP PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.984e-38 Identity = 80/193 (41.45%), Postives = 124/193 (64.25%), Query Frame = -1 Query: 237 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 812 P V+ +T GE S+ D+++ L ++R+IF+G ID+ +N ++A +L+L++ D K + +YIN PGG +T +AIYDT+Q ++ V T CVG A + FLLA G+KG R A+P + I + PAG +GQA DI A ++ +++ + K L+ +TGQP E+I KD R +QEA EYG+ID +I P+ Sbjct: 6 PMVVEQTNRGERSY---DIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPGGSITAGMAIYDTLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAEIMIHQPAGGTQGQATDIEIHARRIMNMKESLNKILAERTGQPLERIQKDTDRDYFMTAQEAKEYGIIDEVISHPK 195
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_AMBTC (ATP-dependent Clp protease proteolytic subunit OS=Amborella trichopoda GN=clpP PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.984e-38 Identity = 80/193 (41.45%), Postives = 121/193 (62.69%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MP+G PKV +R+PGE WVD++N L+RER++F+GQ ++ E SNQI+ M+YL DD++ +Y++IN PGG V P +AIYD MQ + V T C+G A + F+LAGGE R A P +R+ + PA + A + EA ELL++R+ I ++TG P +++D+ R + EA +G++D I Sbjct: 1 MPVGVPKVPFRSPGEEDATWVDIYNRLHRERLLFLGQEVEGEISNQIVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDAMQFVPPDVHTICMGLAASMGSFVLAGGEITKRLAFPHARVMIHQPASSFYEAPAGEFILEAGELLKLRETITSVYVQRTGNPLWVVSEDMERDVFMSATEAQAHGIVDLI 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNY3 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechocystis sp. (strain PCC 6803) GN=clpP2 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.984e-38 Identity = 79/179 (44.13%), Postives = 116/179 (64.80%), Query Frame = -1 Query: 228 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKE 764 D+++ L RER+IF+G +D++ ++ I+A +L+LD+ D K + +YIN PGG V LAIYDTMQ ++ V T C G A + FLL+GG KG R A+P SRI + P G A+GQA +I +A E+L ++D + L TGQP EK+ +D R ++EA EYGLID++I P + + Sbjct: 39 DIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGCKGKRMALPSSRIMIHQPLGGAQGQAVEIEIQAREILYIKDRLNTMLVEHTGQPMEKLQEDTERDFFMSAEEAKEYGLIDQVISRPNLPD 217
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_THELT (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=clpP PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.897e-38 Identity = 80/176 (45.45%), Postives = 113/176 (64.20%), Query Frame = -1 Query: 237 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 764 D+++ L ++R++F+G ID+ +N ++A +L+L++ D K + +YIN PGG VT LAIYDTMQ +KS V T CVG A +A LLA G KG R A+P +RI L P G A G D+ ELLR+++ I LS KTGQP ++I KD R + EAL+YGL+D++I R Sbjct: 23 DIYSRLLKDRIVFLGYAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPGGSVTAGLAIYDTMQYIKSDVVTICVGQAASMAAVLLASGTKGKRFALPNARIMLHQPLGGAEGPVKDVEIITKELLRIKNLINTILSEKTGQPLDRIEKDTDRDFFMSAYEALDYGLVDKVIESKR 198
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_NATTJ (ATP-dependent Clp protease proteolytic subunit OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=clpP PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.897e-38 Identity = 82/192 (42.71%), Postives = 125/192 (65.10%), Query Frame = -1 Query: 240 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 812 P V+ +T GE S+ D+++ L ++R+IFIG I+++ +N ++A ML+L+S D K +++YIN PGG V LAIYDTMQ ++S V T CVG A + LLA G +G R +P SRI L P G A+GQA D+ A E+++ ++ + + L+ TGQP E+I+KD R S+EA +YG+ID +++ P Sbjct: 5 PMVIEQTNRGERSY---DIYSRLLKDRIIFIGTGINDDIANSVIAQMLFLESEDPDKDIHLYINSPGGHVHAGLAIYDTMQYIRSDVSTICVGMAASMGAVLLAAGNEGKRFCLPNSRIMLHQPMGGAQGQAADVEIHAREIMKTKERLNQILAHHTGQPVEQISKDTDRDFFMSSEEAQKYGVIDDVLKRP 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SHEAM (ATP-dependent Clp protease proteolytic subunit OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=clpP PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.090e-38 Identity = 83/189 (43.92%), Postives = 120/189 (63.49%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ ++E +N I+A +L+L+S + K +Y+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGGEKG R +P SR+ + P G +GQA DI A E+L ++ + + LS TGQP E I +D R + +A+EYGLID ++ Sbjct: 14 PMVVEQTAKGERSY---DIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESENPDKEIYLYINSPGGSVTAGMAIYDTMQFIKPKVSTVCIGQACSMGAFLLAGGEKGMRHCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKHKLNQMLSHHTGQPMEVIERDTDRDNFMSATQAVEYGLIDSVL 199 The following BLAST results are available for this feature:
BLAST of CN186350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186350 ID=CN186350; Name=CN186350; organism=Citrus sinensis; type=EST; length=860bpback to top |