CN186350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_RALME (ATP-dependent Clp protease proteolytic subunit OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=clpP PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.647e-38 Identity = 82/191 (42.93%), Postives = 121/191 (63.35%), Query Frame = -1 Query: 249 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 821 +G ++ G G + D+++ L +ERV+F+ ++++ +N ++A +L+L+S + K V +YIN PGG V+ LAIYDTMQ +K V T C+G A + FLLA G KG RSA+P SRI + P G ARGQA DI +A E+L +R+ + LS TGQP EKI +D R +A++YGLID++I Sbjct: 23 LGLVPMVVEQSGRGERAY-DIYSRLLKERVVFMVGEVNDQTANLVVAQLLFLESENPDKDVSLYINSPGGSVSAGLAIYDTMQFIKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNSILSEVTGQPVEKIARDTDRDNFMSGDQAVDYGLIDKVI 212
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_DESRM (ATP-dependent Clp protease proteolytic subunit OS=Desulfotomaculum reducens (strain MI-1) GN=clpP PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.647e-38 Identity = 77/172 (44.77%), Postives = 113/172 (65.70%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L ++R+IFIG ID+ +N ++A L+L++ D K +++YIN PGG VT LAIYDTMQ +K V T C+G A + FLLA G G R A+P++RI + P G +GQA DI A E+LR++D + L+ TGQP E+IT+D R ++EA +YGLID ++ Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHLYINSPGGVVTAGLAIYDTMQYIKPAVSTICLGQAASMGSFLLAAGAPGKRYALPMARIMIHQPLGGVQGQATDIDIHAKEILRMKDLLNDRLAHHTGQPLEQITRDTERDYFMSAEEAKKYGLIDEVM 191
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_CHLSC (ATP-dependent Clp protease proteolytic subunit OS=Chloranthus spicatus GN=clpP PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.647e-38 Identity = 81/193 (41.97%), Postives = 122/193 (63.21%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL DD++ +Y++IN PGG V P L IYDTMQ + V T C+G A + F+L GGE R A P +RI + PA + QA + EA+ELL++R+ + + ++TG P +++D+ R + EA +G++D + Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDTRDLYLFINSPGGWVIPGLTIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARIMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGNPLWIVSEDMERDVFMSATEAQAHGIVDLV 192
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_THETN (ATP-dependent Clp protease proteolytic subunit OS=Thermoanaerobacter tengcongensis GN=clpP PE=3 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 8.682e-38 Identity = 78/172 (45.35%), Postives = 114/172 (66.28%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L ++R++F+G I++ ++ ++A ML+L++ D K +++YIN PGG +T LAIYDTMQ +K V T CVG A +A FLLA G KG R A+P S I + P G +GQA DI+ A+ LLR+RD + + LS TGQP EKI D+ R ++EA YG+ID I+ Sbjct: 19 DIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDIWLYINSPGGSITAGLAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPWGGMQGQATDIKIHAERLLRLRDKLERILSENTGQPLEKIKADMERDYFMTAEEAKTYGIIDDIL 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_RALEJ (ATP-dependent Clp protease proteolytic subunit OS=Ralstonia eutropha (strain JMP134) GN=clpP PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.682e-38 Identity = 81/191 (42.41%), Postives = 121/191 (63.35%), Query Frame = -1 Query: 249 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 821 +G ++ G G + D+++ L +ERV+F+ ++++ +N ++A +L+L+S + K + +YIN PGG V+ LAIYDTMQ +K V T C+G A + FLLA G KG RSA+P SRI + P G ARGQA DI +A E+L +R+ + LS TGQP EKI +D R +A++YGLID++I Sbjct: 23 LGLVPMVVEQSGRGERAY-DIYSRLLKERVVFLVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGLAIYDTMQFVKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNSILSEVTGQPVEKIARDTDRDNFMSGDQAVDYGLIDKVI 212
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_RALEH (ATP-dependent Clp protease proteolytic subunit OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=clpP PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.682e-38 Identity = 81/191 (42.41%), Postives = 121/191 (63.35%), Query Frame = -1 Query: 249 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 821 +G ++ G G + D+++ L +ERV+F+ ++++ +N ++A +L+L+S + K V +YIN PGG V+ LAIYDTMQ +K V T C+G A + FLLA G KG RSA+P SRI + P G ARGQA DI +A E+L +R+ + LS TGQP EKI +D R +A++YGLID+++ Sbjct: 23 LGLVPMVVEQSGRGERAY-DIYSRLLKERVVFMVGEVNDQTANLVVAQLLFLESENPDKDVSLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQPVEKIARDTDRDNFMSGDQAVDYGLIDKVL 212
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_CUPTR (ATP-dependent Clp protease proteolytic subunit OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=clpP PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.682e-38 Identity = 81/191 (42.41%), Postives = 121/191 (63.35%), Query Frame = -1 Query: 249 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 821 +G ++ G G + D+++ L +ERV+F+ ++++ +N ++A +L+L+S + K V +YIN PGG V+ LAIYDTMQ +K V T C+G A + FLLA G KG RSA+P SRI + P G ARGQA DI +A E+L +R+ + LS TGQP EKI +D R +A++YGLID+++ Sbjct: 23 LGLVPMVVEQSGRGERAY-DIYSRLLKERVVFMVGEVNDQTANLVVAQLLFLESENPDKDVSLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQPVEKIARDTDRDNFMSGDQAVDYGLIDKVL 212
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_BACSU (ATP-dependent Clp protease proteolytic subunit OS=Bacillus subtilis GN=clpP PE=1 SV=3) HSP 1 Score: 157.532 bits (397), Expect = 8.682e-38 Identity = 76/172 (44.19%), Postives = 112/172 (65.12%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L ++R+I +G ID+ +N I++ +L+L + D K + +YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S + + P G A+GQA +I A +L +RD + K L+ +TGQP E I +D R ++EALEYGLID+I+ Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKIL 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ACOGR (ATP-dependent Clp protease proteolytic subunit OS=Acorus gramineus GN=clpP PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.682e-38 Identity = 76/193 (39.38%), Postives = 122/193 (63.21%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKVL+ +PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL D ++ +++IN PGG V P + +YDTMQ + V T C+G A + F+L GGE R A P +R+ + PA + QA + EA+ELL++R+ + + ++TG+P +++D+ R + EA +G++D + Sbjct: 1 MPIGVPKVLFGSPGEEDAAWVDIYNRLHRERLLFLGQELDSEISNQLVGLMVYLSIEDKTRDFFLFINSPGGWVIPGIGLYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFLSATEAQAHGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ACOCL (ATP-dependent Clp protease proteolytic subunit OS=Acorus calamus GN=clpP PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.682e-38 Identity = 76/193 (39.38%), Postives = 122/193 (63.21%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL D ++ +++IN PGG V P + +YDTMQ + V T C+G A + F+L GGE R A P +R+ + PA + QA + EA+ELL++R+ + + ++TG+P +++D+ R + EA +G++D + Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDIYNRLHRERLLFLGQELDSEISNQLVGLMVYLSIEDKTRDFFLFINSPGGWVIPGIGLYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFLSATEAQAHGIVDLV 193 The following BLAST results are available for this feature:
BLAST of CN186350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186350 ID=CN186350; Name=CN186350; organism=Citrus sinensis; type=EST; length=860bpback to top |