CN186350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SORBI (ATP-dependent Clp protease proteolytic subunit OS=Sorghum bicolor GN=clpP PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.934e-37 Identity = 80/191 (41.88%), Postives = 117/191 (61.26%), Query Frame = -1 Query: 258 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLID 827 MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D + ++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P +RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R + EA YGL+D Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGNSDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVD 191
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SACOF (ATP-dependent Clp protease proteolytic subunit OS=Saccharum officinarum GN=clpP PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.934e-37 Identity = 80/191 (41.88%), Postives = 117/191 (61.26%), Query Frame = -1 Query: 258 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLID 827 MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D + ++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P +RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R + EA YGL+D Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGNSDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVD 191
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_SACHY (ATP-dependent Clp protease proteolytic subunit OS=Saccharum hybrid GN=clpP PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.934e-37 Identity = 80/191 (41.88%), Postives = 117/191 (61.26%), Query Frame = -1 Query: 258 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLID 827 MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D + ++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P +RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R + EA YGL+D Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGNSDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVD 191
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_DIOEL (ATP-dependent Clp protease proteolytic subunit OS=Dioscorea elephantipes GN=clpP PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.934e-37 Identity = 80/193 (41.45%), Postives = 121/193 (62.69%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL D +K +Y++IN PGG V P +AIYDTMQ + V T C+G A + +L GGE R A P +R+ + PA + QA + EA+ELL++R+ + K ++TG P +++D+ R + EA +G++D + Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDNEVSNQLVGLMVYLSIEDATKDLYLFINSPGGWVIPGMAIYDTMQFVSPDVHTICMGLAASMGSLILVGGEITKRLAFPHARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWAVSEDMERDAFMSATEAQAHGIVDLV 192
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_DESDG (ATP-dependent Clp protease proteolytic subunit OS=Desulfovibrio desulfuricans (strain G20) GN=clpP PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.934e-37 Identity = 78/172 (45.35%), Postives = 114/172 (66.28%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L ++R+I +G +D+ ++ I A +L+L+S + K +Y+YIN PGG VT LAIYDTMQ + +PV T C+G A + FLLA G+ G R A+P SRI + P G A+GQA DI +A E+LR++D + + LSR TGQP EKI + R G + A +G+IDRI+ Sbjct: 18 DIYSRLLKDRIILLGTPVDDNVASLICAQLLFLESENPEKEIYLYINSPGGVVTAGLAIYDTMQYISAPVATLCMGQAASMGAFLLAAGQPGMRFALPNSRIMIHQPMGGAQGQATDIDIQAREILRLKDRLNEILSRHTGQPLEKIVEHTDRDYFMGPENAKNFGIIDRIL 189
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_DESAH (ATP-dependent Clp protease proteolytic subunit OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=clpP PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.934e-37 Identity = 75/172 (43.60%), Postives = 115/172 (66.86%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L ++R+IF+G +D+E +N I+A +L+L+S D K + YIN PGG VT +A+YDTMQ +K V T C+G A + LLA G KG R ++P SRI + P G A+GQA DI+ +A+E+LR+++ + LS+ TGQ F+KI++D R +A EYGL+D ++ Sbjct: 19 DIYSRLLKDRIIFLGSAMDDEVANLIVAQLLFLESEDPEKDINFYINSPGGVVTAGMAVYDTMQYIKPDVATVCIGQAASMGALLLAAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIKIQANEILRMKEVLSGILSKHTGQNFDKISEDTDRDFFMSGDQAKEYGLVDHVV 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP4_PROM9 (ATP-dependent Clp protease proteolytic subunit 4 OS=Prochlorococcus marinus (strain MIT 9312) GN=clpP4 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.934e-37 Identity = 81/192 (42.19%), Postives = 119/192 (61.98%), Query Frame = -1 Query: 246 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 821 IG + G G + D+++ L RER+IF+G I+++ S+ ++A +L+L++ D K + +YIN PGG VT +AIYDTMQ + V T C G A + FLL+GG KG R A+P SRI + P G A+GQA +I +A E+L ++ + L+ TGQP EKI +D R EA+EYGLID++I+ Sbjct: 28 IGAVPTVIEQSGRGERAF-DIYSRLLRERIIFLGSGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPGGSVTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEAVEYGLIDKVIK 218
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP1_PROMA (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus GN=clpP1 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.934e-37 Identity = 74/172 (43.02%), Postives = 111/172 (64.53%), Query Frame = -1 Query: 249 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 764 D+++ L RER++F+G+ + + +N+I+A +L+L++ D K +++YIN PGG V I+DT+Q +K V T CVG A + FLL G KG RS++ SRI + P G ARGQA DIR +ADE+L ++ + ELS +TGQP KI +D R EA+ YG+ID ++ Sbjct: 17 DIYSRLLRERIVFLGEQVTNDSANRIVAQLLFLEAEDPEKDIFLYINSPGGSVYDGFGIFDTIQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGARGQATDIRIQADEILFLKQKLNTELSNRTGQPLSKIAEDTDRDFYMSPSEAISYGIIDNVL 188
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_MOOTA (ATP-dependent Clp protease proteolytic subunit OS=Moorella thermoacetica (strain ATCC 39073) GN=clpP PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.526e-37 Identity = 83/206 (40.29%), Postives = 127/206 (61.65%), Query Frame = -1 Query: 213 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKEDMPRK 827 M + P V+ +T GE ++ D+++ L ++R+IF+G ID+ +N ++A ML+L++ D K +++YIN PGG ++ +AI+DTMQ ++ V T CVG A + FLLA G KG R A+P S I + P G +GQA DI A +L +RD + + LS TG+P E+I +D R ++EA EYGLID +I K ++P K Sbjct: 1 MSVLVPMVVEQTSRGERAY---DIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDPDKDIHLYINSPGGSISAGMAIFDTMQYIRPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMIHQPMGGTQGQAVDIEIHAKRILAIRDNLNRILSEITGKPLEQIARDTDRDHFMTAREAREYGLIDEVI----TKRELPAK 199
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_HORVU (ATP-dependent Clp protease proteolytic subunit OS=Hordeum vulgare GN=clpP PE=3 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 2.526e-37 Identity = 80/191 (41.88%), Postives = 116/191 (60.73%), Query Frame = -1 Query: 258 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLID 827 MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D ++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P +RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R + EA YGL+D Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPAKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVD 191 The following BLAST results are available for this feature:
BLAST of CN186350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186350 ID=CN186350; Name=CN186350; organism=Citrus sinensis; type=EST; length=860bpback to top |