CN186350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMM (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus (strain MIT 9313) GN=clpP3 PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.682e-38 Identity = 78/172 (45.35%), Postives = 113/172 (65.70%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +Y+YIN PGG V L I+DTMQ +K V T CVG A + FLL G G RS++ SRI + P G ARGQA DIR +ADE+L ++D + + L+ +TGQP E+I +D R EA+ YGL+D +I Sbjct: 17 DIYSRLLRERIIFLGEPVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLGIFDTMQHVKPDVQTVCVGLAASMGAFLLCAGAMGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILFLKDRLNRVLADRTGQPLERIQEDTDRDFFMSPAEAVGYGLVDSVI 188
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMA (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus GN=clpP3 PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.682e-38 Identity = 76/172 (44.19%), Postives = 115/172 (66.86%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L RER+IF+G +++++ ++ ++A ML+L++ D K + +YIN PGG VT LAIYDTMQ + + T C G A + FLLAGG KG R A+P SRI + P G A+GQA +I +A E+L +++ + L+ TGQ EKI++D R QEA+EYGLID+++ Sbjct: 41 DIYSRLLRERIIFLGTDVNDQIADALVAQMLFLEAEDPEKDIQLYINSPGGSVTAGLAIYDTMQQVNPDIVTMCYGLAASMGAFLLAGGSKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKETLNNLLAEHTGQSLEKISEDTDRDHFLSPQEAVEYGLIDKVV 212
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_THET8 (ATP-dependent Clp protease proteolytic subunit OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=clpP PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.134e-37 Identity = 73/172 (42.44%), Postives = 117/172 (68.02%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L ++R+IF+G ID + +N ++A +L+LD+ + ++ + +YIN PGG+V LAIYDTMQ +++PV T +G A +A +LA GEKG R A+P +++ + P G RG A DI +A E+L+ + + + L++ TGQP EK+ KD R +QEALEYGLID+++ Sbjct: 18 DIYSRLLKDRIIFLGTPIDAQVANVVVAQLLFLDAQNPNQEIKLYINSPGGEVDAGLAIYDTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHAKVMIHQPWGGVRGTASDIAIQAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALEYGLIDQVV 189
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_THET2 (ATP-dependent Clp protease proteolytic subunit OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=clpP PE=3 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 1.134e-37 Identity = 73/172 (42.44%), Postives = 117/172 (68.02%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L ++R+IF+G ID + +N ++A +L+LD+ + ++ + +YIN PGG+V LAIYDTMQ +++PV T +G A +A +LA GEKG R A+P +++ + P G RG A DI +A E+L+ + + + L++ TGQP EK+ KD R +QEALEYGLID+++ Sbjct: 18 DIYSRLLKDRIIFLGTPIDAQVANVVVAQLLFLDAQNPNQEIKLYINSPGGEVDAGLAIYDTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHAKVMIHQPWGGVRGTASDIAIQAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALEYGLIDQVV 189
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SYNAS (ATP-dependent Clp protease proteolytic subunit OS=Syntrophus aciditrophicus (strain SB) GN=clpP PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.481e-37 Identity = 78/172 (45.35%), Postives = 114/172 (66.28%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L ++R+IF+G ID+E +N I+A +L+L+S D K ++ Y+N PGG ++ +AIYDTM+ +K PV T CVG A + LLA GE+G RSA+P SRI + P G +GQA DI +A E+LR++D + L+ T QP ++I D R SQ+A EYG+ID II Sbjct: 19 DIYSRLLKDRIIFLGTPIDDEVANLIIAQLLFLESEDPDKEIFFYLNTPGGHISSGMAIYDTMRYIKPPVATVCVGQAASMGALLLAAGEQGKRSALPHSRILIHQPLGGFQGQATDIDIQAREILRLKDELSLILADLTNQPLDRIKTDTERDYYMTSQQAKEYGIIDEII 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_PIPCE (ATP-dependent Clp protease proteolytic subunit OS=Piper cenocladum GN=clpP PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.481e-37 Identity = 78/193 (40.41%), Postives = 120/193 (62.18%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQI+ M+YL D ++ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P + + + PA + + EA+ELL++R+ + + ++TG P +++DL R + EA +G++D + Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDVYNRLHRERLLFLGQEVDSEISNQIVGLMVYLSIEDGTRDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPHAWVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDLERDVFMSATEAQAHGIVDLV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_EUBR3 (ATP-dependent Clp protease proteolytic subunit OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=clpP PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.481e-37 Identity = 74/172 (43.02%), Postives = 116/172 (67.44%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L ++R+IF+G+ ++E ++ ++A +L+L+S D +K +++YIN PGG VT LAIYDTMQ +K V T C+G A + FLLAGG KG R A+P + I + P+G A+GQA +I+ A+ +L+ + + + L+ TG+P+E I D R +QEA EYGLID +I Sbjct: 19 DIYSRLLKDRIIFLGEEVNETTASLVVAQLLFLESEDPNKDIHLYINSPGGMVTAGLAIYDTMQYIKCDVSTICIGLAASMGAFLLAGGAKGKRYALPNAEIMIHQPSGGAKGQATEIQIAAENILKTKKRLNEILAANTGKPYETIAADTERDNYMSAQEAAEYGLIDSVI 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_DESOH (ATP-dependent Clp protease proteolytic subunit OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=clpP PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.481e-37 Identity = 82/194 (42.27%), Postives = 125/194 (64.43%), Query Frame = -1 Query: 249 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 827 MP+ P V+ +T GE ++ D+++ L ++R++FIG ID+E +N ++A +L+L+S D K + YIN PGG V+ +AIYDTMQ +KS + T C+G A + FLLA G KG R ++P SRI + P G A+GQA DI +A E+LR++D + + L+ TG+P E+I D R +EA YG++D +I Sbjct: 1 MPL-IPMVIEQTSRGERAF---DIYSRLLKDRIVFIGSAIDDETANLLIAQLLFLESEDPDKDINFYINSPGGKVSAGMAIYDTMQYIKSDIATVCIGHAASMGAFLLAAGAKGKRFSLPNSRIMIHQPMGGAQGQASDIAIQAKEILRMKDILNQILAHHTGKPLEQIQVDTDRDFFMSGEEAKAYGIVDHVI 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_BACA2 (ATP-dependent Clp protease proteolytic subunit OS=Bacillus amyloliquefaciens (strain FZB42) GN=clpP PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.481e-37 Identity = 75/172 (43.60%), Postives = 112/172 (65.12%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L ++R+I +G ID+ +N I++ +L+L++ D K + +YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S + + P G A+GQA +I A +L +RD + K L+ +TGQP E I +D R + EALEYGLID+++ Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSADEALEYGLIDKVL 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP1_MYXXD (ATP-dependent Clp protease proteolytic subunit 1 OS=Myxococcus xanthus (strain DK 1622) GN=clpP1 PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.481e-37 Identity = 85/199 (42.71%), Postives = 124/199 (62.31%), Query Frame = -1 Query: 234 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 827 MP+ P V+ +T GE S+ D+++ L ++R++ +G ID++ +N I+A +L+L+S D K + +YIN PGG VT LAIYDTMQ +K PV T CVG A + LL G KG R A+P SRI + P G RGQA DI +A E+LR++ + + + + TGQ E++ KD R G+ EA YG+ID I P ++ Sbjct: 4 MPV--PYVIEQTHRGERSY---DIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGVRGQATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGASEAKAYGIIDEIQNPRKV 197 The following BLAST results are available for this feature:
BLAST of CN186350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186350 ID=CN186350; Name=CN186350; organism=Citrus sinensis; type=EST; length=860bpback to top |