CN186350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_STAA3 (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain USA300) GN=clpP PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.309e-37 Identity = 74/174 (42.53%), Postives = 111/174 (63.79%), Query Frame = -1 Query: 243 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 764 D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + + + P G A+GQA +I A+ +L+ R+ + + LS +TGQ EKI KD R ++EA EYGLID ++ P Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVP 192
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_STAA2 (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain JH1) GN=clpP PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.309e-37 Identity = 74/174 (42.53%), Postives = 111/174 (63.79%), Query Frame = -1 Query: 243 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 764 D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + + + P G A+GQA +I A+ +L+ R+ + + LS +TGQ EKI KD R ++EA EYGLID ++ P Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVP 192
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_STAA1 (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=clpP PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.309e-37 Identity = 74/174 (42.53%), Postives = 111/174 (63.79%), Query Frame = -1 Query: 243 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 764 D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + + + P G A+GQA +I A+ +L+ R+ + + LS +TGQ EKI KD R ++EA EYGLID ++ P Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVP 192
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_PINKO (ATP-dependent Clp protease proteolytic subunit OS=Pinus koraiensis GN=clpP PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.309e-37 Identity = 77/193 (39.90%), Postives = 117/193 (60.62%), Query Frame = -1 Query: 252 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 827 MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +K ++ +IN PGG V P + ++D MQ + V T C+G A + F+L GGE R A+P +R+ + PA + G A + NEA + +R+YI K +T P E I +DL R + EA YG++D + Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDANKDIFSFINCPGGSVIPGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPHARVMIHQPASSYYDGPAAEFHNEAKHITMLRNYITKCYIERTDNPEEVIQRDLDRDVFMSATEARAYGIVDTV 193
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_PELCD (ATP-dependent Clp protease proteolytic subunit OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=clpP PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.309e-37 Identity = 82/189 (43.39%), Postives = 122/189 (64.55%), Query Frame = -1 Query: 246 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 812 P V+ +T G G + D+++ L ++R+IF+G +D++ +N I+A ML+L+S D K +++YIN PGG VT +AIYDTMQ ++ PV T CVG A + LLA G +G R A+P +RI + P G +GQA DI A E+LR+R+ + L+ TGQ EKI D R GS+EA +YG++D I++ Sbjct: 5 PMVVEQT-GRGERAY-DIFSRLLKDRIIFLGGAVDDQVANLIIAQMLFLESEDPEKEIFLYINSPGGVVTAGMAIYDTMQYVRCPVSTLCVGQAASMGAVLLAAGGEGKRFALPHARIMIHQPWGGFQGQATDINIHAQEILRLRETLNGVLASHTGQTLEKIATDTERDFFMGSEEAKKYGIVDDIVK 191
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ALKMQ (ATP-dependent Clp protease proteolytic subunit OS=Alkaliphilus metalliredigens (strain QYMF) GN=clpP PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.309e-37 Identity = 79/189 (41.80%), Postives = 122/189 (64.55%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ER+IF+G I++ ++ ++A +L+L++ D K + +YIN PGG +T +AIYDTM +K V T CVG A + FLLA G KG R A+P + + + P G RGQA+DIR A+ ++++RD + K L +TGQP E++ KD R ++EA EYG+ID +I Sbjct: 5 PVVVEQTSRGERSY---DIFSRLLKERIIFLGDEINDVTASLLVAQLLFLEAEDPDKDIQIYINSPGGSITAGMAIYDTMNYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEVMIHQPLGGTRGQAEDIRIHAERIVKLRDTLNKILVERTGQPLERVQKDTDRDFFMEAKEAKEYGIIDEVI 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_ACTSZ (ATP-dependent Clp protease proteolytic subunit OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=clpP PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.309e-37 Identity = 80/189 (42.33%), Postives = 121/189 (64.02%), Query Frame = -1 Query: 249 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 812 P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S D K + +YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG G R+A+P +R+ + P G RGQA DI+ A E+L+++ + + L+ +GQP E+I KD R ++EA YGLID ++ Sbjct: 5 PMVIEQTSRGERSY---DIYSRLLKERVIFLSGEVEDNMANLIVAQLLFLESEDPDKDINLYINSPGGSVTAGMAIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGAAGKRAALPNARVMIHQPLGGFRGQASDIQIHAQEILKIKHTLNERLAFHSGQPLEQIEKDTDRDNFMSAEEAQNYGLIDSVL 190
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP1_PROMM (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9313) GN=clpP1 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.309e-37 Identity = 84/205 (40.98%), Postives = 124/205 (60.49%), Query Frame = -1 Query: 249 PIRGRI-AMMPIGTPKVL---YRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 851 PI R + P+ +P +L G G + D+++ L RER+IF+G +D++ ++ ++A ML+L++ D K + +YIN PGG VT LAIYDTMQ + V T C G A + FLL GG KG R A+P +RI + P G A+GQA DI +A E+L +++ + L+ TGQP KI +D R +A+EYGLIDR++ Sbjct: 9 PIHNRWQGIRPVSSPGILPTVVEQSGRGERAF-DIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLNKIAEDTDRDHFLSPAKAVEYGLIDRVV 212
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_WHEAT (ATP-dependent Clp protease proteolytic subunit OS=Triticum aestivum GN=clpP PE=3 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 5.627e-37 Identity = 80/191 (41.88%), Postives = 116/191 (60.73%), Query Frame = -1 Query: 258 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLID 827 MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D ++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P +RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R + EA YGL+D Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYAVRTGKPFWVVSEDMERDVFMSADEAKAYGLVD 191
BLAST of CN186350 vs. ExPASy Swiss-Prot
Match: CLPP_RUBXD (ATP-dependent Clp protease proteolytic subunit OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=clpP PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.627e-37 Identity = 83/191 (43.46%), Postives = 125/191 (65.45%), Query Frame = -1 Query: 246 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPA-GAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 812 P V+ ++P GE + +D+++ L ++R+IF+G +D++ +N I+A +L+L+S D + + +YIN PGG V+ LAIYDTMQ +K + T +G A + FLLA G KG R A+P +RI L PA G GQA D+ A EL+R + + + LS TGQP++KI +D R G++EA+EYGLID I+R Sbjct: 11 PYVIEQSPRGERA---MDIYSRLLKDRIIFLGTPVDDQVANAIMAQLLHLESEDPEQDINLYINSPGGSVSAGLAIYDTMQFVKPDIVTTALGMAASMGAFLLAAGTKGKRFALPNTRILLHQPAVGGLAGQASDVEIHARELIRTKRRLNEILSEHTGQPYDKIERDTDRDFIMGAEEAIEYGLIDDIVR 198 The following BLAST results are available for this feature:
BLAST of CN186350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186350 ID=CN186350; Name=CN186350; organism=Citrus sinensis; type=EST; length=860bpback to top |